RNA–Protein interactions for RNA: ENST00000415579.2

PTCD2P2-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 2, humanhuman

BASIC

Gene PTCD2P2, Length 1,095 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P2-201ENST00000415579 PCDHB6Q9Y5E3 794 aa6.97□□□□□ -1.29
PTCD2P2-201ENST00000415579 SRPRBQ9Y5M8 271 aaKnown RBP6.97□□□□□ -1.29
PTCD2P2-201ENST00000415579 FRMPD2Q68DX3 1309 aaPredicted RBP6.97□□□□□ -1.29
PTCD2P2-201ENST00000415579 ESYT3A0FGR9 886 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 GOLGA6L3A6NEY3 463 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 SMCO2A6NFE2 343 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 H0Y858 1186 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 OVOL3O00110 214 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 CTAGE5O15320 804 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 KLF4O43474 513 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 EDIL3O43854 480 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 DDNO94850 711 aaPredicted RBP6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 FGFR1P11362 822 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 DEKP35659 375 aaKnown RBP6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 ECE1P42892 770 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 ME1P48163 572 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 MRE11P49959 708 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 NAPAP54920 295 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 RRADP55042 308 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 GPR85P60893 370 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 ATP2C1P98194 919 aaPredicted RBP6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 QRICH1Q2TAL8 776 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 TTC38Q5R3I4 469 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 SYDE2Q5VT97 1194 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 ARL6IP4Q66PJ3 421 aaKnown RBP6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 IGFL4Q6B9Z1 124 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 SHC4Q6S5L8 630 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 HEATR3Q7Z4Q2 680 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 FSIP1Q8NA03 581 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 BICD2Q8TD16 824 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 MRPS27Q92552 414 aaKnown RBP6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 FERMT2Q96AC1 680 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 SGSM3Q96HU1 749 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 ZNF341Q9BYN7 854 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 KATNBL1Q9H079 304 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 KIAA1683Q9H0B3 1180 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 SH2D4AQ9H788 454 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 VAT1LQ9HCJ6 419 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 RNF181Q9P0P0 153 aa6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 SEC63Q9UGP8 760 aaKnown RBP6.96□□□□□ -1.3
PTCD2P2-201ENST00000415579 SYCE3A1L190 88 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 TMEM232C9JQI7 657 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 NPIPB8E9PQR5 432 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 TCF3P15923 654 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 MARCKSP29966 332 aaPredicted RBP6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 SLC16A2P36021 539 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 EPHA5P54756 1037 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 TRAF1Q13077 416 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 CCDC96Q2M329 555 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 SUPT20HL1Q3ZLR7 823 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 L1TD1Q5T7N2 865 aaKnown RBP6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 CCDC73Q6ZRK6 1079 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 PIK3AP1Q6ZUJ8 805 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 FAM160B2Q86V87 743 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 SCYL3Q8IZE3 742 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 CHURC1Q8WUH1 139 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 PIBF1Q8WXW3 757 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 LPAR1Q92633 364 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 COA7Q96BR5 231 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 NEIL1Q96FI4 390 aaPredicted RBP6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 C12orf42Q96LP6 360 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 MENTQ9BUN1 341 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 NUP62CLQ9H1M0 184 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 PCED1AQ9H1Q7 454 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 SEC61A2Q9H9S3 476 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 FEM1BQ9UK73 627 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 TESMINQ9Y4I5 508 aa6.95□□□□□ -1.3
PTCD2P2-201ENST00000415579 CCDC194A0A1B0GVG4 234 aa6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 A0A1B0GVL5 298 aa6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 GLTPD2A6NH11 291 aa6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 FAM90A27PA6NNH2 459 aa6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 FAM47E-STBD1D6RA91 191 aa6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 LAD1O00515 517 aa6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 WDR46O15213 610 aaKnown RBP6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 ZNF202O95125 648 aa6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 XRCC6P12956 609 aaKnown RBP eCLIP6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 PFKFB1P16118 471 aa6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 PRPHP41219 470 aa6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 ADCY7P51828 1080 aa6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 NDUFA8P51970 172 aa6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 MRPL12P52815 198 aaKnown RBP6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 GHRHRQ02643 423 aa6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 IFRD2Q12894 506 aaPredicted RBP6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 USP10Q14694 798 aaKnown RBP6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 NONOQ15233 471 aaKnown RBP eCLIP6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 ZNF174Q15697 407 aa6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 CDC37Q16543 378 aaPredicted RBP6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 RNF151Q2KHN1 245 aa6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 BTBD8Q5XKL5 378 aa6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 USP50Q70EL3 339 aaPredicted RBP6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 HOMER1Q86YM7 354 aa6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 FUKQ8N0W3 1084 aa6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 CRYGNQ8WXF5 182 aa6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 MBOAT7Q96N66 472 aa6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 NUP88Q99567 741 aaPredicted RBP6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 AMNQ9BXJ7 453 aa6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 GLIS2Q9BZE0 524 aaPredicted RBP6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 RANBP17Q9H2T7 1088 aaKnown RBP6.94□□□□□ -1.3
PTCD2P2-201ENST00000415579 GRPEL1Q9HAV7 217 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms