RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 UGP2Q16851 508 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 ZFP1Q6P2D0 407 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 DEFB107AQ8IZN7 70 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 SLC25A41Q8N5S1 370 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 SCFD2Q8WU76 684 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 MCEEQ96PE7 176 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 RBAKQ9NYW8 714 aaPredicted RBP18.44■□□□□ 0.54
SMPD4-202ENST00000409031 SHOC2Q9UQ13 582 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 NPTXRO95502 500 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 OSTNP61366 133 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 OTUD4Q01804 1114 aaKnown RBP18.44■□□□□ 0.54
SMPD4-202ENST00000409031 TBL3Q12788 808 aaKnown RBP18.44■□□□□ 0.54
SMPD4-202ENST00000409031 TNIP2Q8NFZ5 429 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 TCP10LQ8TDR4 215 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 ATXN7L3BQ96GX2 97 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 ASPSCR1Q9BZE9 553 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 BBOX1O75936 387 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 EIF2AK2P19525 551 aaKnown RBP18.43■□□□□ 0.54
SMPD4-202ENST00000409031 CLK1P49759 484 aaKnown RBP18.43■□□□□ 0.54
SMPD4-202ENST00000409031 C21orf59P57076 290 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 MTM1Q13496 603 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 DOK7Q18PE1 504 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 KBTBD12Q3ZCT8 623 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 HABP4Q5JVS0 413 aaKnown RBP18.43■□□□□ 0.54
SMPD4-202ENST00000409031 MAB21L3Q8N8X9 362 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 SPATA20Q8TB22 786 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 RMND5BQ96G75 393 aaPredicted RBP18.43■□□□□ 0.54
SMPD4-202ENST00000409031 CNGB3Q9NQW8 809 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 ABCA9Q8IUA7 1624 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 BTNL10A8MVZ5 291 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 PSMC5P62195 406 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 ZNF268Q14587 947 aaPredicted RBP18.43■□□□□ 0.54
SMPD4-202ENST00000409031 DNAJC16Q9Y2G8 782 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 SNX13Q9Y5W8 968 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 M0QYV0 167 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 KCNQ4P56696 695 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 ZNF543Q08ER8 600 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 TTC39CQ8N584 583 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 AGPAT3Q9NRZ7 376 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 AGO2Q9UKV8 859 aaKnown RBP18.43■□□□□ 0.54
SMPD4-202ENST00000409031 AKR1B1P15121 316 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 MCL1Q07820 350 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 ZBTB49Q6ZSB9 765 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 ARMCX2Q7L311 632 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 LENG1Q96BZ8 264 aaPredicted RBP18.43■□□□□ 0.54
SMPD4-202ENST00000409031 UBXN6Q9BZV1 441 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 NACA2Q9H009 215 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 DHX35Q9H5Z1 703 aaKnown RBP18.43■□□□□ 0.54
SMPD4-202ENST00000409031 LRRC4BQ9NT99 713 aa18.43■□□□□ 0.54
SMPD4-202ENST00000409031 RARAP10276 462 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 MLH1P40692 756 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 SYCP2LQ5T4T6 812 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 FRA10AC1Q70Z53 315 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 PID1Q7Z2X4 250 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 HORMAD1Q86X24 394 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 THNSL1Q8IYQ7 743 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 MICU2Q8IYU8 434 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 SCFD1Q8WVM8 642 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 AS3MTQ9HBK9 375 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 CLIC5Q9NZA1 410 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 OVOS2A0A0J9YW53 1432 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 OVOS2Q6IE36 1432 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 PPIP5K2O43314 1243 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 KRT36O76013 467 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 VCPP55072 806 aaKnown RBP18.42■□□□□ 0.54
SMPD4-202ENST00000409031 NET1Q7Z628 596 aaPredicted RBP18.42■□□□□ 0.54
SMPD4-202ENST00000409031 NDEL1Q9GZM8 345 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 DPPA5A6NC42 116 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 DDX3XO00571 662 aaKnown RBP eCLIP18.42■□□□□ 0.542e-8■■■□□ 15.4
SMPD4-202ENST00000409031 HNRNPRO43390 633 aaKnown RBP18.42■□□□□ 0.54
SMPD4-202ENST00000409031 ALADP13716 330 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 BNIP1Q12981 228 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 PDAP1Q13442 181 aaKnown RBP18.42■□□□□ 0.54
SMPD4-202ENST00000409031 EXD1Q8NHP7 514 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 FAM217BQ9NTX9 383 aaPredicted RBP18.42■□□□□ 0.54
SMPD4-202ENST00000409031 KIF17Q9P2E2 1029 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 DCDC2Q9UHG0 476 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 CDC42BPGQ6DT37 1551 aa18.42■□□□□ 0.54
SMPD4-202ENST00000409031 SERPINI2O75830 405 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 OATP04181 439 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 RPS6P62753 249 aaKnown RBP18.41■□□□□ 0.54
SMPD4-202ENST00000409031 TSHZ1Q6ZSZ6 1077 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 IFNEQ86WN2 208 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 PGBD4Q96DM1 585 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 BRD8Q9H0E9 1235 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 TASP1Q9H6P5 420 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 GALNT8Q9NY28 637 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 TCP10L2B9ZVM9 353 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 AP3B1O00203 1094 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 APOA4P06727 396 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 RAG1P15918 1043 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 KCTD21Q4G0X4 260 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 DUPD1Q68J44 220 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 EXOC3L1Q86VI1 746 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 DDIASQ8IXT1 998 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 MYRFQ9Y2G1 1151 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 TRPC5OSA6NMA1 111 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 ATP1A4Q13733 1029 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 ITGA9Q13797 1035 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 PKN2Q16513 984 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms