RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 KDELC2Q7Z4H8 507 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 RNF135Q8IUD6 432 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 KIRREL3Q8IZU9 778 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 SLAIN1Q8ND83 568 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 UBA3Q8TBC4 463 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 CALML6Q8TD86 181 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 USP33Q8TEY7 942 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 CASS4Q9NQ75 786 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 DDX4Q9NQI0 724 aaKnown RBP8.84□□□□□ -0.99
UBR4-206ENST00000419533 PCDHGB4Q9UN71 923 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 AFDNP55196 1824 aaKnown RBP8.84□□□□□ -0.99
UBR4-206ENST00000419533 SLC37A4O43826 429 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 TLR2O60603 784 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 SESN2P58004 480 aaPredicted RBP8.84□□□□□ -0.99
UBR4-206ENST00000419533 TRADDQ15628 312 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 HSP90AA5PQ58FG0 334 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 FAM133BQ5BKY9 247 aaKnown RBP8.84□□□□□ -0.99
UBR4-206ENST00000419533 USP13Q92995 863 aaPredicted RBP8.84□□□□□ -0.99
UBR4-206ENST00000419533 TMEM117Q9H0C3 514 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 FHOD1Q9Y613 1164 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 A0A1W2PQJ5 194 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 H0Y626 953 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 SMAPO00193 183 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 SYF2O95926 243 aaKnown RBP8.84□□□□□ -0.99
UBR4-206ENST00000419533 GARTP22102 1010 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 ATICP31939 592 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 ATN1P54259 1190 aaPredicted RBP8.84□□□□□ -0.99
UBR4-206ENST00000419533 KCNA1Q09470 495 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 CUL2Q13617 745 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 NAB2Q15742 525 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 MOB2Q70IA6 237 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 NUDCD3Q8IVD9 361 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 SLC26A7Q8TE54 656 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 RUBCNQ92622 972 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 AGO4Q9HCK5 861 aaKnown RBP8.84□□□□□ -0.99
UBR4-206ENST00000419533 AGPAT3Q9NRZ7 376 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 TSR3Q9UJK0 312 aaKnown RBP8.84□□□□□ -0.99
UBR4-206ENST00000419533 HPS5Q9UPZ3 1129 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.83□□□□□ -1
UBR4-206ENST00000419533 PPFIA2O75334 1257 aa8.83□□□□□ -1
UBR4-206ENST00000419533 THP07101 528 aa8.83□□□□□ -1
UBR4-206ENST00000419533 ARP10275 920 aa8.83□□□□□ -1
UBR4-206ENST00000419533 FDPSP14324 419 aaKnown RBP8.83□□□□□ -1
UBR4-206ENST00000419533 TWF1Q12792 350 aa8.83□□□□□ -1
UBR4-206ENST00000419533 ZNF177Q13360 481 aaPredicted RBP8.83□□□□□ -1
UBR4-206ENST00000419533 STAT4Q14765 748 aa8.83□□□□□ -1
UBR4-206ENST00000419533 C4orf19Q8IY42 314 aa8.83□□□□□ -1
UBR4-206ENST00000419533 SYTL5Q8TDW5 730 aaPredicted RBP8.83□□□□□ -1
UBR4-206ENST00000419533 TEKT4Q8WW24 435 aa8.83□□□□□ -1
UBR4-206ENST00000419533 DACT3Q96B18 629 aaPredicted RBP8.83□□□□□ -1
UBR4-206ENST00000419533 MTBPQ96DY7 904 aa8.83□□□□□ -1
UBR4-206ENST00000419533 PDCD2LQ9BRP1 358 aa8.83□□□□□ -1
UBR4-206ENST00000419533 RUSC1Q9BVN2 902 aa8.83□□□□□ -1
UBR4-206ENST00000419533 ACTR5Q9H9F9 607 aaPredicted RBP8.83□□□□□ -1
UBR4-206ENST00000419533 KLHL11Q9NVR0 708 aa8.83□□□□□ -1
UBR4-206ENST00000419533 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.83□□□□□ -17e-7■□□□□ 10.9
UBR4-206ENST00000419533 CLCA2Q9UQC9 943 aa8.83□□□□□ -1
UBR4-206ENST00000419533 IPPQ9Y573 584 aa8.83□□□□□ -1
UBR4-206ENST00000419533 ARHGAP10A1A4S6 786 aa8.83□□□□□ -1
UBR4-206ENST00000419533 KCNA2P16389 499 aa8.83□□□□□ -1
UBR4-206ENST00000419533 KCNA3P22001 575 aa8.83□□□□□ -1
UBR4-206ENST00000419533 KCNA4P22459 653 aa8.83□□□□□ -1
UBR4-206ENST00000419533 MRPS25P82663 173 aaKnown RBP8.83□□□□□ -1
UBR4-206ENST00000419533 WASHC5Q12768 1159 aa8.83□□□□□ -1
UBR4-206ENST00000419533 E2F4Q16254 413 aa8.83□□□□□ -1
UBR4-206ENST00000419533 KIZQ2M2Z5 673 aa8.83□□□□□ -1
UBR4-206ENST00000419533 CTXN3Q4LDR2 81 aa8.83□□□□□ -1
UBR4-206ENST00000419533 PAN2Q504Q3 1202 aaKnown RBP8.83□□□□□ -1
UBR4-206ENST00000419533 ZNF280DQ6N043 979 aa8.83□□□□□ -1
UBR4-206ENST00000419533 CATSPERGQ6ZRH7 1159 aa8.83□□□□□ -1
UBR4-206ENST00000419533 CLMNQ96JQ2 1002 aa8.83□□□□□ -1
UBR4-206ENST00000419533 AGAP3Q96P47 875 aa8.83□□□□□ -1
UBR4-206ENST00000419533 APBA2Q99767 749 aa8.83□□□□□ -1
UBR4-206ENST00000419533 ARHGEF38Q9NXL2 777 aa8.83□□□□□ -1
UBR4-206ENST00000419533 PAK5Q9P286 719 aa8.83□□□□□ -1
UBR4-206ENST00000419533 CACNA1FO60840 1977 aa8.83□□□□□ -1
UBR4-206ENST00000419533 CYB561D2O14569 222 aa8.83□□□□□ -1
UBR4-206ENST00000419533 PHF2O75151 1096 aa8.83□□□□□ -1
UBR4-206ENST00000419533 GRAP2O75791 330 aa8.83□□□□□ -1
UBR4-206ENST00000419533 AP1G2O75843 785 aa8.83□□□□□ -1
UBR4-206ENST00000419533 TMEM253P0C7T8 217 aa8.83□□□□□ -1
UBR4-206ENST00000419533 LHX1P48742 406 aa8.83□□□□□ -1
UBR4-206ENST00000419533 EPHB3P54753 998 aa8.83□□□□□ -1
UBR4-206ENST00000419533 RHBDL3P58872 404 aa8.83□□□□□ -1
UBR4-206ENST00000419533 EFTUD2Q15029 972 aaKnown RBP eCLIP8.83□□□□□ -16e-9■■■■□ 20.1
UBR4-206ENST00000419533 FAM110CQ1W6H9 321 aa8.83□□□□□ -1
UBR4-206ENST00000419533 RABGAP1LQ5R372 815 aa8.83□□□□□ -1
UBR4-206ENST00000419533 NOL9Q5SY16 702 aaKnown RBP8.83□□□□□ -1
UBR4-206ENST00000419533 LRRC37BQ96QE4 947 aa8.83□□□□□ -1
UBR4-206ENST00000419533 CYTH2Q99418 400 aa8.83□□□□□ -1
UBR4-206ENST00000419533 KIFC3Q9BVG8 833 aa8.83□□□□□ -1
UBR4-206ENST00000419533 CINPQ9BW66 212 aaPredicted RBP8.83□□□□□ -1
UBR4-206ENST00000419533 TSPYL2Q9H2G4 693 aaPredicted RBP8.83□□□□□ -1
UBR4-206ENST00000419533 COG4Q9H9E3 785 aa8.83□□□□□ -1
UBR4-206ENST00000419533 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.83□□□□□ -1
UBR4-206ENST00000419533 LAMB4A4D0S4 1761 aa8.83□□□□□ -1
UBR4-206ENST00000419533 H3BRB1 525 aa8.83□□□□□ -1
UBR4-206ENST00000419533 ZC3H11AO75152 810 aaKnown RBP eCLIP8.83□□□□□ -1
UBR4-206ENST00000419533 VTNP04004 478 aa8.83□□□□□ -1
UBR4-206ENST00000419533 VDRP11473 427 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms