RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 ZNF558Q96NG5 402 aa13.41□□□□□ -0.26
PMS1-204ENST00000409823 GDF15Q99988 308 aa13.41□□□□□ -0.26
PMS1-204ENST00000409823 TMEM175Q9BSA9 504 aa13.41□□□□□ -0.26
PMS1-204ENST00000409823 VN1R3Q9BXE9 311 aa13.41□□□□□ -0.26
PMS1-204ENST00000409823 NOCTQ9UK39 431 aaKnown RBP13.41□□□□□ -0.26
PMS1-204ENST00000409823 CNTN6Q9UQ52 1028 aa13.41□□□□□ -0.26
PMS1-204ENST00000409823 A0A087X0T9 212 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 TACC1O75410 805 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 OR4Q2P0C623 313 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 FAM228BP0C875 321 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 YWHAEP62258 255 aaKnown RBP13.4□□□□□ -0.26
PMS1-204ENST00000409823 YWHAHQ04917 246 aaPredicted RBP13.4□□□□□ -0.26
PMS1-204ENST00000409823 RTP2Q5QGT7 225 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 OVOS1Q6IE37 1185 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 COLGALT1Q8NBJ5 622 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 ACRBPQ8NEB7 543 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 ZNF606Q8WXB4 792 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 RTP3Q9BQQ7 232 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 PDCL3Q9H2J4 239 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 SF3B1O75533 1304 aaKnown RBP eCLIP13.4□□□□□ -0.265e-8■■■■■ 189.5
PMS1-204ENST00000409823 A0A0U1RQJ8 604 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 TRAPPC3O43617 180 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 CA3P07451 260 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 LINC00271P0C7V0 271 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 CCDC130P13994 396 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 CHRNB2P17787 502 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 DNAJB2P25686 324 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 KIF11P52732 1056 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 LIMS2Q7Z4I7 341 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 PHOSPHO2Q8TCD6 241 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 ATRIPQ8WXE1 791 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 DDX1Q92499 740 aaKnown RBP13.4□□□□□ -0.26
PMS1-204ENST00000409823 TMEM169Q96HH4 297 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 AGPAT1Q99943 283 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 CERS4Q9HA82 394 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 DAAM1Q9Y4D1 1078 aa13.4□□□□□ -0.26
PMS1-204ENST00000409823 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.4□□□□□ -0.26
PMS1-204ENST00000409823 TMEM189-UBE2V1I3L0A0 370 aa13.39□□□□□ -0.27
PMS1-204ENST00000409823 CCDC172P0C7W6 258 aa13.39□□□□□ -0.27
PMS1-204ENST00000409823 PRKCIP41743 596 aa13.39□□□□□ -0.27
PMS1-204ENST00000409823 C2CD6Q53TS8 623 aa13.39□□□□□ -0.27
PMS1-204ENST00000409823 PRSS55Q6UWB4 352 aaPredicted RBP13.39□□□□□ -0.27
PMS1-204ENST00000409823 CCDC112Q8NEF3 446 aa13.39□□□□□ -0.27
PMS1-204ENST00000409823 OR10T2Q8NGX3 314 aa13.39□□□□□ -0.27
PMS1-204ENST00000409823 LNX1Q8TBB1 728 aaPredicted RBP13.39□□□□□ -0.27
PMS1-204ENST00000409823 AUTS2Q8WXX7 1259 aa13.39□□□□□ -0.27
PMS1-204ENST00000409823 PCDHB18PQ96TA0 734 aa13.39□□□□□ -0.27
PMS1-204ENST00000409823 C17orf80Q9BSJ5 609 aa13.39□□□□□ -0.27
PMS1-204ENST00000409823 TAS2R14Q9NYV8 317 aa13.39□□□□□ -0.27
PMS1-204ENST00000409823 GTF3C4Q9UKN8 822 aa13.39□□□□□ -0.27
PMS1-204ENST00000409823 MYBPHLA2RUH7 354 aa13.39□□□□□ -0.27
PMS1-204ENST00000409823 DDX3XO00571 662 aaKnown RBP eCLIP13.39□□□□□ -0.277e-11■■■□□ 18.9
PMS1-204ENST00000409823 GABRDO14764 452 aa13.39□□□□□ -0.27
PMS1-204ENST00000409823 ZNF263O14978 683 aa13.39□□□□□ -0.27
PMS1-204ENST00000409823 RPL17P18621 184 aaKnown RBP13.39□□□□□ -0.27
PMS1-204ENST00000409823 WARSP23381 471 aaKnown RBP13.39□□□□□ -0.27
PMS1-204ENST00000409823 ARPP19P56211 112 aa13.39□□□□□ -0.27
PMS1-204ENST00000409823 FMO1Q01740 532 aa13.39□□□□□ -0.27
PMS1-204ENST00000409823 VARS2Q5ST30 1063 aaKnown RBP13.39□□□□□ -0.27
PMS1-204ENST00000409823 PPP1R26Q5T8A7 1209 aaPredicted RBP13.39□□□□□ -0.27
PMS1-204ENST00000409823 METTL23Q86XA0 190 aa13.39□□□□□ -0.27
PMS1-204ENST00000409823 SLC30A5Q8TAD4 765 aa13.39□□□□□ -0.27
PMS1-204ENST00000409823 OLIG1Q8TAK6 271 aa13.39□□□□□ -0.27
PMS1-204ENST00000409823 ALG13Q9NP73 1137 aaKnown RBP13.39□□□□□ -0.27
PMS1-204ENST00000409823 EPN1Q9Y6I3 576 aaPredicted RBP13.39□□□□□ -0.27
PMS1-204ENST00000409823 CLDN5O00501 218 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 ARHGAP6O43182 974 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 NRDCO43847 1150 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 NDUFA10O95299 355 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 LAG3P18627 525 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 TNFAIP3P21580 790 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 FECHP22830 423 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 ADORA2BP29275 332 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 CA8P35219 290 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 MDH1BQ5I0G3 518 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 SLC39A11Q8N1S5 342 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 KLHL23Q8NBE8 558 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 B3GALNT2Q8NCR0 500 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 UBA3Q8TBC4 463 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 CPA5Q8WXQ8 436 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 CYFIP2Q96F07 1278 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 FAXDC2Q96IV6 333 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 RHOBTB2Q9BYZ6 727 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 TRMT1Q9NXH9 659 aaKnown RBP13.38□□□□□ -0.27
PMS1-204ENST00000409823 SPG21Q9NZD8 308 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 PCDHB8Q9UN66 801 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 PCDHB12Q9Y5F1 795 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 BZW2Q9Y6E2 419 aaKnown RBP13.38□□□□□ -0.27
PMS1-204ENST00000409823 MYO7AQ13402 2215 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 LINC01553A4QN01 128 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 FGF18O76093 207 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 LHX1P48742 406 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 CDR2Q01850 454 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 ASTE1Q2TB18 679 aaPredicted RBP13.38□□□□□ -0.27
PMS1-204ENST00000409823 KIAA1841Q6NSI8 718 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 TMEM86AQ8N2M4 240 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 SYT11Q9BT88 431 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 CRTAC1Q9NQ79 661 aa13.38□□□□□ -0.27
PMS1-204ENST00000409823 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.38□□□□□ -0.27
PMS1-204ENST00000409823 PTPN1P18031 435 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms