RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 O00370 1275 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 ZNF185O15231 689 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 DDX3YO15523 660 aaKnown RBP5.86□□□□□ -1.47
EPHA4-202ENST00000409854 CAPN15O75808 1086 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 THP07101 528 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 AARSP49588 968 aaKnown RBP eCLIP5.86□□□□□ -1.47
EPHA4-202ENST00000409854 LILRA4P59901 499 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 TUBB4BP68371 445 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 GPNMBQ14956 572 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 STILQ15468 1287 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 CNGA2Q16280 664 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 ANKRD33Q7Z3H0 272 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 DAAM2Q86T65 1068 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 RTN4RL1Q86UN2 441 aaPredicted RBP5.86□□□□□ -1.47
EPHA4-202ENST00000409854 PASD1Q8IV76 773 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 ANKRD7Q92527 254 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 CD101Q93033 1021 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 LPPQ93052 612 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 GAD1Q99259 594 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 NT5C1AQ9BXI3 368 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 RSAD1Q9HA92 442 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 SNX9Q9Y5X1 595 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 TTC3P53804 2025 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 PTPRSQ13332 1948 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 COL4A6Q14031 1691 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 PDE2AO00408 941 aaPredicted RBP5.86□□□□□ -1.47
EPHA4-202ENST00000409854 EOMESO95936 686 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 CALB1P05937 261 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 WARSP23381 471 aaKnown RBP5.86□□□□□ -1.47
EPHA4-202ENST00000409854 RRM1P23921 792 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 RPL9P32969 192 aaKnown RBP5.86□□□□□ -1.47
EPHA4-202ENST00000409854 GABRB2P47870 512 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 AFF1P51825 1210 aaKnown RBP5.86□□□□□ -1.47
EPHA4-202ENST00000409854 GRIK3Q13003 919 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 BFSP2Q13515 415 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 RPS6KA1Q15418 735 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 PKDCCQ504Y2 493 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 PPP1R15BQ5SWA1 713 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 ARHGAP17Q68EM7 881 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 DENND1BQ6P3S1 775 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 LCLAT1Q6UWP7 414 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 PEX26Q7Z412 305 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 CRYBG2Q8N1P7 616 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 C1orf131Q8NDD1 294 aaKnown RBP5.86□□□□□ -1.47
EPHA4-202ENST00000409854 TET1Q8NFU7 2136 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 ZNF333Q96JL9 665 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 PBKQ96KB5 322 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 MMS19Q96T76 1030 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 FTHL17Q9BXU8 183 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 RNF208Q9H0X6 261 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 TSPYL2Q9H2G4 693 aaPredicted RBP5.86□□□□□ -1.47
EPHA4-202ENST00000409854 GOLPH3Q9H4A6 298 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 RNF19AQ9NV58 838 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 ADAM22Q9P0K1 906 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 CYTH4Q9UIA0 394 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 AMFRQ9UKV5 643 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 PACSIN2Q9UNF0 486 aaPredicted RBP5.86□□□□□ -1.47
EPHA4-202ENST00000409854 SCINQ9Y6U3 715 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 ALPK3Q96L96 1907 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 CTAGE15A4D2H0 777 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 MIF4GDA9UHW6 222 aaKnown RBP5.85□□□□□ -1.47
EPHA4-202ENST00000409854 NBNO60934 754 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 MICAL2O94851 1124 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 CTAGE8P0CG41 777 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 FGFR1P11362 822 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 COL6A1P12109 1028 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 PAX3P23760 479 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 CTNNA2P26232 953 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 SCNN1GP51170 649 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 MAMLD1Q13495 774 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 SGO2Q562F6 1265 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 PLEKHG4Q58EX7 1191 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 LIN9Q5TKA1 542 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 MMS22LQ6ZRQ5 1243 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 CTAGE6Q86UF2 777 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 CTAGE4Q8IX94 777 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 RASGEF1CQ8N431 466 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 GOLGA1Q92805 767 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 ARMC5Q96C12 935 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 C11orf70Q9BRQ4 267 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 MRPL47Q9HD33 250 aaKnown RBP5.85□□□□□ -1.47
EPHA4-202ENST00000409854 PUF60Q9UHX1 559 aaKnown RBP5.85□□□□□ -1.47
EPHA4-202ENST00000409854 TTC7AQ9ULT0 858 aaPredicted RBP5.85□□□□□ -1.47
EPHA4-202ENST00000409854 L1RE1Q9UN81 338 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 CEP83Q9Y592 693 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 ALG6Q9Y672 507 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 KIAA1671Q9BY89 1806 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 GABRDO14764 452 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 PFKMP08237 780 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 CD19P15391 556 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 SSTR3P32745 418 aaPredicted RBP5.85□□□□□ -1.47
EPHA4-202ENST00000409854 MAN1A1P33908 653 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 GPD2P43304 727 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 ORC1Q13415 861 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 NAA30Q147X3 362 aaPredicted RBP5.85□□□□□ -1.47
EPHA4-202ENST00000409854 UPP1Q16831 310 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 PTPN20Q4JDL3 420 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 FBXO46Q6PJ61 603 aaPredicted RBP5.85□□□□□ -1.47
EPHA4-202ENST00000409854 SLC39A5Q6ZMH5 540 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 SLC24A5Q71RS6 500 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms