RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 KREMEN1Q96MU8 473 aa8.95□□□□□ -0.98
GPC3-203ENST00000406757 NT5C1BQ96P26 610 aa8.95□□□□□ -0.98
GPC3-203ENST00000406757 SDCBP2Q9H190 292 aa8.95□□□□□ -0.98
GPC3-203ENST00000406757 CWH43Q9H720 699 aa8.95□□□□□ -0.98
GPC3-203ENST00000406757 SLC38A7Q9NVC3 462 aa8.95□□□□□ -0.98
GPC3-203ENST00000406757 CLEC1BQ9P126 229 aa8.95□□□□□ -0.98
GPC3-203ENST00000406757 KANSL3Q9P2N6 904 aa8.95□□□□□ -0.98
GPC3-203ENST00000406757 PCDHGC5Q9Y5F6 944 aa8.95□□□□□ -0.98
GPC3-203ENST00000406757 TIMM13Q9Y5L4 95 aaPredicted RBP8.95□□□□□ -0.98
GPC3-203ENST00000406757 SNX9Q9Y5X1 595 aa8.95□□□□□ -0.98
GPC3-203ENST00000406757 TDRD15B5MCY1 1934 aaKnown RBP8.95□□□□□ -0.98
GPC3-203ENST00000406757 FNDC1Q4ZHG4 1894 aaPredicted RBP8.94□□□□□ -0.98
GPC3-203ENST00000406757 SCN1AP35498 2009 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 B3GAT3O94766 335 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 KIF4AO95239 1232 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 GYPCP04921 128 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 GALTP07902 379 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 UCHL3P15374 230 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 TRIM21P19474 475 aaKnown RBP8.94□□□□□ -0.98
GPC3-203ENST00000406757 CDC25BP30305 580 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 TAF6P49848 677 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 LILRA4P59901 499 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 ARID5AQ03989 594 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 DSC1Q08554 894 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 TBX2Q13207 712 aaPredicted RBP8.94□□□□□ -0.98
GPC3-203ENST00000406757 DRAP1Q14919 205 aaPredicted RBP8.94□□□□□ -0.98
GPC3-203ENST00000406757 ZNF667Q5HYK9 610 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 DMRTA1Q5VZB9 504 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 DSTYKQ6XUX3 929 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 CCDC186Q7Z3E2 898 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 CACNA2D4Q7Z3S7 1137 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 PPFIBP1Q86W92 1011 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 TMEM173Q86WV6 379 aaPredicted RBP8.94□□□□□ -0.98
GPC3-203ENST00000406757 CCDC150Q8NCX0 1101 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 BCL7CQ8WUZ0 217 aaPredicted RBP8.94□□□□□ -0.98
GPC3-203ENST00000406757 PPP2R3CQ969Q6 453 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 MSLNLQ96KJ4 702 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 B3GALT6Q96L58 329 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 ZNF830Q96NB3 372 aaPredicted RBP8.94□□□□□ -0.98
GPC3-203ENST00000406757 MMS19Q96T76 1030 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 LPIN3Q9BQK8 851 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 SMYD3Q9H7B4 428 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 PLCB1Q9NQ66 1216 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 APEX2Q9UBZ4 518 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 BARX2Q9UMQ3 279 aaPredicted RBP8.94□□□□□ -0.98
GPC3-203ENST00000406757 FAN1Q9Y2M0 1017 aa8.94□□□□□ -0.98
GPC3-203ENST00000406757 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.94□□□□□ -0.98
GPC3-203ENST00000406757 USP34Q70CQ2 3546 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 LRRC53A6NM62 1247 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 KPNA7A9QM74 516 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 FOXN3O00409 490 aaPredicted RBP8.93□□□□□ -0.98
GPC3-203ENST00000406757 CYB561D2O14569 222 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 PER2O15055 1255 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 TADA2AO75478 443 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 GFPT2O94808 682 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 GLP2RO95838 553 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 ALDH2P05091 517 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 SKILP12757 684 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 ATICP31939 592 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 RPL9P32969 192 aaKnown RBP8.93□□□□□ -0.98
GPC3-203ENST00000406757 KRT9P35527 623 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 ASPAP45381 313 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 TNNC1P63316 161 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 RBM10P98175 930 aaKnown RBP8.93□□□□□ -0.98
GPC3-203ENST00000406757 MYO1EQ12965 1108 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 CUL2Q13617 745 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 ZNF394Q53GI3 561 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 DCLRE1AQ6PJP8 1040 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 TAS1R1Q7RTX1 841 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.93□□□□□ -0.98
GPC3-203ENST00000406757 OSTM1Q86WC4 334 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 LRRC43Q8N309 656 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 EFHBQ8N7U6 833 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 SMRP1Q8NCR6 262 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 MICAL1Q8TDZ2 1067 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 BAP1Q92560 729 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 EDAQ92838 391 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 DDX27Q96GQ7 796 aaKnown RBP8.93□□□□□ -0.98
GPC3-203ENST00000406757 SENP8Q96LD8 212 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 TSPAN18Q96SJ8 248 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 MRPL45Q9BRJ2 306 aaKnown RBP8.93□□□□□ -0.98
GPC3-203ENST00000406757 NUP58Q9BVL2 599 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 NAA15Q9BXJ9 866 aaKnown RBP8.93□□□□□ -0.98
GPC3-203ENST00000406757 MRPL9Q9BYD2 267 aaKnown RBP8.93□□□□□ -0.98
GPC3-203ENST00000406757 IMPG2Q9BZV3 1241 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 TTYH3Q9C0H2 523 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 GPR88Q9GZN0 384 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 ACP6Q9NPH0 428 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 MARCH5Q9NX47 278 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 CAPN11Q9UMQ6 739 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 PCDHB4Q9Y5E5 795 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 ITIH6Q6UXX5 1313 aa8.93□□□□□ -0.98
GPC3-203ENST00000406757 MYO7AQ13402 2215 aa8.92□□□□□ -0.98
GPC3-203ENST00000406757 KIAA1671Q9BY89 1806 aa8.92□□□□□ -0.98
GPC3-203ENST00000406757 LOC730098B7Z3J9 87 aa8.92□□□□□ -0.98
GPC3-203ENST00000406757 AKR1B15C9JRZ8 316 aaPredicted RBP8.92□□□□□ -0.98
GPC3-203ENST00000406757 PTMAP06454 111 aaKnown RBP8.92□□□□□ -0.98
GPC3-203ENST00000406757 PDGFRBP09619 1106 aa8.92□□□□□ -0.98
GPC3-203ENST00000406757 KRT5P13647 590 aa8.92□□□□□ -0.98
GPC3-203ENST00000406757 ACO1P21399 889 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms