RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 ADORA2BP29275 332 aa16.65■□□□□ 0.26
SHANK2-204ENST00000409530 FPGSQ05932 587 aa16.65■□□□□ 0.26
SHANK2-204ENST00000409530 UBA3Q8TBC4 463 aa16.65■□□□□ 0.26
SHANK2-204ENST00000409530 DPF3Q92784 378 aa16.65■□□□□ 0.26
SHANK2-204ENST00000409530 C11orf70Q9BRQ4 267 aa16.65■□□□□ 0.26
SHANK2-204ENST00000409530 DDX43Q9NXZ2 648 aaKnown RBP16.65■□□□□ 0.26
SHANK2-204ENST00000409530 SALL4Q9UJQ4 1053 aa16.65■□□□□ 0.26
SHANK2-204ENST00000409530 RANBP2P49792 3224 aaKnown RBP16.65■□□□□ 0.26
SHANK2-204ENST00000409530 MYH10P35580 1976 aa16.65■□□□□ 0.26
SHANK2-204ENST00000409530 AMHP03971 560 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 H2AFZP0C0S5 128 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 EPHB4P54760 987 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 DSC1Q08554 894 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 CLEC16AQ2KHT3 1053 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 SGO2Q562F6 1265 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 ZNF569Q5MCW4 686 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 DENND1BQ6P3S1 775 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 ZNF365Q70YC5 407 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 H2AFVQ71UI9 128 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 CEP57Q86XR8 500 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 ARHGEF26Q96DR7 871 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 IL23AQ9NPF7 189 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 KANSL3Q9P2N6 904 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 DNAI1Q9UI46 699 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 HOXA2O43364 376 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 ODC1P11926 461 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 NOP2P46087 812 aaKnown RBP16.64■□□□□ 0.25
SHANK2-204ENST00000409530 NSFP46459 744 aaKnown RBP16.64■□□□□ 0.25
SHANK2-204ENST00000409530 SLC11A1P49279 550 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 GOLGA7BQ2TAP0 167 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 TMEM173Q86WV6 379 aaPredicted RBP16.64■□□□□ 0.25
SHANK2-204ENST00000409530 LRRC43Q8N309 656 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 TOP6BLQ8N6T0 577 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 CTNNBL1Q8WYA6 563 aaPredicted RBP16.64■□□□□ 0.25
SHANK2-204ENST00000409530 ZNF653Q96CK0 615 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 DDX27Q96GQ7 796 aaKnown RBP16.64■□□□□ 0.25
SHANK2-204ENST00000409530 UROC1Q96N76 676 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 GOLPH3Q9H4A6 298 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 CAPN6Q9Y6Q1 641 aa16.64■□□□□ 0.25
SHANK2-204ENST00000409530 LAMA3Q16787 3333 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 ABHD14A-ACY1A0A1B0GW23 586 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 GOLGA6L9A6NEM1 432 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 NRP1O14786 923 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 KIF5CO60282 957 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 TADA2AO75478 443 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 CSPG5O95196 566 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 PPP1R26Q5T8A7 1209 aaPredicted RBP16.63■□□□□ 0.25
SHANK2-204ENST00000409530 CD300LGQ6UXG3 332 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 MMS22LQ6ZRQ5 1243 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 NYAP1Q6ZVC0 841 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 C16orf59Q7L2K0 433 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 RSPH1Q8WYR4 309 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 SECISBP2LQ93073 1101 aaKnown RBP16.63■□□□□ 0.25
SHANK2-204ENST00000409530 WDR24Q96S15 920 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 TSPAN16Q9UKR8 245 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 NENFQ9UMX5 172 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 STXBP5LQ9Y2K9 1186 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 INPPL1O15357 1258 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 MICAL2O94851 1124 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 PAEPP09466 180 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 TKTP29401 623 aaKnown RBP16.63■□□□□ 0.25
SHANK2-204ENST00000409530 DNA2P51530 1060 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 NOMO3P69849 1222 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 MDH1BQ5I0G3 518 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 ZNF677Q86XU0 584 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 CRIPAKQ8N1N5 446 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 SLC35F6Q8N357 371 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 ABHD8Q96I13 439 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 MRPL9Q9BYD2 267 aaKnown RBP16.63■□□□□ 0.25
SHANK2-204ENST00000409530 OSGEPQ9NPF4 335 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 ST7Q9NRC1 585 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 KCND1Q9NSA2 647 aa16.63■□□□□ 0.25
SHANK2-204ENST00000409530 CXXC1Q9P0U4 656 aaPredicted RBP16.63■□□□□ 0.25
SHANK2-204ENST00000409530 MED7O43513 233 aa16.62■□□□□ 0.25
SHANK2-204ENST00000409530 RTN2O75298 545 aa16.62■□□□□ 0.25
SHANK2-204ENST00000409530 ANXA13P27216 316 aa16.62■□□□□ 0.25
SHANK2-204ENST00000409530 CYP4A22Q5TCH4 519 aa16.62■□□□□ 0.25
SHANK2-204ENST00000409530 DCLRE1AQ6PJP8 1040 aa16.62■□□□□ 0.25
SHANK2-204ENST00000409530 YME1L1Q96TA2 773 aa16.62■□□□□ 0.25
SHANK2-204ENST00000409530 TSGA10Q9BZW7 698 aa16.62■□□□□ 0.25
SHANK2-204ENST00000409530 TJP2Q9UDY2 1190 aa16.62■□□□□ 0.25
SHANK2-204ENST00000409530 CEP83Q9Y592 693 aa16.62■□□□□ 0.25
SHANK2-204ENST00000409530 COL4A6Q14031 1691 aa16.62■□□□□ 0.25
SHANK2-204ENST00000409530 O00370 1275 aa16.61■□□□□ 0.25
SHANK2-204ENST00000409530 CLDN5O00501 218 aa16.61■□□□□ 0.25
SHANK2-204ENST00000409530 TACC1O75410 805 aa16.61■□□□□ 0.25
SHANK2-204ENST00000409530 DGKIO75912 1065 aa16.61■□□□□ 0.25
SHANK2-204ENST00000409530 GJB6O95452 261 aa16.61■□□□□ 0.25
SHANK2-204ENST00000409530 RGS7P49802 495 aa16.61■□□□□ 0.25
SHANK2-204ENST00000409530 RABGGTBP53611 331 aa16.61■□□□□ 0.25
SHANK2-204ENST00000409530 PPIGQ13427 754 aaKnown RBP eCLIP16.61■□□□□ 0.255e-8■□□□□ 10.7
SHANK2-204ENST00000409530 KIAA0319Q5VV43 1072 aa16.61■□□□□ 0.25
SHANK2-204ENST00000409530 B3GALNT2Q8NCR0 500 aa16.61■□□□□ 0.25
SHANK2-204ENST00000409530 SLC2A14Q8TDB8 520 aa16.61■□□□□ 0.25
SHANK2-204ENST00000409530 TOP1MTQ969P6 601 aa16.61■□□□□ 0.25
SHANK2-204ENST00000409530 TMEM209Q96SK2 561 aa16.61■□□□□ 0.25
SHANK2-204ENST00000409530 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.61■□□□□ 0.255e-7■□□□□ 9.5
SHANK2-204ENST00000409530 MED10Q9BTT4 135 aa16.61■□□□□ 0.25
SHANK2-204ENST00000409530 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.61■□□□□ 0.25
SHANK2-204ENST00000409530 FAN1Q9Y2M0 1017 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms