RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 COL20A1Q9P218 1284 aa17.24■□□□□ 0.35
CDK11B-204ENST00000407249 ANAPC5Q9UJX4 755 aa17.24■□□□□ 0.35
CDK11B-204ENST00000407249 SORBS3O60504 671 aa17.24■□□□□ 0.35
CDK11B-204ENST00000407249 ATF2P15336 505 aa17.24■□□□□ 0.35
CDK11B-204ENST00000407249 ARPC4P59998 168 aa17.24■□□□□ 0.35
CDK11B-204ENST00000407249 CDR2Q01850 454 aa17.24■□□□□ 0.35
CDK11B-204ENST00000407249 DMPKQ09013 629 aa17.24■□□□□ 0.35
CDK11B-204ENST00000407249 TKFCQ3LXA3 575 aa17.24■□□□□ 0.35
CDK11B-204ENST00000407249 XXYLT1Q8NBI6 393 aa17.24■□□□□ 0.35
CDK11B-204ENST00000407249 HERPUD2Q9BSE4 406 aa17.24■□□□□ 0.35
CDK11B-204ENST00000407249 TCHPQ9BT92 498 aa17.24■□□□□ 0.35
CDK11B-204ENST00000407249 OCEL1Q9H607 264 aa17.24■□□□□ 0.35
CDK11B-204ENST00000407249 AGO4Q9HCK5 861 aaKnown RBP17.24■□□□□ 0.35
CDK11B-204ENST00000407249 KCNH7Q9NS40 1196 aa17.24■□□□□ 0.35
CDK11B-204ENST00000407249 EURLQ9NYK6 297 aa17.24■□□□□ 0.35
CDK11B-204ENST00000407249 LYPLA2O95372 231 aa17.23■□□□□ 0.35
CDK11B-204ENST00000407249 ADCY8P40145 1251 aa17.23■□□□□ 0.35
CDK11B-204ENST00000407249 CPXCR1Q8N123 301 aa17.23■□□□□ 0.35
CDK11B-204ENST00000407249 GRK7Q8WTQ7 553 aa17.23■□□□□ 0.35
CDK11B-204ENST00000407249 RAB3IPQ96QF0 476 aaPredicted RBP17.23■□□□□ 0.35
CDK11B-204ENST00000407249 DCLK3Q9C098 648 aa17.23■□□□□ 0.35
CDK11B-204ENST00000407249 HSPBP1Q9NZL4 362 aa17.23■□□□□ 0.35
CDK11B-204ENST00000407249 ZNF541Q9H0D2 1346 aa17.23■□□□□ 0.35
CDK11B-204ENST00000407249 P4HBP07237 508 aaKnown RBP17.23■□□□□ 0.35
CDK11B-204ENST00000407249 MFAP3P55082 362 aa17.23■□□□□ 0.35
CDK11B-204ENST00000407249 ALCAMQ13740 583 aa17.23■□□□□ 0.35
CDK11B-204ENST00000407249 NOL9Q5SY16 702 aaKnown RBP17.23■□□□□ 0.35
CDK11B-204ENST00000407249 PADI6Q6TGC4 694 aa17.23■□□□□ 0.35
CDK11B-204ENST00000407249 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.23■□□□□ 0.35
CDK11B-204ENST00000407249 TIPINQ9BVW5 301 aa17.23■□□□□ 0.35
CDK11B-204ENST00000407249 TXLNGQ9NUQ3 528 aa17.23■□□□□ 0.35
CDK11B-204ENST00000407249 LARSQ9P2J5 1176 aaKnown RBP17.23■□□□□ 0.35
CDK11B-204ENST00000407249 ASTN2O75129 1339 aaPredicted RBP17.22■□□□□ 0.35
CDK11B-204ENST00000407249 VWA5AO00534 786 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 GRIN3BO60391 1043 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 PTPRAP18433 802 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 ENPP1P22413 925 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 WDR4P57081 412 aaKnown RBP17.22■□□□□ 0.35
CDK11B-204ENST00000407249 IL9RQ01113 521 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 SPP2Q13103 211 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 R3HDM1Q15032 1099 aaKnown RBP17.22■□□□□ 0.35
CDK11B-204ENST00000407249 MAEAQ7L5Y9 396 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 RELL1Q8IUW5 271 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 NDNQ99608 321 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 LRMDAQ9H2I8 198 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 CIDEBQ9UHD4 219 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 NEU2Q9Y3R4 380 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 TIMM22Q9Y584 194 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 LDHAP00338 332 aaKnown RBP17.22■□□□□ 0.35
CDK11B-204ENST00000407249 MAPTP10636 758 aaKnown RBP17.22■□□□□ 0.35
CDK11B-204ENST00000407249 TCF7P36402 384 aaPredicted RBP17.22■□□□□ 0.35
CDK11B-204ENST00000407249 STAT4Q14765 748 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 PARP6Q2NL67 630 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 ACAD10Q6JQN1 1059 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 FAM47EQ6ZV65 393 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 ANKRD35Q8N283 1001 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 SREK1Q8WXA9 508 aaKnown RBP17.22■□□□□ 0.35
CDK11B-204ENST00000407249 DDX1Q92499 740 aaKnown RBP17.22■□□□□ 0.35
CDK11B-204ENST00000407249 SEMA4DQ92854 862 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 ACCSQ96QU6 501 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 WRNIP1Q96S55 665 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 MYLK2Q9H1R3 596 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 TCEAL9Q9UHQ7 104 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 ANAPC7Q9UJX3 599 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 MYH11P35749 1972 aa17.22■□□□□ 0.35
CDK11B-204ENST00000407249 PHIPQ8WWQ0 1821 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 FAM47DPA6NHR8 397 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 RASA4BC9J798 803 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 MAPK13O15264 365 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 RASA4O43374 803 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 PFDN1O60925 122 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 VPS41P49754 854 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 RPS6P62753 249 aaKnown RBP17.21■□□□□ 0.35
CDK11B-204ENST00000407249 MTMR1Q13613 665 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 PGM5Q15124 567 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 ANGEL2Q5VTE6 544 aaKnown RBP17.21■□□□□ 0.35
CDK11B-204ENST00000407249 RDM1Q8NG50 284 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 ANKRD27Q96NW4 1050 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 NR1H4Q96RI1 486 aaPredicted RBP17.21■□□□□ 0.35
CDK11B-204ENST00000407249 CCDC77Q9BR77 488 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 GPRC5DQ9NZD1 345 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 R3HDM2Q9Y2K5 976 aaKnown RBP17.21■□□□□ 0.35
CDK11B-204ENST00000407249 STARD13Q9Y3M8 1113 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 MYPNQ86TC9 1320 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 MAGEB2O15479 319 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 DHX15O43143 795 aaKnown RBP17.21■□□□□ 0.35
CDK11B-204ENST00000407249 TROVE2P10155 538 aaKnown RBP eCLIP17.21■□□□□ 0.35
CDK11B-204ENST00000407249 RRM1P23921 792 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 MAPK4P31152 587 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 JAK3P52333 1124 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 POLGP54098 1239 aaPredicted RBP17.21■□□□□ 0.35
CDK11B-204ENST00000407249 YARSP54577 528 aaKnown RBP17.21■□□□□ 0.35
CDK11B-204ENST00000407249 LRRC49Q8IUZ0 686 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 GPC2Q8N158 579 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 HELQQ8TDG4 1101 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 MAML1Q92585 1016 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 ERP27Q96DN0 273 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 C9orf72Q96LT7 481 aa17.21■□□□□ 0.35
CDK11B-204ENST00000407249 DMAP1Q9NPF5 467 aaPredicted RBP17.21■□□□□ 0.35
CDK11B-204ENST00000407249 SCAF8Q9UPN6 1271 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms