RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 PRPF6O94906 941 aaKnown RBP15.23■□□□□ 0.03
LINC01006-202ENST00000418309 ITGB3P05106 788 aa15.23■□□□□ 0.03
LINC01006-202ENST00000418309 KRT19P08727 400 aa15.23■□□□□ 0.03
LINC01006-202ENST00000418309 TSPY1Q01534 308 aa15.23■□□□□ 0.03
LINC01006-202ENST00000418309 BRSK2Q8IWQ3 736 aa15.23■□□□□ 0.03
LINC01006-202ENST00000418309 TTC8Q8TAM2 541 aa15.23■□□□□ 0.03
LINC01006-202ENST00000418309 RUBCNQ92622 972 aa15.23■□□□□ 0.03
LINC01006-202ENST00000418309 BORCS6Q96GS4 357 aa15.23■□□□□ 0.03
LINC01006-202ENST00000418309 BACH2Q9BYV9 841 aa15.23■□□□□ 0.03
LINC01006-202ENST00000418309 TMEM206Q9H813 350 aa15.23■□□□□ 0.03
LINC01006-202ENST00000418309 ZSCAN32Q9NX65 697 aa15.23■□□□□ 0.03
LINC01006-202ENST00000418309 TFIP11Q9UBB9 837 aaKnown RBP15.23■□□□□ 0.03
LINC01006-202ENST00000418309 R3HCC1Q9Y3T6 440 aaKnown RBP15.23■□□□□ 0.03
LINC01006-202ENST00000418309 PCDHB5Q9Y5E4 795 aa15.23■□□□□ 0.03
LINC01006-202ENST00000418309 PCDHGA2Q9Y5H1 932 aa15.23■□□□□ 0.03
LINC01006-202ENST00000418309 F5P12259 2224 aa15.23■□□□□ 0.03
LINC01006-202ENST00000418309 DMDP11532 3685 aa15.22■□□□□ 0.03
LINC01006-202ENST00000418309 SLC38A8A6NNN8 435 aa15.22■□□□□ 0.03
LINC01006-202ENST00000418309 SPTLC2O15270 562 aa15.22■□□□□ 0.03
LINC01006-202ENST00000418309 EXTL3O43909 919 aa15.22■□□□□ 0.03
LINC01006-202ENST00000418309 HUS1O60921 280 aa15.22■□□□□ 0.03
LINC01006-202ENST00000418309 HAPLN1P10915 354 aaPredicted RBP15.22■□□□□ 0.03
LINC01006-202ENST00000418309 ATF6P18850 670 aa15.22■□□□□ 0.03
LINC01006-202ENST00000418309 CDC25CP30307 473 aa15.22■□□□□ 0.03
LINC01006-202ENST00000418309 NASPP49321 788 aaPredicted RBP15.22■□□□□ 0.03
LINC01006-202ENST00000418309 WNT7BP56706 349 aa15.22■□□□□ 0.03
LINC01006-202ENST00000418309 CYP4F8P98187 520 aa15.22■□□□□ 0.03
LINC01006-202ENST00000418309 BFSP1Q12934 665 aa15.22■□□□□ 0.03
LINC01006-202ENST00000418309 PPP2R5DQ14738 602 aa15.22■□□□□ 0.03
LINC01006-202ENST00000418309 STXBP4Q6ZWJ1 553 aa15.22■□□□□ 0.03
LINC01006-202ENST00000418309 DCLK2Q8N568 766 aa15.22■□□□□ 0.03
LINC01006-202ENST00000418309 C1orf127Q8N9H9 656 aa15.22■□□□□ 0.03
LINC01006-202ENST00000418309 ZFYVE19Q96K21 471 aa15.22■□□□□ 0.03
LINC01006-202ENST00000418309 ZNF396Q96N95 335 aaPredicted RBP15.22■□□□□ 0.03
LINC01006-202ENST00000418309 CBWD1Q9BRT8 395 aa15.22■□□□□ 0.03
LINC01006-202ENST00000418309 MKNK1Q9BUB5 465 aa15.22■□□□□ 0.03
LINC01006-202ENST00000418309 FGFBP2Q9BYJ0 223 aa15.22■□□□□ 0.03
LINC01006-202ENST00000418309 LRRC27Q9C0I9 530 aa15.22■□□□□ 0.03
LINC01006-202ENST00000418309 CHRDQ9H2X0 955 aa15.22■□□□□ 0.03
LINC01006-202ENST00000418309 TASP1Q9H6P5 420 aa15.22■□□□□ 0.03
LINC01006-202ENST00000418309 C8orf33Q9H7E9 229 aaPredicted RBP15.22■□□□□ 0.03
LINC01006-202ENST00000418309 MORC2Q9Y6X9 1032 aaPredicted RBP15.22■□□□□ 0.03
LINC01006-202ENST00000418309 EP300Q09472 2414 aaPredicted RBP15.21■□□□□ 0.03
LINC01006-202ENST00000418309 FRMD3A2A2Y4 597 aa15.21■□□□□ 0.03
LINC01006-202ENST00000418309 PRPF40AO75400 957 aaKnown RBP15.21■□□□□ 0.03
LINC01006-202ENST00000418309 TMEM191BP0C7N4 346 aa15.21■□□□□ 0.03
LINC01006-202ENST00000418309 SOX9P48436 509 aa15.21■□□□□ 0.03
LINC01006-202ENST00000418309 FCHO2Q0JRZ9 810 aa15.21■□□□□ 0.03
LINC01006-202ENST00000418309 ARHGAP29Q52LW3 1261 aa15.21■□□□□ 0.03
LINC01006-202ENST00000418309 FOXD4L5Q5VV16 416 aaPredicted RBP15.21■□□□□ 0.03
LINC01006-202ENST00000418309 ZNF687Q8N1G0 1237 aa15.21■□□□□ 0.03
LINC01006-202ENST00000418309 GPD1LQ8N335 351 aa15.21■□□□□ 0.03
LINC01006-202ENST00000418309 PDCL2Q8N4E4 241 aa15.21■□□□□ 0.03
LINC01006-202ENST00000418309 SUMF1Q8NBK3 374 aa15.21■□□□□ 0.03
LINC01006-202ENST00000418309 LINC00301Q8NCQ3 95 aa15.21■□□□□ 0.03
LINC01006-202ENST00000418309 FOXD4L4Q8WXT5 416 aaPredicted RBP15.21■□□□□ 0.03
LINC01006-202ENST00000418309 PI4K2AQ9BTU6 479 aa15.21■□□□□ 0.03
LINC01006-202ENST00000418309 PDE11AQ9HCR9 933 aa15.21■□□□□ 0.03
LINC01006-202ENST00000418309 DDX43Q9NXZ2 648 aaKnown RBP15.21■□□□□ 0.03
LINC01006-202ENST00000418309 NCDNQ9UBB6 729 aa15.21■□□□□ 0.03
LINC01006-202ENST00000418309 ITGA11Q9UKX5 1188 aa15.21■□□□□ 0.03
LINC01006-202ENST00000418309 MAGED2Q9UNF1 606 aaPredicted RBP15.21■□□□□ 0.03
LINC01006-202ENST00000418309 SPTBN4Q9H254 2564 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 ARNTLO00327 626 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 NRLP54845 237 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 MLLT6P55198 1093 aaPredicted RBP15.2■□□□□ 0.02
LINC01006-202ENST00000418309 RBP5P82980 135 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 AMPD3Q01432 767 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 MYL7Q01449 175 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 NFE2Q16621 373 aaPredicted RBP15.2■□□□□ 0.02
LINC01006-202ENST00000418309 C1orf228Q6PIY5 440 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 LRRC52Q8N7C0 313 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 ZBTB44Q8NCP5 570 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 BPIFB1Q8TDL5 484 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 HPS3Q969F9 1004 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 MSANTD3Q96H12 275 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 ANKRD36BP1Q96IX9 119 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 FAM84AQ96KN4 292 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 LRRC3BQ96PB8 259 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 IER2Q9BTL4 223 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 SLC46A2Q9BY10 475 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 MTMR12Q9C0I1 747 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 SMG9Q9H0W8 520 aaKnown RBP15.2■□□□□ 0.02
LINC01006-202ENST00000418309 TNMDQ9H2S6 317 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 IL21Q9HBE4 155 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 PRMT8Q9NR22 394 aaPredicted RBP15.2■□□□□ 0.02
LINC01006-202ENST00000418309 TMLHEQ9NVH6 421 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 THG1LQ9NWX6 298 aaKnown RBP15.2■□□□□ 0.02
LINC01006-202ENST00000418309 OBP2AQ9NY56 170 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 GTSE1Q9NYZ3 720 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 L1RE1Q9UN81 338 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 SNX9Q9Y5X1 595 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 COL4A2P08572 1712 aa15.2■□□□□ 0.02
LINC01006-202ENST00000418309 NUP210Q8TEM1 1887 aaPredicted RBP15.19■□□□□ 0.02
LINC01006-202ENST00000418309 ZNF638Q14966 1978 aaKnown RBP15.19■□□□□ 0.02
LINC01006-202ENST00000418309 ZNF233A6NK53 670 aa15.19■□□□□ 0.02
LINC01006-202ENST00000418309 SPECC1L-ADORA2AF8WAN1 911 aa15.19■□□□□ 0.02
LINC01006-202ENST00000418309 KIAA0391O15091 583 aaKnown RBP15.19■□□□□ 0.02
LINC01006-202ENST00000418309 PPP6R2O75170 966 aa15.19■□□□□ 0.02
LINC01006-202ENST00000418309 PRAMEF12O95522 483 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms