RNA–Protein interactions for RNA: ENST00000411409.1

RN7SKP3-201, Transcript of RNA, 7SK small nuclear pseudogene 3, humanhuman

BASIC

Gene RN7SKP3, Length 358 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP3-201ENST00000411409 VN1R3Q9BXE9 311 aa10.12□□□□□ -0.79
RN7SKP3-201ENST00000411409 SNX25Q9H3E2 840 aa10.12□□□□□ -0.79
RN7SKP3-201ENST00000411409 ABCB6Q9NP58 842 aa10.12□□□□□ -0.79
RN7SKP3-201ENST00000411409 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.12□□□□□ -0.79
RN7SKP3-201ENST00000411409 GCNT4Q9P109 453 aa10.12□□□□□ -0.79
RN7SKP3-201ENST00000411409 THEGQ9P2T0 379 aa10.12□□□□□ -0.79
RN7SKP3-201ENST00000411409 APEX2Q9UBZ4 518 aa10.12□□□□□ -0.79
RN7SKP3-201ENST00000411409 MTUS1Q9ULD2 1270 aa10.12□□□□□ -0.79
RN7SKP3-201ENST00000411409 BARX2Q9UMQ3 279 aaPredicted RBP10.12□□□□□ -0.79
RN7SKP3-201ENST00000411409 MTCH2Q9Y6C9 303 aa10.12□□□□□ -0.79
RN7SKP3-201ENST00000411409 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 GRXCR2A6NFK2 248 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 PPEF2O14830 753 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 ABLIM3O94929 683 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 HOXB8P17481 243 aaPredicted RBP10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 PON1P27169 355 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 TKTP29401 623 aaKnown RBP10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 HOXA9P31269 272 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 ASPAP45381 313 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 BPIFB4P59827 614 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 ERVFC1P60507 584 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 UBXN1Q04323 297 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 COL19A1Q14993 1142 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 NR1I3Q14994 352 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 STILQ15468 1287 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 CCDC85BQ15834 202 aaPredicted RBP10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 MEA1Q16626 185 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 DUSP6Q16828 381 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 CTXN3Q4LDR2 81 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 C4orf50Q6ZRC1 276 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 CCDC149Q6ZUS6 474 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 APTXQ7Z2E3 356 aaKnown RBP10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 CEP57Q86XR8 500 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 SPPL2BQ8TCT7 592 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 CASP10Q92851 521 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 SEMA4DQ92854 862 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 KLHL5Q96PQ7 755 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 INTS2Q9H0H0 1204 aaKnown RBP10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 TLE6Q9H808 572 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 MMRN2Q9H8L6 949 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 DZANK1Q9NVP4 752 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 DDX43Q9NXZ2 648 aaKnown RBP10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 CHD7Q9P2D1 2997 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 NXF1Q9UBU9 619 aaKnown RBP10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 AFF4Q9UHB7 1163 aaKnown RBP10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 MYO6Q9UM54 1294 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 L1RE1Q9UN81 338 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 CNTN6Q9UQ52 1028 aa10.11□□□□□ -0.79
RN7SKP3-201ENST00000411409 VCANP13611 3396 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 EPOPA6NHQ4 379 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 PES1O00541 588 aaKnown RBP10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 TEX28O15482 410 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 CILPO75339 1184 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 GLUD1P00367 558 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 PAEPP09466 180 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 CNPP09543 421 aaKnown RBP10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 CCDC172P0C7W6 258 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 ATF2P15336 505 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 DNAJB1P25685 340 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 KLRC2P26717 231 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 TUFMP49411 452 aaKnown RBP10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 UBASH3AP57075 661 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 MRPS5P82675 430 aaKnown RBP10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 FANCCQ00597 558 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 PLD1Q13393 1074 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 CFAP221Q4G0U5 840 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 INTS6LQ5JSJ4 861 aaKnown RBP10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 WSCD1Q658N2 575 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 FAM171BQ6P995 826 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 LILRA6Q6PI73 481 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 TAS1R1Q7RTX1 841 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 EFHBQ8N7U6 833 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 CMASQ8NFW8 434 aaPredicted RBP10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 HASPINQ8TF76 798 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 GDPD5Q8WTR4 605 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 KBTBD7Q8WVZ9 684 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 CLSTN3Q9BQT9 956 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 NT5C1AQ9BXI3 368 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 ZCWPW1Q9H0M4 648 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 NUCKS1Q9H1E3 243 aaKnown RBP10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 VPS16Q9H269 839 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 CERS4Q9HA82 394 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 APOBEC3GQ9HC16 384 aaKnown RBP10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 TAB2Q9NYJ8 693 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 EHD2Q9NZN4 543 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 CEP72Q9P209 647 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 SCN1AP35498 2009 aa10.1□□□□□ -0.79
RN7SKP3-201ENST00000411409 ATP8B3O60423 1300 aa10.09□□□□□ -0.79
RN7SKP3-201ENST00000411409 ITIH6Q6UXX5 1313 aa10.09□□□□□ -0.79
RN7SKP3-201ENST00000411409 CDH23Q9H251 3354 aa10.09□□□□□ -0.79
RN7SKP3-201ENST00000411409 A8MXQ7 604 aa10.09□□□□□ -0.79
RN7SKP3-201ENST00000411409 F8W810 466 aa10.09□□□□□ -0.79
RN7SKP3-201ENST00000411409 CLASP2O75122 1294 aaKnown RBP10.09□□□□□ -0.79
RN7SKP3-201ENST00000411409 HNRNPA1P09651 372 aaKnown RBP eCLIP10.09□□□□□ -0.79
RN7SKP3-201ENST00000411409 ATP1A3P13637 1013 aa10.09□□□□□ -0.79
RN7SKP3-201ENST00000411409 MAGEA11P43364 429 aa10.09□□□□□ -0.79
RN7SKP3-201ENST00000411409 CLCN4P51793 760 aa10.09□□□□□ -0.79
RN7SKP3-201ENST00000411409 KCNC3Q14003 757 aa10.09□□□□□ -0.79
RN7SKP3-201ENST00000411409 TRIM14Q14142 442 aa10.09□□□□□ -0.79
RN7SKP3-201ENST00000411409 KLHDC7AQ5VTJ3 777 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms