RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 ACAT1P24752 427 aaKnown RBP23.95■■□□□ 1.42
PTCD3-203ENST00000409783 CBX2Q14781 532 aaPredicted RBP23.95■■□□□ 1.42
PTCD3-203ENST00000409783 PPM1LQ5SGD2 360 aa23.95■■□□□ 1.42
PTCD3-203ENST00000409783 CES5AQ6NT32 575 aa23.95■■□□□ 1.42
PTCD3-203ENST00000409783 SASS6Q6UVJ0 657 aa23.95■■□□□ 1.42
PTCD3-203ENST00000409783 CYP26C1Q6V0L0 522 aa23.95■■□□□ 1.42
PTCD3-203ENST00000409783 CCDC149Q6ZUS6 474 aa23.95■■□□□ 1.42
PTCD3-203ENST00000409783 C11orf57Q6ZUT1 292 aaPredicted RBP23.95■■□□□ 1.42
PTCD3-203ENST00000409783 FBXL13Q8NEE6 735 aa23.95■■□□□ 1.42
PTCD3-203ENST00000409783 PGLYRP2Q96PD5 576 aa23.95■■□□□ 1.42
PTCD3-203ENST00000409783 FAM50BQ9Y247 325 aa23.95■■□□□ 1.42
PTCD3-203ENST00000409783 SPDYE4A6NLX3 237 aa23.94■■□□□ 1.42
PTCD3-203ENST00000409783 POU2F2P09086 479 aa23.94■■□□□ 1.42
PTCD3-203ENST00000409783 ASPAP45381 313 aa23.94■■□□□ 1.42
PTCD3-203ENST00000409783 FMO5P49326 533 aa23.94■■□□□ 1.42
PTCD3-203ENST00000409783 CDH8P55286 799 aa23.94■■□□□ 1.42
PTCD3-203ENST00000409783 NOP14P78316 857 aaKnown RBP23.94■■□□□ 1.42
PTCD3-203ENST00000409783 MYL7Q01449 175 aa23.94■■□□□ 1.42
PTCD3-203ENST00000409783 CCDC142Q17RM4 750 aa23.94■■□□□ 1.42
PTCD3-203ENST00000409783 SLC39A12Q504Y0 691 aa23.94■■□□□ 1.42
PTCD3-203ENST00000409783 INTS6LQ5JSJ4 861 aaKnown RBP23.94■■□□□ 1.42
PTCD3-203ENST00000409783 ATAD1Q8NBU5 361 aa23.94■■□□□ 1.42
PTCD3-203ENST00000409783 CNOT6LQ96LI5 555 aaKnown RBP23.94■■□□□ 1.42
PTCD3-203ENST00000409783 POMKQ9H5K3 350 aa23.94■■□□□ 1.42
PTCD3-203ENST00000409783 CYP4F11Q9HBI6 524 aa23.94■■□□□ 1.42
PTCD3-203ENST00000409783 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.94■■□□□ 1.42
PTCD3-203ENST00000409783 RAB20Q9NX57 234 aa23.94■■□□□ 1.42
PTCD3-203ENST00000409783 INSL5Q9Y5Q6 135 aa23.94■■□□□ 1.42
PTCD3-203ENST00000409783 CCDC192P0DO97 292 aa23.93■■□□□ 1.42
PTCD3-203ENST00000409783 PTMSP20962 102 aa23.93■■□□□ 1.42
PTCD3-203ENST00000409783 ELF1P32519 619 aa23.93■■□□□ 1.42
PTCD3-203ENST00000409783 MTHFRP42898 656 aa23.93■■□□□ 1.42
PTCD3-203ENST00000409783 RAP1GAPP47736 663 aa23.93■■□□□ 1.42
PTCD3-203ENST00000409783 STX1AQ16623 288 aa23.93■■□□□ 1.42
PTCD3-203ENST00000409783 ATAT1Q5SQI0 421 aa23.93■■□□□ 1.42
PTCD3-203ENST00000409783 TTC9BQ8N6N2 239 aa23.93■■□□□ 1.42
PTCD3-203ENST00000409783 SMG7Q92540 1137 aaKnown RBP23.93■■□□□ 1.42
PTCD3-203ENST00000409783 RIPOR3Q96MK2 946 aa23.93■■□□□ 1.42
PTCD3-203ENST00000409783 BCO2Q9BYV7 579 aa23.93■■□□□ 1.42
PTCD3-203ENST00000409783 THAP9Q9H5L6 903 aa23.93■■□□□ 1.42
PTCD3-203ENST00000409783 ANO10Q9NW15 660 aa23.93■■□□□ 1.42
PTCD3-203ENST00000409783 PTPRDP23468 1912 aa23.92■■□□□ 1.42
PTCD3-203ENST00000409783 A0A0C4DFX4 3053 aa23.92■■□□□ 1.42
PTCD3-203ENST00000409783 PRRG1O14668 218 aa23.92■■□□□ 1.42
PTCD3-203ENST00000409783 CCL16O15467 120 aa23.92■■□□□ 1.42
PTCD3-203ENST00000409783 ATP2C2O75185 946 aa23.92■■□□□ 1.42
PTCD3-203ENST00000409783 PCSK1P29120 753 aa23.92■■□□□ 1.42
PTCD3-203ENST00000409783 GNL1P36915 607 aaPredicted RBP23.92■■□□□ 1.42
PTCD3-203ENST00000409783 CDR1P51861 262 aa23.92■■□□□ 1.42
PTCD3-203ENST00000409783 TSPY1Q01534 308 aa23.92■■□□□ 1.42
PTCD3-203ENST00000409783 KCNH2Q12809 1159 aa23.92■■□□□ 1.42
PTCD3-203ENST00000409783 SMARCB1Q12824 385 aa23.92■■□□□ 1.42
PTCD3-203ENST00000409783 DUSP4Q13115 394 aa23.92■■□□□ 1.42
PTCD3-203ENST00000409783 FAM171BQ6P995 826 aa23.92■■□□□ 1.42
PTCD3-203ENST00000409783 SCARA5Q6ZMJ2 495 aa23.92■■□□□ 1.42
PTCD3-203ENST00000409783 DCP1BQ8IZD4 617 aaKnown RBP23.92■■□□□ 1.42
PTCD3-203ENST00000409783 NECTIN4Q96NY8 510 aa23.92■■□□□ 1.42
PTCD3-203ENST00000409783 SYT15Q9BQS2 421 aa23.92■■□□□ 1.42
PTCD3-203ENST00000409783 IMPG2Q9BZV3 1241 aa23.92■■□□□ 1.42
PTCD3-203ENST00000409783 CRTAC1Q9NQ79 661 aa23.92■■□□□ 1.42
PTCD3-203ENST00000409783 HSFX1Q9UBD0 423 aa23.92■■□□□ 1.42
PTCD3-203ENST00000409783 CDH9Q9ULB4 789 aa23.92■■□□□ 1.42
PTCD3-203ENST00000409783 VCANP13611 3396 aa23.92■■□□□ 1.42
PTCD3-203ENST00000409783 MYBPHLA2RUH7 354 aa23.91■■□□□ 1.42
PTCD3-203ENST00000409783 PDGFRBP09619 1106 aa23.91■■□□□ 1.42
PTCD3-203ENST00000409783 TYRO3Q06418 890 aa23.91■■□□□ 1.42
PTCD3-203ENST00000409783 OR6B3Q8NGW1 331 aa23.91■■□□□ 1.42
PTCD3-203ENST00000409783 LMO3Q8TAP4 145 aa23.91■■□□□ 1.42
PTCD3-203ENST00000409783 ENOX1Q8TC92 643 aaKnown RBP23.91■■□□□ 1.42
PTCD3-203ENST00000409783 ADAMTS19Q8TE59 1207 aa23.91■■□□□ 1.42
PTCD3-203ENST00000409783 C2orf15Q8WU43 125 aaKnown RBP23.91■■□□□ 1.42
PTCD3-203ENST00000409783 NECAB3Q96P71 396 aaPredicted RBP23.91■■□□□ 1.42
PTCD3-203ENST00000409783 PHF7Q9BWX1 381 aaPredicted RBP23.91■■□□□ 1.42
PTCD3-203ENST00000409783 NIF3L1Q9GZT8 377 aa23.91■■□□□ 1.42
PTCD3-203ENST00000409783 SNX25Q9H3E2 840 aa23.91■■□□□ 1.42
PTCD3-203ENST00000409783 PRKAG3Q9UGI9 489 aa23.91■■□□□ 1.42
PTCD3-203ENST00000409783 GTF3C4Q9UKN8 822 aa23.91■■□□□ 1.42
PTCD3-203ENST00000409783 SLC27A5Q9Y2P5 690 aa23.91■■□□□ 1.42
PTCD3-203ENST00000409783 YIPF1Q9Y548 306 aa23.91■■□□□ 1.42
PTCD3-203ENST00000409783 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.91■■□□□ 1.42
PTCD3-203ENST00000409783 P4HA2O15460 535 aa23.9■■□□□ 1.42
PTCD3-203ENST00000409783 P4HA1P13674 534 aa23.9■■□□□ 1.42
PTCD3-203ENST00000409783 PSMC1P62191 440 aaKnown RBP23.9■■□□□ 1.42
PTCD3-203ENST00000409783 ZP2Q05996 745 aa23.9■■□□□ 1.42
PTCD3-203ENST00000409783 TPD52L1Q16890 204 aaPredicted RBP23.9■■□□□ 1.42
PTCD3-203ENST00000409783 ADHFE1Q8IWW8 467 aa23.9■■□□□ 1.42
PTCD3-203ENST00000409783 SPPL2BQ8TCT7 592 aa23.9■■□□□ 1.42
PTCD3-203ENST00000409783 TATDN2Q93075 761 aa23.9■■□□□ 1.42
PTCD3-203ENST00000409783 FAXDC2Q96IV6 333 aa23.9■■□□□ 1.42
PTCD3-203ENST00000409783 DPEP3Q9H4B8 488 aa23.9■■□□□ 1.42
PTCD3-203ENST00000409783 WDR6Q9NNW5 1121 aaKnown RBP23.9■■□□□ 1.42
PTCD3-203ENST00000409783 SAMSN1Q9NSI8 373 aaKnown RBP23.9■■□□□ 1.42
PTCD3-203ENST00000409783 DOCK8Q8NF50 2099 aa23.89■■□□□ 1.41
PTCD3-203ENST00000409783 C19orf67A6NJJ6 358 aa23.89■■□□□ 1.41
PTCD3-203ENST00000409783 N4BP1O75113 896 aaKnown RBP23.89■■□□□ 1.41
PTCD3-203ENST00000409783 AFPP02771 609 aaKnown RBP23.89■■□□□ 1.41
PTCD3-203ENST00000409783 NFE2Q16621 373 aaPredicted RBP23.89■■□□□ 1.41
PTCD3-203ENST00000409783 LPIN3Q9BQK8 851 aa23.89■■□□□ 1.41
PTCD3-203ENST00000409783 FUCA2Q9BTY2 467 aa23.89■■□□□ 1.41
PTCD3-203ENST00000409783 DNAJC25Q9H1X3 360 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms