RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 SNTG2Q9NY99 539 aa9.88□□□□□ -0.83
CHRNA1-206ENST00000416004 AIPL1Q9NZN9 384 aa9.88□□□□□ -0.83
CHRNA1-206ENST00000416004 BARX2Q9UMQ3 279 aaPredicted RBP9.88□□□□□ -0.83
CHRNA1-206ENST00000416004 REXO2Q9Y3B8 237 aaKnown RBP9.88□□□□□ -0.83
CHRNA1-206ENST00000416004 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.88□□□□□ -0.83
CHRNA1-206ENST00000416004 IRAK3Q9Y616 596 aa9.88□□□□□ -0.83
CHRNA1-206ENST00000416004 MYO7AQ13402 2215 aa9.88□□□□□ -0.83
CHRNA1-206ENST00000416004 CITO14578 2027 aa9.88□□□□□ -0.83
CHRNA1-206ENST00000416004 PRUNE2Q8WUY3 3088 aa9.88□□□□□ -0.83
CHRNA1-206ENST00000416004 SF3B1O75533 1304 aaKnown RBP eCLIP9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 HIDE1A8MVS5 230 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 TRAPPC3O43617 180 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 TBX10O75333 385 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 RECQL4O94761 1208 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 CST3P01034 146 aaPredicted RBP9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 ALADP13716 330 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 PIK3CAP42336 1068 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 ITIH3Q06033 890 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 USP41Q3LFD5 358 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 JADE1Q6IE81 842 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 ANKRD54Q6NXT1 300 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 TMEM184AQ6ZMB5 413 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 TRAPPC11Q7Z392 1133 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 PPP1R13BQ96KQ4 1090 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 RIPOR3Q96MK2 946 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 NECTIN4Q96NY8 510 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 ACAP3Q96P50 834 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 NECAB3Q96P71 396 aaPredicted RBP9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 HERC2P3Q9BVR0 1158 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 APOBEC3GQ9HC16 384 aaKnown RBP9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 KCND1Q9NSA2 647 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 ADAM28Q9UKQ2 775 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 PPP2R2CQ9Y2T4 447 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 PCDHGC5Q9Y5F6 944 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 ADGRG1Q9Y653 693 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 FOXN3O00409 490 aaPredicted RBP9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 C2CD2LO14523 706 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 ZNF263O14978 683 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 GFPT2O94808 682 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 IL18RAPO95256 599 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 NDUFA10O95299 355 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 SOX5P35711 763 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 LTBRP36941 435 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 EIF4A3P38919 411 aaKnown RBP9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 GUCY2FP51841 1108 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 NCOA4Q13772 614 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 ASIC2Q16515 512 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 DUOXA2Q1HG44 320 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 ASTE1Q2TB18 679 aaPredicted RBP9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 REXO1L1PQ8IX06 675 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 PPM1KQ8N3J5 372 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 SMRP1Q8NCR6 262 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 CXorf38Q8TB03 319 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 ZMAT2Q96NC0 199 aaKnown RBP9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 NUCKS1Q9H1E3 243 aaKnown RBP9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 MYO6Q9UM54 1294 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 NR2E1Q9Y466 385 aa9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 EPN1Q9Y6I3 576 aaPredicted RBP9.87□□□□□ -0.83
CHRNA1-206ENST00000416004 BRWD1Q9NSI6 2320 aa9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 XPOTO43592 962 aaKnown RBP9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 CLASP2O75122 1294 aaKnown RBP9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 PHACTR2O75167 634 aa9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 SERPING1P05155 500 aa9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 CHRM1P11229 460 aaPredicted RBP9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 HOXD11P31277 338 aaPredicted RBP9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 MTHFRP42898 656 aa9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 MYL6P60660 151 aa9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 DLX2Q07687 328 aaPredicted RBP9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 DSC1Q08554 894 aa9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 SURF1Q15526 300 aa9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 FUT10Q6P4F1 479 aa9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 C1orf127Q8N9H9 656 aa9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 OLIG1Q8TAK6 271 aa9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 DDX27Q96GQ7 796 aaKnown RBP9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 MSLNLQ96KJ4 702 aa9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 SNX27Q96L92 541 aa9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 NT5C1BQ96P26 610 aa9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 CLEC1BQ9P126 229 aa9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 SIX4Q9UIU6 781 aa9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 TFR2Q9UP52 801 aa9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 NUB1Q9Y5A7 615 aa9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 HCFC2Q9Y5Z7 792 aa9.86□□□□□ -0.83
CHRNA1-206ENST00000416004 ASS1P00966 412 aaKnown RBP9.85□□□□□ -0.83
CHRNA1-206ENST00000416004 TMEM191BP0C7N4 346 aa9.85□□□□□ -0.83
CHRNA1-206ENST00000416004 RFX1P22670 979 aa9.85□□□□□ -0.83
CHRNA1-206ENST00000416004 STAT1P42224 750 aa9.85□□□□□ -0.83
CHRNA1-206ENST00000416004 AP3M2P53677 418 aa9.85□□□□□ -0.83
CHRNA1-206ENST00000416004 NOP14P78316 857 aaKnown RBP9.85□□□□□ -0.83
CHRNA1-206ENST00000416004 POU5F1Q01860 360 aaKnown RBP9.85□□□□□ -0.83
CHRNA1-206ENST00000416004 CYP27A1Q02318 531 aa9.85□□□□□ -0.83
CHRNA1-206ENST00000416004 PTK2Q05397 1052 aa9.85□□□□□ -0.83
CHRNA1-206ENST00000416004 KLHL30Q0D2K2 578 aa9.85□□□□□ -0.83
CHRNA1-206ENST00000416004 PTPN14Q15678 1187 aa9.85□□□□□ -0.83
CHRNA1-206ENST00000416004 TDRD12Q587J7 1177 aaKnown RBP9.85□□□□□ -0.83
CHRNA1-206ENST00000416004 ATAT1Q5SQI0 421 aa9.85□□□□□ -0.83
CHRNA1-206ENST00000416004 ZNF571Q7Z3V5 609 aaPredicted RBP9.85□□□□□ -0.83
CHRNA1-206ENST00000416004 TMEM173Q86WV6 379 aaPredicted RBP9.85□□□□□ -0.83
CHRNA1-206ENST00000416004 GPR65Q8IYL9 337 aa9.85□□□□□ -0.83
CHRNA1-206ENST00000416004 SHC3Q92529 594 aa9.85□□□□□ -0.83
CHRNA1-206ENST00000416004 PHF7Q9BWX1 381 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms