RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 MAFO75444 373 aaPredicted RBP5.41□□□□□ -1.54
VPS41-205ENST00000414632 DNAJC8O75937 253 aaPredicted RBP5.41□□□□□ -1.54
VPS41-205ENST00000414632 BAIAP3O94812 1187 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 SLITRK5O94991 958 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 ALX3O95076 343 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 KCNH1O95259 989 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 CA3P07451 260 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 PFKMP08237 780 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 RAB6AP20340 208 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 YWHABP31946 246 aaKnown RBP5.41□□□□□ -1.54
VPS41-205ENST00000414632 CCT6AP40227 531 aaKnown RBP5.41□□□□□ -1.54
VPS41-205ENST00000414632 PREPP48147 710 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 TRAPPC10P48553 1259 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 GATMP50440 423 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 POLGP54098 1239 aaPredicted RBP5.41□□□□□ -1.54
VPS41-205ENST00000414632 NLRP11P59045 1033 aaKnown RBP5.41□□□□□ -1.54
VPS41-205ENST00000414632 SNRPNP63162 240 aaKnown RBP5.41□□□□□ -1.54
VPS41-205ENST00000414632 SMAD3P84022 425 aaKnown RBP5.41□□□□□ -1.54
VPS41-205ENST00000414632 RESTQ13127 1097 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 MAP7Q14244 749 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 PPP2R5DQ14738 602 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 TARBP2Q15633 366 aaKnown RBP5.41□□□□□ -1.54
VPS41-205ENST00000414632 SF1Q15637 639 aaKnown RBP5.41□□□□□ -1.54
VPS41-205ENST00000414632 TRIM61Q5EBN2 209 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 ODR4Q5SWX8 454 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 TSHZ1Q6ZSZ6 1077 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 FAM228AQ86W67 206 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 RHPN2Q8IUC4 686 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 HERC6Q8IVU3 1022 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 LINC01465Q8N7H1 131 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 LEO1Q8WVC0 666 aaPredicted RBP5.41□□□□□ -1.54
VPS41-205ENST00000414632 LINC01599Q8WXQ3 324 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 MYLIPQ8WY64 445 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 SNX21Q969T3 373 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 TMEM143Q96AN5 459 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 TIFAQ96CG3 184 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 FBXL18Q96ME1 805 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 CCDC140Q96MF4 163 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 NLRP4Q96MN2 994 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 CCDC43Q96MW1 224 aaKnown RBP5.41□□□□□ -1.54
VPS41-205ENST00000414632 MAP7D2Q96T17 732 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 PLIN2Q99541 437 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 TRIM39Q9HCM9 518 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 CYP26B1Q9NR63 512 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 ENAMQ9NRM1 1142 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 SUCLA2Q9P2R7 463 aaPredicted RBP5.41□□□□□ -1.54
VPS41-205ENST00000414632 LRWD1Q9UFC0 647 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 CGGBP1Q9UFW8 167 aaPredicted RBP5.41□□□□□ -1.54
VPS41-205ENST00000414632 NDOR1Q9UHB4 597 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 SFMBT1Q9UHJ3 866 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 PADI3Q9ULW8 664 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 MTMR6Q9Y217 621 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 PCDHB12Q9Y5F1 795 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 CLIC4Q9Y696 253 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 TTC3P53804 2025 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 TDRD15B5MCY1 1934 aaKnown RBP5.4□□□□□ -1.54
VPS41-205ENST00000414632 PRUNE2Q8WUY3 3088 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 A0A087WZ62 844 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 ABHD14A-ACY1A0A1B0GW23 586 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 BLACEA4D250 179 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 ALG1L2C9J202 215 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 E9PMD0 336 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 MAGEB2O15479 319 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 SART1O43290 800 aaKnown RBP5.4□□□□□ -1.54
VPS41-205ENST00000414632 STX6O43752 255 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 MGEA5O60502 916 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 USO1O60763 962 aaKnown RBP5.4□□□□□ -1.54
VPS41-205ENST00000414632 DKC1O60832 514 aaKnown RBP eCLIP5.4□□□□□ -1.54
VPS41-205ENST00000414632 GPR32O75388 356 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 RPS6KA5O75582 802 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 CSPG5O95196 566 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 AMHP03971 560 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 NFICP08651 508 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 SRGAP2CP0DJJ0 459 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 SPATA31C1P0DKV0 1188 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 TMOD1P28289 359 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 ETV3P41162 512 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 GPC3P51654 580 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 GABREP78334 506 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 ATP2C1P98194 919 aaPredicted RBP5.4□□□□□ -1.54
VPS41-205ENST00000414632 GRIN1Q05586 938 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 PKP1Q13835 747 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 EMC2Q15006 297 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 PAN2Q504Q3 1202 aaKnown RBP5.4□□□□□ -1.54
VPS41-205ENST00000414632 RILPL1Q5EBL4 403 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 GTF2IRD2BQ6EKJ0 949 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 CDPF1Q6NVV7 123 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 SHISA2Q6UWI4 295 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 OTUD6AQ7L8S5 288 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 STRA8Q7Z7C7 330 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 RPAINQ86UA6 219 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 RTN4RL1Q86UN2 441 aaPredicted RBP5.4□□□□□ -1.54
VPS41-205ENST00000414632 GTF2IRD2Q86UP8 949 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 CATSPER3Q86XQ3 398 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 C4orf19Q8IY42 314 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 NME8Q8N427 588 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 AFAP1L2Q8N4X5 818 aa5.4□□□□□ -1.54
VPS41-205ENST00000414632 PRPF31Q8WWY3 499 aaKnown RBP5.4□□□□□ -1.54
VPS41-205ENST00000414632 INTS4Q96HW7 963 aaKnown RBP5.4□□□□□ -1.54
VPS41-205ENST00000414632 GUCD1Q96NT3 240 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms