RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 HOOK1Q9UJC3 728 aaKnown RBP20.22■□□□□ 0.83
TRIM56-202ENST00000412507 ANHXE9PGG2 379 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 NRG2O14511 850 aaPredicted RBP20.21■□□□□ 0.83
TRIM56-202ENST00000412507 KINO60870 393 aaKnown RBP20.21■□□□□ 0.83
TRIM56-202ENST00000412507 PHACTR2O75167 634 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 MYL4P12829 197 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 LHX1P48742 406 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 MYL6P60660 151 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 CLDN10P78369 228 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 BIRC3Q13489 604 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 HTR4Q13639 388 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 ZCWPW2Q504Y3 356 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 CYP4A22Q5TCH4 519 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 ZNF658Q5TYW1 1059 aaPredicted RBP20.21■□□□□ 0.83
TRIM56-202ENST00000412507 TDRD10Q5VZ19 366 aaKnown RBP20.21■□□□□ 0.83
TRIM56-202ENST00000412507 POTEHQ6S545 545 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 PARM1Q6UWI2 310 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 LIMS2Q7Z4I7 341 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 SLC44A3Q8N4M1 653 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 SPATA20Q8TB22 786 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 SPATA18Q8TC71 538 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 SPPL2BQ8TCT7 592 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 KBTBD7Q8WVZ9 684 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 FGF14Q92915 247 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 NXPE3Q969Y0 559 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 PBXIP1Q96AQ6 731 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 MMS19Q96T76 1030 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 ASAH2Q9NR71 780 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 ABI2Q9NYB9 513 aaPredicted RBP20.21■□□□□ 0.83
TRIM56-202ENST00000412507 HSFX1Q9UBD0 423 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 NUMBLQ9Y6R0 609 aa20.21■□□□□ 0.83
TRIM56-202ENST00000412507 ZNF197O14709 1029 aa20.2■□□□□ 0.82
TRIM56-202ENST00000412507 GABRDO14764 452 aa20.2■□□□□ 0.82
TRIM56-202ENST00000412507 NARSO43776 548 aaKnown RBP20.2■□□□□ 0.82
TRIM56-202ENST00000412507 C4BPAP04003 597 aaKnown RBP20.2■□□□□ 0.82
TRIM56-202ENST00000412507 RPL13P26373 211 aaKnown RBP20.2■□□□□ 0.82
TRIM56-202ENST00000412507 PRCPP42785 496 aa20.2■□□□□ 0.82
TRIM56-202ENST00000412507 TUFMP49411 452 aaKnown RBP20.2■□□□□ 0.82
TRIM56-202ENST00000412507 AP3M2P53677 418 aa20.2■□□□□ 0.82
TRIM56-202ENST00000412507 SMARCB1Q12824 385 aa20.2■□□□□ 0.82
TRIM56-202ENST00000412507 ADAM9Q13443 819 aa20.2■□□□□ 0.82
TRIM56-202ENST00000412507 WDR72Q3MJ13 1102 aa20.2■□□□□ 0.82
TRIM56-202ENST00000412507 MGAT5BQ3V5L5 792 aa20.2■□□□□ 0.82
TRIM56-202ENST00000412507 INTS6LQ5JSJ4 861 aaKnown RBP20.2■□□□□ 0.82
TRIM56-202ENST00000412507 BMP8AQ7Z5Y6 402 aa20.2■□□□□ 0.82
TRIM56-202ENST00000412507 TMC2Q8TDI7 906 aa20.2■□□□□ 0.82
TRIM56-202ENST00000412507 C2orf15Q8WU43 125 aaKnown RBP20.2■□□□□ 0.82
TRIM56-202ENST00000412507 DUSP12Q9UNI6 340 aa20.2■□□□□ 0.82
TRIM56-202ENST00000412507 PCDHB5Q9Y5E4 795 aa20.2■□□□□ 0.82
TRIM56-202ENST00000412507 MAPK13O15264 365 aa20.19■□□□□ 0.82
TRIM56-202ENST00000412507 AKAP3O75969 853 aa20.19■□□□□ 0.82
TRIM56-202ENST00000412507 HAPLN1P10915 354 aaPredicted RBP20.19■□□□□ 0.82
TRIM56-202ENST00000412507 GJA1P17302 382 aa20.19■□□□□ 0.82
TRIM56-202ENST00000412507 PCSK1P29120 753 aa20.19■□□□□ 0.82
TRIM56-202ENST00000412507 EPHA5P54756 1037 aa20.19■□□□□ 0.82
TRIM56-202ENST00000412507 TNNC1P63316 161 aa20.19■□□□□ 0.82
TRIM56-202ENST00000412507 CCDC142Q17RM4 750 aa20.19■□□□□ 0.82
TRIM56-202ENST00000412507 ISM2Q6H9L7 571 aa20.19■□□□□ 0.82
TRIM56-202ENST00000412507 ELOA2Q8IYF1 753 aaPredicted RBP20.19■□□□□ 0.82
TRIM56-202ENST00000412507 PKMYT1Q99640 499 aa20.19■□□□□ 0.82
TRIM56-202ENST00000412507 LPIN3Q9BQK8 851 aa20.19■□□□□ 0.82
TRIM56-202ENST00000412507 PI4K2AQ9BTU6 479 aa20.19■□□□□ 0.82
TRIM56-202ENST00000412507 RPP25Q9BUL9 199 aaKnown RBP20.19■□□□□ 0.82
TRIM56-202ENST00000412507 LRRC3Q9BY71 257 aa20.19■□□□□ 0.82
TRIM56-202ENST00000412507 GTF3C4Q9UKN8 822 aa20.19■□□□□ 0.82
TRIM56-202ENST00000412507 MOSPD3O75425 235 aa20.18■□□□□ 0.82
TRIM56-202ENST00000412507 VNN1O95497 513 aa20.18■□□□□ 0.82
TRIM56-202ENST00000412507 STAU1O95793 577 aaKnown RBP20.18■□□□□ 0.82
TRIM56-202ENST00000412507 PDGFBP01127 241 aaPredicted RBP20.18■□□□□ 0.82
TRIM56-202ENST00000412507 ATF6P18850 670 aa20.18■□□□□ 0.82
TRIM56-202ENST00000412507 WARSP23381 471 aaKnown RBP20.18■□□□□ 0.82
TRIM56-202ENST00000412507 LMO2P25791 158 aa20.18■□□□□ 0.82
TRIM56-202ENST00000412507 ATICP31939 592 aa20.18■□□□□ 0.82
TRIM56-202ENST00000412507 VAMP7P51809 220 aa20.18■□□□□ 0.82
TRIM56-202ENST00000412507 NFE2Q16621 373 aaPredicted RBP20.18■□□□□ 0.82
TRIM56-202ENST00000412507 EDRF1Q3B7T1 1238 aa20.18■□□□□ 0.82
TRIM56-202ENST00000412507 COBLL1Q53SF7 1204 aa20.18■□□□□ 0.82
TRIM56-202ENST00000412507 C1orf220Q5T0J3 134 aa20.18■□□□□ 0.82
TRIM56-202ENST00000412507 MTSS1LQ765P7 747 aa20.18■□□□□ 0.82
TRIM56-202ENST00000412507 DNAJB7Q7Z6W7 309 aaPredicted RBP20.18■□□□□ 0.82
TRIM56-202ENST00000412507 TMC8Q8IU68 726 aa20.18■□□□□ 0.82
TRIM56-202ENST00000412507 FAM186BQ8IYM0 893 aa20.18■□□□□ 0.82
TRIM56-202ENST00000412507 LEMD2Q8NC56 503 aa20.18■□□□□ 0.82
TRIM56-202ENST00000412507 FAM200AQ8TCP9 573 aa20.18■□□□□ 0.82
TRIM56-202ENST00000412507 PSMG2Q969U7 264 aa20.18■□□□□ 0.82
TRIM56-202ENST00000412507 SYAP1Q96A49 352 aaPredicted RBP20.18■□□□□ 0.82
TRIM56-202ENST00000412507 ELMO3Q96BJ8 720 aa20.18■□□□□ 0.82
TRIM56-202ENST00000412507 MRPL45Q9BRJ2 306 aaKnown RBP20.18■□□□□ 0.82
TRIM56-202ENST00000412507 XYLT2Q9H1B5 865 aa20.18■□□□□ 0.82
TRIM56-202ENST00000412507 GDE1Q9NZC3 331 aa20.18■□□□□ 0.82
TRIM56-202ENST00000412507 NXF1Q9UBU9 619 aaKnown RBP20.18■□□□□ 0.82
TRIM56-202ENST00000412507 ASB3Q9Y575 518 aa20.18■□□□□ 0.82
TRIM56-202ENST00000412507 MIA3Q5JRA6 1907 aa20.17■□□□□ 0.82
TRIM56-202ENST00000412507 TICRRQ7Z2Z1 1910 aa20.17■□□□□ 0.82
TRIM56-202ENST00000412507 MYBPHLA2RUH7 354 aa20.17■□□□□ 0.82
TRIM56-202ENST00000412507 ATP2C2O75185 946 aa20.17■□□□□ 0.82
TRIM56-202ENST00000412507 MICAL2O94851 1124 aa20.17■□□□□ 0.82
TRIM56-202ENST00000412507 CLSTN1O94985 981 aa20.17■□□□□ 0.82
TRIM56-202ENST00000412507 PDGFRBP09619 1106 aa20.17■□□□□ 0.82
TRIM56-202ENST00000412507 PSMC2P35998 433 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms