RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 CES5AQ6NT32 575 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 TTI2Q6NXR4 508 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 TMC5Q6UXY8 1006 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 DPH6Q7L8W6 267 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 FAM186BQ8IYM0 893 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 TOP6BLQ8N6T0 577 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 FEZF2Q8TBJ5 459 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 SPATA18Q8TC71 538 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 ZNF707Q96C28 371 aaPredicted RBP11.3□□□□□ -0.6
RFC1-203ENST00000418436 DUSP9Q99956 384 aaKnown RBP11.3□□□□□ -0.6
RFC1-203ENST00000418436 RTP3Q9BQQ7 232 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 APOL5Q9BWW9 433 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 COL25A1Q9BXS0 654 aaPredicted RBP11.3□□□□□ -0.6
RFC1-203ENST00000418436 XYLT2Q9H1B5 865 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 VRTNQ9H8Y1 702 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 ZDHHC7Q9NXF8 308 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 MAFFQ9ULX9 164 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 L1RE1Q9UN81 338 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 VCANP13611 3396 aa11.3□□□□□ -0.6
RFC1-203ENST00000418436 A0A0C4DFX4 3053 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 CCDC195A0A1B0GUA6 201 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 GABRDO14764 452 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 SLC16A3O15427 465 aaKnown RBP11.29□□□□□ -0.6
RFC1-203ENST00000418436 HUS1O60921 280 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 VNN1O95497 513 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 VNN2O95498 520 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 ADH1BP00325 375 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 C8AP07357 584 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 POU2F2P09086 479 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 HNRNPA1P09651 372 aaKnown RBP eCLIP11.29□□□□□ -0.6
RFC1-203ENST00000418436 HOXA9P31269 272 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 ATICP31939 592 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 MTHFRP42898 656 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 ZP2Q05996 745 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 GPR17Q13304 367 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 SOWAHAQ2M3V2 549 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 ATAT1Q5SQI0 421 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 SV2AQ7L0J3 742 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 METTL23Q86XA0 190 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 ADHFE1Q8IWW8 467 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 TCEAL8Q8IYN2 117 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 TMEM86AQ8N2M4 240 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 PDCL2Q8N4E4 241 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 OR10T2Q8NGX3 314 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 NELFBQ8WX92 580 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 EEF2KMTQ96G04 330 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 RIPOR3Q96MK2 946 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 NECTIN4Q96NY8 510 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 PRKD2Q9BZL6 878 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 NUP62CLQ9H1M0 184 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 AFF4Q9UHB7 1163 aaKnown RBP11.29□□□□□ -0.6
RFC1-203ENST00000418436 CDH22Q9UJ99 828 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 R3HCC1Q9Y3T6 440 aaKnown RBP11.29□□□□□ -0.6
RFC1-203ENST00000418436 SNX9Q9Y5X1 595 aa11.29□□□□□ -0.6
RFC1-203ENST00000418436 DOCK6Q96HP0 2047 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 NOTCH4Q99466 2003 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 BICDL2A1A5D9 508 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 SEC24AO95486 1093 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 WEE2P0C1S8 567 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 FAM163BP0C2L3 166 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 TRIM49P0CI25 452 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 TRIM49CP0CI26 452 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 EPB41P11171 864 aaKnown RBP11.28□□□□□ -0.6
RFC1-203ENST00000418436 KRT13P13646 458 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 GTF2H1P32780 548 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 ARPP19P56211 112 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 MYL6P60660 151 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 PPP3CAQ08209 521 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 BIRC3Q13489 604 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 TRPC3Q13507 836 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 NCOA4Q13772 614 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 LIN9Q5TKA1 542 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 KLHL10Q6JEL2 608 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 RNF19BQ6ZMZ0 732 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 RBM43Q6ZSC3 357 aaKnown RBP11.28□□□□□ -0.6
RFC1-203ENST00000418436 CCDC149Q6ZUS6 474 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 FILIP1Q7Z7B0 1213 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 SCUBE3Q8IX30 993 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 THEM5Q8N1Q8 247 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 SLC7A14Q8TBB6 771 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 SYAP1Q96A49 352 aaPredicted RBP11.28□□□□□ -0.6
RFC1-203ENST00000418436 CEP63Q96MT8 703 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 NECAB3Q96P71 396 aaPredicted RBP11.28□□□□□ -0.6
RFC1-203ENST00000418436 TMEM209Q96SK2 561 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 UHRF1Q96T88 793 aaPredicted RBP11.28□□□□□ -0.6
RFC1-203ENST00000418436 PHF7Q9BWX1 381 aaPredicted RBP11.28□□□□□ -0.6
RFC1-203ENST00000418436 ZCWPW1Q9H0M4 648 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 POMKQ9H5K3 350 aa11.28□□□□□ -0.6
RFC1-203ENST00000418436 LOC730098B7Z3J9 87 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 PHACTR2O75167 634 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 TACC1O75410 805 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 OR4Q2P0C623 313 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 CPB1P15086 417 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 WARSP23381 471 aaKnown RBP11.27□□□□□ -0.61
RFC1-203ENST00000418436 GCLMP48507 274 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 LHX1P48742 406 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 ADCY1Q08828 1119 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 PAK1Q13153 545 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 SGSM1Q2NKQ1 1148 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 WDR72Q3MJ13 1102 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms