RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 F5H5T6 163 aa26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 ATMINO43313 823 aaPredicted RBP26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 AGO4Q9HCK5 861 aaKnown RBP26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 SEC23IPQ9Y6Y8 1000 aaKnown RBP26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 CHUKO15111 745 aa26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 NPTX2P47972 431 aa26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 ADGRF2Q8IZF7 708 aa26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 MTMR12Q9C0I1 747 aa26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 GARTP22102 1010 aa26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 HSPA9P38646 679 aaKnown RBP26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 RABGAP1LQ5R372 815 aa26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 MS4A14Q96JA4 679 aa26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 ING2Q9H160 280 aa26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 NFIBO00712 420 aa26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 VDRP11473 427 aa26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 USP13Q92995 863 aaPredicted RBP26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 RPRD1AQ96P16 312 aaPredicted RBP26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 MTG1Q9BT17 334 aaPredicted RBP26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 WWP1Q9H0M0 922 aa26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 CD274Q9NZQ7 290 aa26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 ZRANB3Q5FWF4 1079 aa26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 RASGRP2Q7LDG7 609 aa26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 TRIML2Q8N7C3 387 aa26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 SYTL5Q8TDW5 730 aaPredicted RBP26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 GRAMD1AQ96CP6 724 aa26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 CPB2Q96IY4 423 aa26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 TAF6LQ9Y6J9 622 aa26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 STRNO43815 780 aa26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 SPRP35270 261 aaPredicted RBP26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 POLD3Q15054 466 aaPredicted RBP26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 MTFR1Q15390 333 aa26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 SPAG6O75602 509 aa26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 ZNF200P98182 395 aaPredicted RBP26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 CENPCQ03188 943 aa26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 SNX31Q8N9S9 440 aa26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 NIPSNAP3AQ9UFN0 247 aaPredicted RBP26.17■■□□□ 1.78
SPIRE1-202ENST00000409402 FXR1P51114 621 aaKnown RBP eCLIP26.16■■□□□ 1.78
SPIRE1-202ENST00000409402 PTK6Q13882 451 aa26.16■■□□□ 1.78
SPIRE1-202ENST00000409402 HS6ST3Q8IZP7 471 aa26.16■■□□□ 1.78
SPIRE1-202ENST00000409402 SHCBP1Q8NEM2 672 aa26.16■■□□□ 1.78
SPIRE1-202ENST00000409402 TRIM51Q9BSJ1 452 aa26.16■■□□□ 1.78
SPIRE1-202ENST00000409402 SMG5Q9UPR3 1016 aaKnown RBP26.16■■□□□ 1.78
SPIRE1-202ENST00000409402 MCF2P10911 925 aa26.16■■□□□ 1.78
SPIRE1-202ENST00000409402 ACAD10Q6JQN1 1059 aa26.16■■□□□ 1.78
SPIRE1-202ENST00000409402 LRRC1Q9BTT6 524 aa26.16■■□□□ 1.78
SPIRE1-202ENST00000409402 DPP7Q9UHL4 492 aa26.16■■□□□ 1.78
SPIRE1-202ENST00000409402 POLR1AO95602 1720 aaPredicted RBP26.16■■□□□ 1.78
SPIRE1-202ENST00000409402 PDCD2LQ9BRP1 358 aa26.16■■□□□ 1.78
SPIRE1-202ENST00000409402 FOXP3Q9BZS1 431 aa26.16■■□□□ 1.78
SPIRE1-202ENST00000409402 TRIM4Q9C037 500 aa26.16■■□□□ 1.78
SPIRE1-202ENST00000409402 ANXA9O76027 345 aa26.16■■□□□ 1.78
SPIRE1-202ENST00000409402 LINC00523Q86TU6 105 aa26.16■■□□□ 1.78
SPIRE1-202ENST00000409402 RUBCNLQ9H714 662 aa26.16■■□□□ 1.78
SPIRE1-202ENST00000409402 PCDHB12Q9Y5F1 795 aa26.16■■□□□ 1.78
SPIRE1-202ENST00000409402 RNF103-CHMP3A0A140T963 221 aa26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 TTLL13PA6NNM8 815 aa26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 COG1Q8WTW3 980 aa26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 CGRRF1Q99675 332 aa26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 PPCSQ9HAB8 311 aa26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 TASP1Q9H6P5 420 aa26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 STAU2Q9NUL3 570 aaKnown RBP eCLIP26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 TRPM5Q9NZQ8 1165 aa26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 MST1RQ04912 1400 aa26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 H3BRB1 525 aa26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 ZNF185O15231 689 aa26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 EEF1DP29692 281 aaKnown RBP26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 PPP3CCP48454 512 aa26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 ACOT1Q86TX2 421 aa26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 TFB1MQ8WVM0 346 aaKnown RBP26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 TUT1Q9H6E5 874 aaKnown RBP26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 CRLS1Q9UJA2 301 aa26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 SUPT3HB4E1H0 165 aa26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 GOLGA8RI6L899 631 aa26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 ANGPT2O15123 496 aa26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 ZNF286BP0CG31 522 aa26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 TGFB3P10600 412 aa26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 C4orf19Q8IY42 314 aa26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 SOCS4Q8WXH5 440 aa26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 AKT1S1Q96B36 256 aa26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 SELENONQ9NZV5 590 aa26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 PSMC3IPQ9P2W1 217 aaPredicted RBP26.15■■□□□ 1.78
SPIRE1-202ENST00000409402 LHX1P48742 406 aa26.14■■□□□ 1.78
SPIRE1-202ENST00000409402 KRT72Q14CN4 511 aa26.14■■□□□ 1.78
SPIRE1-202ENST00000409402 ZNF280DQ6N043 979 aa26.14■■□□□ 1.78
SPIRE1-202ENST00000409402 RBP3P10745 1247 aa26.14■■□□□ 1.78
SPIRE1-202ENST00000409402 PTGER2P43116 358 aa26.14■■□□□ 1.78
SPIRE1-202ENST00000409402 EPHB3P54753 998 aa26.14■■□□□ 1.78
SPIRE1-202ENST00000409402 GJB7Q6PEY0 223 aa26.14■■□□□ 1.78
SPIRE1-202ENST00000409402 RGS9BPQ6ZS82 235 aa26.14■■□□□ 1.78
SPIRE1-202ENST00000409402 CKMP06732 381 aa26.14■■□□□ 1.78
SPIRE1-202ENST00000409402 ATP6V1E1P36543 226 aa26.14■■□□□ 1.78
SPIRE1-202ENST00000409402 NAF1Q96HR8 494 aaKnown RBP26.14■■□□□ 1.78
SPIRE1-202ENST00000409402 SYCE1LA8MT33 242 aa26.14■■□□□ 1.77
SPIRE1-202ENST00000409402 RSPH10B2B2RC85 870 aa26.14■■□□□ 1.77
SPIRE1-202ENST00000409402 RSPH10BP0C881 870 aa26.14■■□□□ 1.77
SPIRE1-202ENST00000409402 ELAVL2Q12926 359 aaKnown RBP26.14■■□□□ 1.77
SPIRE1-202ENST00000409402 BHMTQ93088 406 aa26.14■■□□□ 1.77
SPIRE1-202ENST00000409402 SLC25A13Q9UJS0 675 aa26.14■■□□□ 1.77
SPIRE1-202ENST00000409402 ALG6Q9Y672 507 aa26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms