RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 DDX27Q96GQ7 796 aaKnown RBP14.61□□□□□ -0.07
CPNE1-209ENST00000415920 PCMTD1Q96MG8 357 aaPredicted RBP14.61□□□□□ -0.07
CPNE1-209ENST00000415920 CRACR2AQ9BSW2 395 aa14.61□□□□□ -0.07
CPNE1-209ENST00000415920 PI4K2AQ9BTU6 479 aa14.61□□□□□ -0.07
CPNE1-209ENST00000415920 SFXN1Q9H9B4 322 aa14.61□□□□□ -0.07
CPNE1-209ENST00000415920 USTQ9Y2C2 406 aa14.61□□□□□ -0.07
CPNE1-209ENST00000415920 FAN1Q9Y2M0 1017 aa14.61□□□□□ -0.07
CPNE1-209ENST00000415920 PTPRZ1P23471 2315 aaPredicted RBP14.6□□□□□ -0.07
CPNE1-209ENST00000415920 SPTBN4Q9H254 2564 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 ANO9A1A5B4 782 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 GOLGA6L3A6NEY3 463 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 P4HA2O15460 535 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 TPM3P06753 285 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 KLRC2P26717 231 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 PNPLA4P41247 253 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 NUBP1P53384 320 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 UBASH3AP57075 661 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 TNNC1P63316 161 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 UBXN1Q04323 297 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 MYO1EQ12965 1108 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 BMS1Q14692 1282 aaKnown RBP14.6□□□□□ -0.07
CPNE1-209ENST00000415920 SPOPLQ6IQ16 392 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 GBP6Q6ZN66 633 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 CCDC149Q6ZUS6 474 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 LRRC52Q8N7C0 313 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 RSAD2Q8WXG1 361 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 SEMA4DQ92854 862 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 HPDLQ96IR7 371 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 INTS2Q9H0H0 1204 aaKnown RBP14.6□□□□□ -0.07
CPNE1-209ENST00000415920 MFSD1Q9H3U5 465 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 KCNK12Q9HB15 430 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 RAB20Q9NX57 234 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 PTPRDP23468 1912 aa14.6□□□□□ -0.07
CPNE1-209ENST00000415920 RIF1Q5UIP0 2472 aaKnown RBP14.59□□□□□ -0.07
CPNE1-209ENST00000415920 A0A1B0GTH6 734 aa14.59□□□□□ -0.07
CPNE1-209ENST00000415920 TMEM189-UBE2V1I3L0A0 370 aa14.59□□□□□ -0.07
CPNE1-209ENST00000415920 I3L4J1 428 aa14.59□□□□□ -0.07
CPNE1-209ENST00000415920 PIRO00625 290 aa14.59□□□□□ -0.07
CPNE1-209ENST00000415920 CBFA2T2O43439 604 aa14.59□□□□□ -0.07
CPNE1-209ENST00000415920 LRRN2O75325 713 aa14.59□□□□□ -0.07
CPNE1-209ENST00000415920 BRCC3P46736 316 aa14.59□□□□□ -0.07
CPNE1-209ENST00000415920 LRMPQ12912 555 aa14.59□□□□□ -0.07
CPNE1-209ENST00000415920 EXOC3L4Q17RC7 722 aa14.59□□□□□ -0.07
CPNE1-209ENST00000415920 ZNF667Q5HYK9 610 aa14.59□□□□□ -0.07
CPNE1-209ENST00000415920 PLCD3Q8N3E9 789 aa14.59□□□□□ -0.07
CPNE1-209ENST00000415920 ST13P5Q8NFI4 369 aaPredicted RBP14.59□□□□□ -0.07
CPNE1-209ENST00000415920 CXorf38Q8TB03 319 aa14.59□□□□□ -0.07
CPNE1-209ENST00000415920 B3GALT6Q96L58 329 aa14.59□□□□□ -0.07
CPNE1-209ENST00000415920 COLEC11Q9BWP8 271 aa14.59□□□□□ -0.07
CPNE1-209ENST00000415920 LSM14BQ9BX40 385 aaKnown RBP14.59□□□□□ -0.07
CPNE1-209ENST00000415920 XPO4Q9C0E2 1151 aaKnown RBP14.59□□□□□ -0.07
CPNE1-209ENST00000415920 IRF2BPLQ9H1B7 796 aa14.59□□□□□ -0.07
CPNE1-209ENST00000415920 MAN1C1Q9NR34 630 aa14.59□□□□□ -0.07
CPNE1-209ENST00000415920 NXF1Q9UBU9 619 aaKnown RBP14.59□□□□□ -0.07
CPNE1-209ENST00000415920 ADAM28Q9UKQ2 775 aa14.59□□□□□ -0.07
CPNE1-209ENST00000415920 SF3B1O75533 1304 aaKnown RBP eCLIP14.59□□□□□ -0.079e-6■■■■■ 68.9
CPNE1-209ENST00000415920 DOCK8Q8NF50 2099 aa14.59□□□□□ -0.07
CPNE1-209ENST00000415920 FAM186AA6NE01 2351 aa14.59□□□□□ -0.07
CPNE1-209ENST00000415920 GTPBP10A4D1E9 387 aaKnown RBP14.58□□□□□ -0.08
CPNE1-209ENST00000415920 SPDYE4A6NLX3 237 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 SPTLC1O15269 473 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 TEX28O15482 410 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 TEX33O43247 280 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 TADA2AO75478 443 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 RFPL2O75678 378 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 EFEMP2O95967 443 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 ASS1P00966 412 aaKnown RBP14.58□□□□□ -0.08
CPNE1-209ENST00000415920 CST3P01034 146 aaPredicted RBP14.58□□□□□ -0.08
CPNE1-209ENST00000415920 ALDH2P05091 517 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 SPATA31D3P0C874 917 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 IGFBP6P24592 240 aaPredicted RBP14.58□□□□□ -0.08
CPNE1-209ENST00000415920 CLCN5P51795 746 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 MCCD1P59942 119 aaPredicted RBP14.58□□□□□ -0.08
CPNE1-209ENST00000415920 TDGQ13569 410 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 SYCP1Q15431 976 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 WDR44Q5JSH3 913 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 FUT10Q6P4F1 479 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 TRIM65Q6PJ69 517 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 DSTYKQ6XUX3 929 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 SPATA31D4Q6ZUB0 917 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 OTOP3Q7RTS5 596 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 PPFIBP1Q86W92 1011 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 RNF168Q8IYW5 571 aaPredicted RBP14.58□□□□□ -0.08
CPNE1-209ENST00000415920 NT5C1BQ96P26 610 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 HERC2P3Q9BVR0 1158 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 EMILIN2Q9BXX0 1053 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 TRIM5Q9C035 493 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 NIF3L1Q9GZT8 377 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 RTN4Q9NQC3 1192 aaKnown RBP14.58□□□□□ -0.08
CPNE1-209ENST00000415920 POLIQ9UNA4 740 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 DUSP12Q9UNI6 340 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 COQ4Q9Y3A0 265 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 SNX9Q9Y5X1 595 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 COL4A3Q01955 1670 aa14.58□□□□□ -0.08
CPNE1-209ENST00000415920 VPS13AQ96RL7 3174 aa14.57□□□□□ -0.08
CPNE1-209ENST00000415920 CARNS1A5YM72 827 aa14.57□□□□□ -0.08
CPNE1-209ENST00000415920 KPNA7A9QM74 516 aa14.57□□□□□ -0.08
CPNE1-209ENST00000415920 PMM2O15305 246 aa14.57□□□□□ -0.08
CPNE1-209ENST00000415920 SOD2P04179 222 aa14.57□□□□□ -0.08
CPNE1-209ENST00000415920 ODC1P11926 461 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms