RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 APOL4Q9BPW4 351 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 LRRC1Q9BTT6 524 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 NT5C1AQ9BXI3 368 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 JPH1Q9HDC5 661 aaPredicted RBP6.35□□□□□ -1.39
SCN1A-203ENST00000409050 ANKRD6Q9Y2G4 727 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 SF3B1O75533 1304 aaKnown RBP eCLIP6.35□□□□□ -1.39
SCN1A-203ENST00000409050 NEDD4P46934 1319 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 AFF2P51816 1311 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 B2RBV5 119 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 KPNA4O00629 521 aaPredicted RBP6.35□□□□□ -1.39
SCN1A-203ENST00000409050 DNAJC6O75061 913 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 GUCA1CO95843 209 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 MPOP05164 745 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 ATICP31939 592 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 PIK3CGP48736 1102 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 DAB2P98082 770 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 PRKCQQ04759 706 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 CHRNB3Q05901 458 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 C1DQ13901 141 aaKnown RBP6.35□□□□□ -1.39
SCN1A-203ENST00000409050 NCF4Q15080 339 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 NDUFA5Q16718 116 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 ACBD5Q5T8D3 534 aaPredicted RBP6.35□□□□□ -1.39
SCN1A-203ENST00000409050 C11orf63Q6NUN7 778 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 ZDHHC17Q8IUH5 632 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 UNC45BQ8IWX7 931 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 ERP27Q96DN0 273 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 ZFP42Q96MM3 310 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 CATSPER2Q96P56 530 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 AMACRQ9UHK6 382 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 KCNN4O15554 427 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 LZTS3O60299 673 aaPredicted RBP6.35□□□□□ -1.39
SCN1A-203ENST00000409050 PDE9AO76083 593 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 CYP2C9P11712 490 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 NQO1P15559 274 aaKnown RBP6.35□□□□□ -1.39
SCN1A-203ENST00000409050 YY1P25490 414 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 RPL22P35268 128 aaKnown RBP6.35□□□□□ -1.39
SCN1A-203ENST00000409050 SULT1E1P49888 294 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 CACNB1Q02641 598 aaPredicted RBP6.35□□□□□ -1.39
SCN1A-203ENST00000409050 ANKRD40Q6AI12 368 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 TAS2R42Q7RTR8 314 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 METTL16Q86W50 562 aaKnown RBP6.35□□□□□ -1.39
SCN1A-203ENST00000409050 SPATA2LQ8IUW3 424 aaPredicted RBP6.35□□□□□ -1.39
SCN1A-203ENST00000409050 ATP6V0D2Q8N8Y2 350 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 HIPK4Q8NE63 616 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 ZNF398Q8TD17 642 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 SEPT1Q8WYJ6 367 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 PRKD2Q9BZL6 878 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 VCPKMTQ9H867 229 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 GABBR1Q9UBS5 961 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 TAGLN3Q9UI15 199 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 AURKCQ9UQB9 309 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 TULP4Q9NRJ4 1543 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 TMEM120BA0PK00 339 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 CENPXA8MT69 81 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 EEF2KO00418 725 aaKnown RBP6.35□□□□□ -1.39
SCN1A-203ENST00000409050 STX7O15400 261 aaKnown RBP6.35□□□□□ -1.39
SCN1A-203ENST00000409050 GH2P01242 217 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 ENO1P06733 434 aaKnown RBP6.35□□□□□ -1.39
SCN1A-203ENST00000409050 RARBP10826 455 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 PDGFRAP16234 1089 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 PSMC3P17980 439 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 YWHABP31946 246 aaKnown RBP6.35□□□□□ -1.39
SCN1A-203ENST00000409050 SLC26A2P50443 739 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 MAPK7Q13164 816 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 MICU2Q8IYU8 434 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 TRPC7Q9HCX4 862 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 SLC40A1Q9NP59 571 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 KCND1Q9NSA2 647 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 FAM217BQ9NTX9 383 aaPredicted RBP6.35□□□□□ -1.39
SCN1A-203ENST00000409050 TMEM161AQ9NX61 479 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 DSEQ9UL01 958 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 SYNPO2Q9UMS6 1093 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 POTEMA6NI47 508 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 PI4K2BG5E9Z4 385 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 NEMP1O14524 444 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 CD3EAPO15446 510 aaKnown RBP6.35□□□□□ -1.39
SCN1A-203ENST00000409050 HOXA2O43364 376 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 CD2BP2O95400 341 aaKnown RBP6.35□□□□□ -1.39
SCN1A-203ENST00000409050 PTPN4P29074 926 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 ACTN3Q08043 901 aaPredicted RBP6.35□□□□□ -1.39
SCN1A-203ENST00000409050 ZNF543Q08ER8 600 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 TMEM132DQ14C87 1099 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 CCDC153Q494R4 210 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 ACAD10Q6JQN1 1059 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 FAM45BPQ6NSW5 357 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 LRRC6Q86X45 466 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 NT5DC4Q86YG4 428 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 SLC13A5Q86YT5 568 aaPredicted RBP6.35□□□□□ -1.39
SCN1A-203ENST00000409050 RBBP8NLQ8NC74 664 aaPredicted RBP6.35□□□□□ -1.39
SCN1A-203ENST00000409050 LRRC39Q96DD0 335 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 UNC45AQ9H3U1 944 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 LRRC40Q9H9A6 602 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 NEK6Q9HC98 313 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 SHOC2Q9UQ13 582 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 TMEM94Q12767 1356 aa6.35□□□□□ -1.39
SCN1A-203ENST00000409050 MROH7Q68CQ1 1323 aa6.34□□□□□ -1.39
SCN1A-203ENST00000409050 GSG1L2A8MUP6 293 aa6.34□□□□□ -1.39
SCN1A-203ENST00000409050 F5H6K3 240 aa6.34□□□□□ -1.39
SCN1A-203ENST00000409050 ABLIM1O14639 778 aa6.34□□□□□ -1.39
SCN1A-203ENST00000409050 HBP1O60381 514 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms