RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 ZBTB1Q9Y2K1 713 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 MAFBQ9Y5Q3 323 aaPredicted RBP-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 NLRC5Q86WI3 1866 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 DCHS2Q6V1P9 2916 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 PTPRQQ9UMZ3 2332 aa-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 TDRD6O60522 2096 aaKnown RBP-1.04□□□□□ -2.58
RNU4-88P-201ENST00000411220 MGAM2Q2M2H8 2515 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 NCOR1O75376 2440 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 FNDC1Q4ZHG4 1894 aaPredicted RBP-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 A0A0J9YWU9 116 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 CCDC188H7C350 402 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 EIF1AYO14602 144 aaKnown RBP-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 ZNF213O14771 459 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 AIREO43918 545 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 PRKNO60260 465 aaPredicted RBP-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 SNRNP70P08621 437 aaKnown RBP-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 THRBP10828 461 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 GUCY2CP25092 1073 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 ERVK-21P61565 698 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 ENPP2Q13822 863 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 PPP2R5DQ14738 602 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 KRT31Q15323 416 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 COL28A1Q2UY09 1125 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 ZCCHC12Q6PEW1 402 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 SMIM29Q86T20 159 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 CROCCP3Q8IVE0 287 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 ZNF440Q8IYI8 595 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 ZCCHC24Q8N2G6 241 aaKnown RBP-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 ZNF561Q8N587 486 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 FGFBP3Q8TAT2 258 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 DMRTB1Q96MA1 342 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 PKP4Q99569 1192 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 IL21RQ9HBE5 538 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 SLC6A20Q9NP91 592 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 SEMA4BQ9NPR2 832 aaPredicted RBP-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 TMEM184CQ9NVA4 438 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 USP36Q9P275 1121 aaKnown RBP-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 ADAM18Q9Y3Q7 739 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 PIEZO2Q9H5I5 2752 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 CACNA1HO95180 2353 aa-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 ANKRD11Q6UB99 2663 aaPredicted RBP-1.05□□□□□ -2.58
RNU4-88P-201ENST00000411220 CCDC168Q8NDH2 2452 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 ACIN1Q9UKV3 1341 aaKnown RBP-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 A0A1W2PQ67 120 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 ACOT7O00154 380 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 PROM1O43490 865 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 BPNT1O95861 308 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 IGKV4-1P06312 121 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 ITGA4P13612 1032 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 HSP90B1P14625 803 aaKnown RBP-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 GSPT1P15170 499 aaKnown RBP-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 PTGS1P23219 599 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 ECHS1P30084 290 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 CDKN1AP38936 164 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 ZFP36L2P47974 494 aaKnown RBP-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 IL9RQ01113 521 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 TNFRSF9Q07011 255 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 ANKRD39Q53RE8 183 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 MANEAQ5SRI9 462 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 AGAP9Q5VTM2 703 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 NSUN5P2Q63ZY6 315 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 LINC00336Q6ZUF6 198 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 TRILQ7L0X0 811 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 SLC29A4Q7RTT9 530 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 LIX1LQ8IVB5 337 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 HACE1Q8IYU2 909 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 UNC5BQ8IZJ1 945 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 ZNF441Q8N8Z8 693 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 IL17RCQ8NAC3 791 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 ADAMTS16Q8TE57 1224 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 SSH1Q8WYL5 1049 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 RPGRQ92834 1020 aaKnown RBP-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 SLCO2A1Q92959 643 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 DUX5Q96PT3 197 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 ZNF670Q9BS34 389 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 RBM38Q9H0Z9 239 aaKnown RBP-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 OR10A5Q9H207 317 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 CCDC87Q9NVE4 849 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 POGKQ9P215 609 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 EPS15L1Q9UBC2 864 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 TCF19Q9Y242 345 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 NUB1Q9Y5A7 615 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 CSAG2Q9Y5P2 127 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 CELSR2Q9HCU4 2923 aa-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 COL5A3P25940 1745 aaPredicted RBP-1.06□□□□□ -2.58
RNU4-88P-201ENST00000411220 ZNFX1Q9P2E3 1918 aaKnown RBP-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 IGKV1D-17A0A075B6S4 117 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 A0A087WZG4 1122 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 LRCOL1A6NCL2 159 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 GLTPD2A6NH11 291 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 FAM189A1O60320 539 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 VAMP4O75379 141 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 ERN1O75460 977 aaKnown RBP-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 AGFG2O95081 481 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 CFBP00751 764 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 HOXB2P14652 356 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 MMP9P14780 707 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 TLX1P31314 330 aaPredicted RBP-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 ID4P47928 161 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 PSMD8P48556 350 aa-1.07□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms