RNA–Protein interactions for RNA: ENST00000417478.6

RUFY3-203, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-203ENST00000417478 RAP1GAPP47736 663 aa21.35■■□□□ 1.01
RUFY3-203ENST00000417478 LONRF2Q1L5Z9 754 aa21.35■■□□□ 1.01
RUFY3-203ENST00000417478 ZNF667Q5HYK9 610 aa21.35■■□□□ 1.01
RUFY3-203ENST00000417478 UBE2Q2Q8WVN8 375 aa21.35■■□□□ 1.01
RUFY3-203ENST00000417478 PGBD4Q96DM1 585 aa21.35■■□□□ 1.01
RUFY3-203ENST00000417478 RNF216Q9NWF9 866 aaPredicted RBP21.35■■□□□ 1.01
RUFY3-203ENST00000417478 FAM53CQ9NYF3 392 aa21.35■■□□□ 1.01
RUFY3-203ENST00000417478 COG5Q9UP83 839 aa21.35■■□□□ 1.01
RUFY3-203ENST00000417478 CNTN6Q9UQ52 1028 aa21.35■■□□□ 1.01
RUFY3-203ENST00000417478 CD58P19256 250 aa21.35■■□□□ 1.01
RUFY3-203ENST00000417478 IGFBP6P24592 240 aaPredicted RBP21.35■■□□□ 1.01
RUFY3-203ENST00000417478 CLEC16AQ2KHT3 1053 aa21.35■■□□□ 1.01
RUFY3-203ENST00000417478 ACAD10Q6JQN1 1059 aa21.35■■□□□ 1.01
RUFY3-203ENST00000417478 C11orf63Q6NUN7 778 aa21.35■■□□□ 1.01
RUFY3-203ENST00000417478 GTF3C4Q9UKN8 822 aa21.35■■□□□ 1.01
RUFY3-203ENST00000417478 THP07101 528 aa21.34■■□□□ 1.01
RUFY3-203ENST00000417478 FGFR1P11362 822 aa21.34■■□□□ 1.01
RUFY3-203ENST00000417478 ATICP31939 592 aa21.34■■□□□ 1.01
RUFY3-203ENST00000417478 CDH8P55286 799 aa21.34■■□□□ 1.01
RUFY3-203ENST00000417478 ACTRT1Q8TDG2 376 aa21.34■■□□□ 1.01
RUFY3-203ENST00000417478 SDCBP2Q9H190 292 aa21.34■■□□□ 1.01
RUFY3-203ENST00000417478 SMYD3Q9H7B4 428 aa21.34■■□□□ 1.01
RUFY3-203ENST00000417478 PIRO00625 290 aa21.34■■□□□ 1.01
RUFY3-203ENST00000417478 CYP1A2P05177 515 aa21.34■■□□□ 1.01
RUFY3-203ENST00000417478 GLE1Q53GS7 698 aaKnown RBP21.34■■□□□ 1.01
RUFY3-203ENST00000417478 CLLU1OSQ5K130 101 aa21.34■■□□□ 1.01
RUFY3-203ENST00000417478 BEND6Q5SZJ8 279 aaPredicted RBP21.34■■□□□ 1.01
RUFY3-203ENST00000417478 TMEM270Q6UE05 265 aa21.34■■□□□ 1.01
RUFY3-203ENST00000417478 TSPAN18Q96SJ8 248 aa21.34■■□□□ 1.01
RUFY3-203ENST00000417478 VRTNQ9H8Y1 702 aa21.34■■□□□ 1.01
RUFY3-203ENST00000417478 RBM12Q9NTZ6 932 aaKnown RBP21.34■■□□□ 1.01
RUFY3-203ENST00000417478 PCDHB4Q9Y5E5 795 aa21.34■■□□□ 1.01
RUFY3-203ENST00000417478 XPOTO43592 962 aaKnown RBP21.33■■□□□ 1.01
RUFY3-203ENST00000417478 EOMESO95936 686 aa21.33■■□□□ 1.01
RUFY3-203ENST00000417478 CYP3A5P20815 502 aa21.33■■□□□ 1.01
RUFY3-203ENST00000417478 UBR7Q8N806 425 aa21.33■■□□□ 1.01
RUFY3-203ENST00000417478 APBB2Q92870 758 aa21.33■■□□□ 1.01
RUFY3-203ENST00000417478 CISHQ9NSE2 258 aa21.33■■□□□ 1.01
RUFY3-203ENST00000417478 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.32■■□□□ 1
RUFY3-203ENST00000417478 FAM170AA1A519 330 aa21.32■■□□□ 1
RUFY3-203ENST00000417478 SPTLC1O15269 473 aa21.32■■□□□ 1
RUFY3-203ENST00000417478 CAPN2P17655 700 aa21.32■■□□□ 1
RUFY3-203ENST00000417478 MYO1EQ12965 1108 aa21.32■■□□□ 1
RUFY3-203ENST00000417478 TRIM72Q6ZMU5 477 aa21.32■■□□□ 1
RUFY3-203ENST00000417478 ZNF653Q96CK0 615 aa21.32■■□□□ 1
RUFY3-203ENST00000417478 PAAF1Q9BRP4 392 aa21.32■■□□□ 1
RUFY3-203ENST00000417478 UVRAGQ9P2Y5 699 aa21.32■■□□□ 1
RUFY3-203ENST00000417478 SPDYE4A6NLX3 237 aa21.32■■□□□ 1
RUFY3-203ENST00000417478 CEP104O60308 925 aa21.32■■□□□ 1
RUFY3-203ENST00000417478 PARNO95453 639 aaKnown RBP21.32■■□□□ 1
RUFY3-203ENST00000417478 TIMP1P01033 207 aa21.32■■□□□ 1
RUFY3-203ENST00000417478 UNGP13051 313 aaPredicted RBP21.32■■□□□ 1
RUFY3-203ENST00000417478 MAP9Q49MG5 647 aa21.32■■□□□ 1
RUFY3-203ENST00000417478 RASGEF1CQ8N431 466 aa21.32■■□□□ 1
RUFY3-203ENST00000417478 LRRC1Q9BTT6 524 aa21.32■■□□□ 1
RUFY3-203ENST00000417478 BCO2Q9BYV7 579 aa21.32■■□□□ 1
RUFY3-203ENST00000417478 UBN1Q9NPG3 1134 aa21.32■■□□□ 1
RUFY3-203ENST00000417478 CASTOR2A6NHX0 329 aa21.31■■□□□ 1
RUFY3-203ENST00000417478 KIAA0355O15063 1070 aa21.31■■□□□ 1
RUFY3-203ENST00000417478 STAU1O95793 577 aaKnown RBP21.31■■□□□ 1
RUFY3-203ENST00000417478 PTPROQ16827 1216 aa21.31■■□□□ 1
RUFY3-203ENST00000417478 ZNF394Q53GI3 561 aa21.31■■□□□ 1
RUFY3-203ENST00000417478 C8orf74Q6P047 294 aa21.31■■□□□ 1
RUFY3-203ENST00000417478 LRRC52Q8N7C0 313 aa21.31■■□□□ 1
RUFY3-203ENST00000417478 RBBP8NLQ8NC74 664 aaPredicted RBP21.31■■□□□ 1
RUFY3-203ENST00000417478 TRIM11Q96F44 468 aa21.31■■□□□ 1
RUFY3-203ENST00000417478 FUT8Q9BYC5 575 aa21.31■■□□□ 1
RUFY3-203ENST00000417478 SLC38A7Q9NVC3 462 aa21.31■■□□□ 1
RUFY3-203ENST00000417478 TMEM161AQ9NX61 479 aa21.31■■□□□ 1
RUFY3-203ENST00000417478 TMEM59LQ9UK28 342 aa21.31■■□□□ 1
RUFY3-203ENST00000417478 SNX9Q9Y5X1 595 aa21.31■■□□□ 1
RUFY3-203ENST00000417478 PGRMC1O00264 195 aaKnown RBP21.31■■□□□ 1
RUFY3-203ENST00000417478 CSF2RAP15509 400 aa21.31■■□□□ 1
RUFY3-203ENST00000417478 RAG1P15918 1043 aa21.31■■□□□ 1
RUFY3-203ENST00000417478 LRPAP1P30533 357 aa21.31■■□□□ 1
RUFY3-203ENST00000417478 CLCNKBP51801 687 aa21.31■■□□□ 1
RUFY3-203ENST00000417478 GLB1LQ6UWU2 654 aa21.31■■□□□ 1
RUFY3-203ENST00000417478 KRT222Q8N1A0 295 aa21.31■■□□□ 1
RUFY3-203ENST00000417478 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.31■■□□□ 13e-6■■■■■ 30.2
RUFY3-203ENST00000417478 MIF4GDA9UHW6 222 aaKnown RBP21.3■■□□□ 1
RUFY3-203ENST00000417478 DDX3YO15523 660 aaKnown RBP21.3■■□□□ 1
RUFY3-203ENST00000417478 CYP1A1P04798 512 aaPredicted RBP21.3■■□□□ 1
RUFY3-203ENST00000417478 MYBL1P10243 752 aa21.3■■□□□ 1
RUFY3-203ENST00000417478 GNA15P30679 374 aa21.3■■□□□ 1
RUFY3-203ENST00000417478 GATMP50440 423 aa21.3■■□□□ 1
RUFY3-203ENST00000417478 ZNF132P52740 706 aa21.3■■□□□ 1
RUFY3-203ENST00000417478 TNNC1P63316 161 aa21.3■■□□□ 1
RUFY3-203ENST00000417478 PPP1R2P3Q6NXS1 205 aa21.3■■□□□ 1
RUFY3-203ENST00000417478 ZNF564Q8TBZ8 553 aaPredicted RBP21.3■■□□□ 1
RUFY3-203ENST00000417478 NUP85Q9BW27 656 aa21.3■■□□□ 1
RUFY3-203ENST00000417478 HMGXB4Q9UGU5 601 aa21.3■■□□□ 1
RUFY3-203ENST00000417478 TTC7AQ9ULT0 858 aaPredicted RBP21.3■■□□□ 1
RUFY3-203ENST00000417478 L1RE1Q9UN81 338 aa21.3■■□□□ 1
RUFY3-203ENST00000417478 ALG6Q9Y672 507 aa21.3■■□□□ 1
RUFY3-203ENST00000417478 B4GALT3O60512 393 aa21.29■■□□□ 1
RUFY3-203ENST00000417478 ORC1Q13415 861 aa21.29■■□□□ 1
RUFY3-203ENST00000417478 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.29■■□□□ 1
RUFY3-203ENST00000417478 C3orf58Q8NDZ4 430 aa21.29■■□□□ 1
RUFY3-203ENST00000417478 CARD9Q9H257 536 aa21.29■■□□□ 1
RUFY3-203ENST00000417478 PCDHB7Q9Y5E2 793 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms