RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 RBP3P10745 1247 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 SERPINB4P48594 390 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 MARSP56192 900 aaKnown RBP8.75□□□□□ -1.01
SNX13-201ENST00000409076 EIF3EP60228 445 aaKnown RBP8.75□□□□□ -1.01
SNX13-201ENST00000409076 CYP24A1Q07973 514 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 FSTL1Q12841 308 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 PTK7Q13308 1070 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 ORC2Q13416 577 aaPredicted RBP8.75□□□□□ -1.01
SNX13-201ENST00000409076 XRCC4Q13426 336 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 MAPK6Q16659 721 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 GLRA4Q5JXX5 417 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 TDRD10Q5VZ19 366 aaKnown RBP8.75□□□□□ -1.01
SNX13-201ENST00000409076 HHIPL2Q6UWX4 724 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 NME8Q8N427 588 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 JOSD2Q8TAC2 188 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 SYTL5Q8TDW5 730 aaPredicted RBP8.75□□□□□ -1.01
SNX13-201ENST00000409076 CKAP2Q8WWK9 683 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 SLC7A3Q8WY07 619 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 RUBCNQ92622 972 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 NAF1Q96HR8 494 aaKnown RBP8.75□□□□□ -1.01
SNX13-201ENST00000409076 TSC22D3Q99576 134 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 APOL2Q9BQE5 337 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 LPIN3Q9BQK8 851 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 TSSK1BQ9BXA7 367 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 UGT1A7Q9HAW7 530 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 UGT1A10Q9HAW8 530 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 UGT1A8Q9HAW9 530 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 TMEM8AQ9HCN3 771 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 ARL8BQ9NVJ2 186 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 NOCTQ9UK39 431 aaKnown RBP8.75□□□□□ -1.01
SNX13-201ENST00000409076 UBE4BO95155 1302 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 TRIM49D1C9J1S8 452 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 I3L4J1 428 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 KCNN4O15554 427 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 MT-CO1P00395 513 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 GNAT1P11488 350 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 SMARCA1P28370 1054 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 TUBP50607 506 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 FAAP100Q0VG06 881 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 GRAMD1BQ3KR37 738 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 HYIQ5T013 277 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 C1orf220Q5T0J3 134 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 C1orf146Q5VVC0 180 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 TRMT10CQ7L0Y3 403 aaKnown RBP8.75□□□□□ -1.01
SNX13-201ENST00000409076 OTOAQ7RTW8 1153 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 UNC5BQ8IZJ1 945 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 SLC26A7Q8TE54 656 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 ZDHHC15Q96MV8 337 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 WRNIP1Q96S55 665 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 MAGEB5Q9BZ81 275 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 ZNF408Q9H9D4 720 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 IFT122Q9HBG6 1241 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 TIAM2Q8IVF5 1701 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 GOLGA8QA0A0J9YX86 632 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 GOLGA8OA6NCC3 632 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 GOLGA8NF8WBI6 632 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 COPEO14579 308 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 TBX3O15119 743 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 ASAP2O43150 1006 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 HSPA6P17066 643 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 PGM1P36871 562 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 ELK3P41970 407 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 ZNF699Q32M78 642 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 MSS51Q4VC12 460 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 RC3H1Q5TC82 1133 aaKnown RBP8.75□□□□□ -1.01
SNX13-201ENST00000409076 PDIK1LQ8N165 341 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 FAM13CQ8NE31 585 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 SPATA18Q8TC71 538 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 HELQQ8TDG4 1101 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 ZNF516Q92618 1163 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 VPS11Q9H270 941 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 CPSF2Q9P2I0 782 aaKnown RBP8.75□□□□□ -1.01
SNX13-201ENST00000409076 ADAMTSL3P82987 1691 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 YDJCA8MPS7 323 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 ZNF862O60290 1169 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 LYPLA1O75608 230 aaPredicted RBP8.74□□□□□ -1.01
SNX13-201ENST00000409076 DNAJC8O75937 253 aaPredicted RBP8.74□□□□□ -1.01
SNX13-201ENST00000409076 PGK2P07205 417 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 NELFEP18615 380 aaKnown RBP8.74□□□□□ -1.01
SNX13-201ENST00000409076 RFC1P35251 1148 aaPredicted RBP8.74□□□□□ -1.01
SNX13-201ENST00000409076 COBLL1Q53SF7 1204 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 FNBP1LQ5T0N5 605 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 DPY19L2P1Q6NXN4 242 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 UNC45BQ8IWX7 931 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 FAM71AQ8IYT1 594 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 FIZ1Q96SL8 496 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 TMEM120AQ9BXJ8 343 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 RXFP1Q9HBX9 757 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 APOBEC3GQ9HC16 384 aaKnown RBP8.74□□□□□ -1.01
SNX13-201ENST00000409076 AGO4Q9HCK5 861 aaKnown RBP8.74□□□□□ -1.01
SNX13-201ENST00000409076 GRID1Q9ULK0 1009 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 FNDC3AQ9Y2H6 1198 aaKnown RBP8.74□□□□□ -1.01
SNX13-201ENST00000409076 PCDHA10Q9Y5I2 948 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 USP12O75317 370 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 TJP3O95049 919 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 NUDT17P0C025 328 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 CIITAP33076 1130 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 PTDSS1P48651 473 aaKnown RBP8.74□□□□□ -1.01
SNX13-201ENST00000409076 YARSP54577 528 aaKnown RBP8.74□□□□□ -1.01
SNX13-201ENST00000409076 CLUL1Q15846 466 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms