RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 BACE1P56817 501 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 STAT4Q14765 748 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 CDO1Q16878 200 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 GNPTABQ3T906 1256 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 SUPT20HL1Q3ZLR7 823 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 ZC3H18Q86VM9 953 aaKnown RBP12.54□□□□□ -0.4
LIMK1-202ENST00000418310 KATNAL2Q8IYT4 538 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 EXD1Q8NHP7 514 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 LRRC8CQ8TDW0 803 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 CFAP57Q96MR6 1250 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 IP6K2Q9UHH9 426 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 ZNF214Q9UL59 606 aaPredicted RBP12.54□□□□□ -0.4
LIMK1-202ENST00000418310 TCRBV7S3A2A0A539 114 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 CST8O60676 142 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 TJP3O95049 919 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 OAS1P00973 400 aaKnown RBP12.54□□□□□ -0.4
LIMK1-202ENST00000418310 OATP04181 439 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 GCAP28676 217 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 SLC8A1P32418 973 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 RFC1P35251 1148 aaPredicted RBP12.54□□□□□ -0.4
LIMK1-202ENST00000418310 OTUD4Q01804 1114 aaKnown RBP12.54□□□□□ -0.4
LIMK1-202ENST00000418310 CAPSQ13938 189 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 WDR78Q5VTH9 848 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 PLEKHA7Q6IQ23 1121 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 LVRNQ6Q4G3 990 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 ACTL9Q8TC94 416 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 SLCO2A1Q92959 643 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 MAGEB18Q96M61 343 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 FAM167BQ9BTA0 163 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 F5H423 210 aaPredicted RBP12.53□□□□□ -0.4
LIMK1-202ENST00000418310 MSH2P43246 934 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 CTCFP49711 727 aaPredicted RBP12.53□□□□□ -0.4
LIMK1-202ENST00000418310 PTP4A2Q12974 167 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 WDR72Q3MJ13 1102 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 MSS51Q4VC12 460 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 FAXCQ5TGI0 409 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 TRIM68Q6AZZ1 485 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 TRABD2AQ86V40 505 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 ZCCHC9Q8N567 271 aaKnown RBP12.53□□□□□ -0.4
LIMK1-202ENST00000418310 RNF149Q8NC42 400 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 PRPF31Q8WWY3 499 aaKnown RBP12.53□□□□□ -0.4
LIMK1-202ENST00000418310 MAK16Q9BXY0 300 aaKnown RBP12.53□□□□□ -0.4
LIMK1-202ENST00000418310 CHMP2BQ9UQN3 213 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 C2orf71A6NGG8 1288 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 GSTA1P08263 222 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 ADRA1DP25100 572 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 LACTBP83111 547 aaPredicted RBP12.53□□□□□ -0.4
LIMK1-202ENST00000418310 CAV1Q03135 178 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 BNIP1Q12981 228 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 DENND1BQ6P3S1 775 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 PPP1R21Q6ZMI0 780 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 ZNF280CQ8ND82 737 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 CGRRF1Q99675 332 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 TMEM191BP0C7N4 346 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 FGFR1P11362 822 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 MMP8P22894 467 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 GMPSP49915 693 aaPredicted RBP12.53□□□□□ -0.4
LIMK1-202ENST00000418310 GSCP56915 257 aaPredicted RBP12.53□□□□□ -0.4
LIMK1-202ENST00000418310 SESN3P58005 492 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 IGBP1P78318 339 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 MTFR1Q15390 333 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 RAB6CQ53S08 254 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 NPNTQ6UXI9 565 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 SYDE1Q6ZW31 735 aaPredicted RBP12.53□□□□□ -0.4
LIMK1-202ENST00000418310 ZNF677Q86XU0 584 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 FAM71DQ8N9W8 422 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 AGBL3Q8NEM8 1001 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 FBF1Q8TES7 1133 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 PYROXD1Q8WU10 500 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 MAML1Q92585 1016 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 RAB6CQ9H0N0 254 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 RXFP1Q9HBX9 757 aa12.53□□□□□ -0.4
LIMK1-202ENST00000418310 A0A0G2JND7 137 aa12.52□□□□□ -0.4
LIMK1-202ENST00000418310 TMEM191CA6NGB0 347 aa12.52□□□□□ -0.4
LIMK1-202ENST00000418310 INO80B-WBP1J3KQ70 363 aa12.52□□□□□ -0.4
LIMK1-202ENST00000418310 ZC3H11AO75152 810 aaKnown RBP eCLIP12.52□□□□□ -0.4
LIMK1-202ENST00000418310 STAM2O75886 525 aa12.52□□□□□ -0.4
LIMK1-202ENST00000418310 IL1R2P27930 398 aa12.52□□□□□ -0.4
LIMK1-202ENST00000418310 SETDB1Q15047 1291 aa12.52□□□□□ -0.4
LIMK1-202ENST00000418310 LY6KQ17RY6 165 aa12.52□□□□□ -0.4
LIMK1-202ENST00000418310 FNBP1LQ5T0N5 605 aa12.52□□□□□ -0.4
LIMK1-202ENST00000418310 RFX6Q8HWS3 928 aa12.52□□□□□ -0.4
LIMK1-202ENST00000418310 TMEM192Q8IY95 271 aa12.52□□□□□ -0.4
LIMK1-202ENST00000418310 RSAD2Q8WXG1 361 aa12.52□□□□□ -0.4
LIMK1-202ENST00000418310 CNKSR2Q8WXI2 1034 aa12.52□□□□□ -0.4
LIMK1-202ENST00000418310 RBM41Q96IZ5 413 aaKnown RBP12.52□□□□□ -0.4
LIMK1-202ENST00000418310 INO80BQ9C086 356 aaPredicted RBP12.52□□□□□ -0.4
LIMK1-202ENST00000418310 R3HDMLQ9H3Y0 253 aa12.52□□□□□ -0.4
LIMK1-202ENST00000418310 ACAD9Q9H845 621 aa12.52□□□□□ -0.4
LIMK1-202ENST00000418310 C17orf75Q9HAS0 396 aa12.52□□□□□ -0.4
LIMK1-202ENST00000418310 UBN1Q9NPG3 1134 aa12.52□□□□□ -0.4
LIMK1-202ENST00000418310 PDLIM7Q9NR12 457 aa12.52□□□□□ -0.4
LIMK1-202ENST00000418310 B4GALT5O43286 388 aa12.52□□□□□ -0.41
LIMK1-202ENST00000418310 ITGBL1O95965 494 aaPredicted RBP12.52□□□□□ -0.41
LIMK1-202ENST00000418310 TNFAIP1Q13829 316 aa12.52□□□□□ -0.41
LIMK1-202ENST00000418310 SPARCL1Q14515 664 aa12.52□□□□□ -0.41
LIMK1-202ENST00000418310 HIF1AQ16665 826 aa12.52□□□□□ -0.41
LIMK1-202ENST00000418310 C3orf62Q6ZUJ4 267 aa12.52□□□□□ -0.41
LIMK1-202ENST00000418310 CENPUQ71F23 418 aa12.52□□□□□ -0.41
LIMK1-202ENST00000418310 PORCNQ9H237 461 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms