RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 FAXCQ5TGI0 409 aa12.02□□□□□ -0.48
SNX13-202ENST00000409604 NOP9Q86U38 636 aaKnown RBP12.02□□□□□ -0.48
SNX13-202ENST00000409604 RNPC3Q96LT9 517 aaKnown RBP12.02□□□□□ -0.48
SNX13-202ENST00000409604 SYT15Q9BQS2 421 aa12.02□□□□□ -0.48
SNX13-202ENST00000409604 COLEC11Q9BWP8 271 aa12.02□□□□□ -0.48
SNX13-202ENST00000409604 FAM237AA0A1B0GTK4 181 aa12.02□□□□□ -0.49
SNX13-202ENST00000409604 CCL5P13501 91 aa12.02□□□□□ -0.49
SNX13-202ENST00000409604 ATP2A2P16615 1042 aaKnown RBP12.02□□□□□ -0.49
SNX13-202ENST00000409604 ATP4AP20648 1035 aa12.02□□□□□ -0.49
SNX13-202ENST00000409604 DEUP1Q05D60 604 aa12.02□□□□□ -0.49
SNX13-202ENST00000409604 EFEMP1Q12805 493 aa12.02□□□□□ -0.49
SNX13-202ENST00000409604 ARHGEF18Q6ZSZ5 1173 aa12.02□□□□□ -0.49
SNX13-202ENST00000409604 TMEM176AQ96HP8 235 aa12.02□□□□□ -0.49
SNX13-202ENST00000409604 SSX2IPQ9Y2D8 614 aa12.02□□□□□ -0.49
SNX13-202ENST00000409604 CASZ1Q86V15 1759 aa12.02□□□□□ -0.49
SNX13-202ENST00000409604 CNTRLQ7Z7A1 2325 aa12.02□□□□□ -0.49
SNX13-202ENST00000409604 ECEL1O95672 775 aa12.02□□□□□ -0.49
SNX13-202ENST00000409604 ODC1P11926 461 aa12.02□□□□□ -0.49
SNX13-202ENST00000409604 ALDH1A3P47895 512 aa12.02□□□□□ -0.49
SNX13-202ENST00000409604 NAB2Q15742 525 aa12.02□□□□□ -0.49
SNX13-202ENST00000409604 GEN1Q17RS7 908 aa12.02□□□□□ -0.49
SNX13-202ENST00000409604 ZNF410Q86VK4 478 aa12.02□□□□□ -0.49
SNX13-202ENST00000409604 DDX42Q86XP3 938 aaKnown RBP eCLIP12.02□□□□□ -0.49
SNX13-202ENST00000409604 ELMOD1Q8N336 334 aa12.02□□□□□ -0.49
SNX13-202ENST00000409604 PARD6BQ9BYG5 372 aa12.02□□□□□ -0.49
SNX13-202ENST00000409604 CEP41Q9BYV8 373 aa12.02□□□□□ -0.49
SNX13-202ENST00000409604 STRIP2Q9ULQ0 834 aa12.02□□□□□ -0.49
SNX13-202ENST00000409604 CNMDO75829 334 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 ADSSP30520 456 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 ETFBP38117 255 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 EPHB1P54762 984 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 IRX4P78413 519 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 CDK17Q00537 523 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 NECAB2Q7Z6G3 386 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 P3H4Q92791 437 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 PCYT2Q99447 389 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 TNFSF13BQ9Y275 285 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 RP1L1Q8IWN7 2480 aaPredicted RBP12.01□□□□□ -0.49
SNX13-202ENST00000409604 PABPN1LA6NDY0 278 aaKnown RBP12.01□□□□□ -0.49
SNX13-202ENST00000409604 C22orf31O95567 290 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 MYL4P12829 197 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 XPAP23025 273 aaPredicted RBP12.01□□□□□ -0.49
SNX13-202ENST00000409604 ICAM3P32942 547 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 DR1Q01658 176 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 DHX9Q08211 1270 aaKnown RBP12.01□□□□□ -0.49
SNX13-202ENST00000409604 ADIGQ0VDE8 80 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 PSMD6Q15008 389 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 SLAIN1Q8ND83 568 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 TMC2Q8TDI7 906 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 RAB17Q9H0T7 212 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 URODP06132 367 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 CRYBB1P53674 252 aaPredicted RBP12.01□□□□□ -0.49
SNX13-202ENST00000409604 CDR2Q01850 454 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 MAPK7Q13164 816 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 KYAT1Q16773 422 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 TAPT1Q6NXT6 567 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 TTC30BQ8N4P2 665 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 C10orf88Q9H8K7 445 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 FEZ2Q9UHY8 353 aaPredicted RBP12.01□□□□□ -0.49
SNX13-202ENST00000409604 RPTORQ8N122 1335 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 TKTL1P51854 596 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 EFHC2Q5JST6 749 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 ELOA2Q8IYF1 753 aaPredicted RBP12.01□□□□□ -0.49
SNX13-202ENST00000409604 TRIM51Q9BSJ1 452 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 TJP2Q9UDY2 1190 aa12.01□□□□□ -0.49
SNX13-202ENST00000409604 AKAP11Q9UKA4 1901 aa12□□□□□ -0.49
SNX13-202ENST00000409604 A0A0B4J269 797 aa12□□□□□ -0.49
SNX13-202ENST00000409604 SMIM28A0A1B0GU29 152 aa12□□□□□ -0.49
SNX13-202ENST00000409604 DDX3XO00571 662 aaKnown RBP eCLIP12□□□□□ -0.493e-18■■■□□ 15.2
SNX13-202ENST00000409604 KLRC2P26717 231 aa12□□□□□ -0.49
SNX13-202ENST00000409604 LRRC31Q6UY01 552 aa12□□□□□ -0.49
SNX13-202ENST00000409604 PDZD4Q76G19 769 aaPredicted RBP12□□□□□ -0.49
SNX13-202ENST00000409604 HDXQ7Z353 690 aa12□□□□□ -0.49
SNX13-202ENST00000409604 KCTD17Q8N5Z5 321 aa12□□□□□ -0.49
SNX13-202ENST00000409604 GDAP1Q8TB36 358 aa12□□□□□ -0.49
SNX13-202ENST00000409604 FBXO32Q969P5 355 aa12□□□□□ -0.49
SNX13-202ENST00000409604 STAU2Q9NUL3 570 aaKnown RBP eCLIP12□□□□□ -0.49
SNX13-202ENST00000409604 ANAPC5Q9UJX4 755 aa12□□□□□ -0.49
SNX13-202ENST00000409604 TSPAN1O60635 241 aa12□□□□□ -0.49
SNX13-202ENST00000409604 USP17L7P0C7H9 530 aa12□□□□□ -0.49
SNX13-202ENST00000409604 ITIH3Q06033 890 aa12□□□□□ -0.49
SNX13-202ENST00000409604 DDR2Q16832 855 aa12□□□□□ -0.49
SNX13-202ENST00000409604 C17orf99Q6UX52 265 aa12□□□□□ -0.49
SNX13-202ENST00000409604 MTERF4Q7Z6M4 381 aaKnown RBP12□□□□□ -0.49
SNX13-202ENST00000409604 RHOT1Q8IXI2 618 aa12□□□□□ -0.49
SNX13-202ENST00000409604 ABRAQ8N0Z2 381 aa12□□□□□ -0.49
SNX13-202ENST00000409604 ATAD1Q8NBU5 361 aa12□□□□□ -0.49
SNX13-202ENST00000409604 CFAP36Q96G28 342 aa12□□□□□ -0.49
SNX13-202ENST00000409604 IP6K2Q9UHH9 426 aa12□□□□□ -0.49
SNX13-202ENST00000409604 N4BP2Q86UW6 1770 aaPredicted RBP12□□□□□ -0.49
SNX13-202ENST00000409604 SLC26A4O43511 780 aa12□□□□□ -0.49
SNX13-202ENST00000409604 HCRTO43612 131 aa12□□□□□ -0.49
SNX13-202ENST00000409604 PID1Q7Z2X4 250 aa12□□□□□ -0.49
SNX13-202ENST00000409604 AUTS2Q8WXX7 1259 aa12□□□□□ -0.49
SNX13-202ENST00000409604 ARHGEF26Q96DR7 871 aa12□□□□□ -0.49
SNX13-202ENST00000409604 ATXN7L3BQ96GX2 97 aa12□□□□□ -0.49
SNX13-202ENST00000409604 B3GNT5Q9BYG0 378 aa12□□□□□ -0.49
SNX13-202ENST00000409604 SAMD15Q9P1V8 674 aa12□□□□□ -0.49
SNX13-202ENST00000409604 E5RJQ4 531 aa11.99□□□□□ -0.49
SNX13-202ENST00000409604 CST8O60676 142 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms