RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 CPPED1Q9BRF8 314 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 MAGEH1Q9H213 219 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 FAM83DQ9H4H8 585 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 CD320Q9NPF0 282 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 OBP2BQ9NPH6 170 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 MID2Q9UJV3 735 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 PNMA2Q9UL42 364 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 SHOC2Q9UQ13 582 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 PCDHGB3Q9Y5G1 929 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 LRRFIP2Q9Y608 721 aaKnown RBP5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 A0A1B0GTL3 188 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 FAM234BA2RU67 622 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 AQP7P3A6NL99 342 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 LGALS16A8MUM7 142 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 ACKR2O00590 384 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 PRRG2O14669 202 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 SOAT2O75908 522 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 CNOT4O95628 575 aaKnown RBP5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 INHBBP09529 407 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 LINC00310P59036 64 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 MESP2Q0VG99 397 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 ARHGEF7Q14155 803 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 RAB30Q15771 203 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 CRB2Q5IJ48 1285 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 TCERG1LQ5VWI1 586 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 GAS2L3Q86XJ1 694 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 GALNT15Q8N3T1 639 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 SLC17A8Q8NDX2 589 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 TBC1D20Q96BZ9 403 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 ZSCAN31Q96LW9 406 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 SMOQ99835 787 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 CPEB1Q9BZB8 566 aaKnown RBP5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 IMPG2Q9BZV3 1241 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 ZCWPW1Q9H0M4 648 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 SPON1Q9HCB6 807 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 XPNPEP3Q9NQH7 507 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 TBC1D23Q9NUY8 699 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 FBXO34Q9NWN3 711 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 C9orf78Q9NZ63 289 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 RGL1Q9NZL6 768 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 POGKQ9P215 609 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 CA14Q9ULX7 337 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 GPR52Q9Y2T5 361 aa5.57□□□□□ -1.52
HMGB3P18-201ENST00000406327 PNPLA7Q6ZV29 1317 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 M0R3H8 397 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 MATN2O00339 956 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 GLP2RO95838 553 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 A1BGP04217 495 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 ATXN1LP0C7T5 689 aaKnown RBP5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 TPH1P17752 444 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 CPT1AP50416 773 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 ITGA8P53708 1063 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 PPP2CBP62714 309 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 PPP2CAP67775 309 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 ZNF844Q08AG5 666 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 GALNT1Q10472 559 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 CNGB1Q14028 1251 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 IQCB1Q15051 598 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 MAPRE1Q15691 268 aaKnown RBP5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 KCNA10Q16322 511 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 TAF12Q16514 161 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 FAM214AQ32MH5 1076 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 MGAT5BQ3V5L5 792 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 DCAF17Q5H9S7 520 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 JAKMIP3Q5VZ66 844 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 ANKS6Q68DC2 871 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 MZT2AQ6P582 158 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 TMED8Q6PL24 325 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 GPRIN1Q7Z2K8 1008 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 PPP1R32Q7Z5V6 425 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 FAM46DQ8NEK8 389 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 TMIEQ8NEW7 156 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 ST8SIA2Q92186 375 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 KLHL32Q96NJ5 620 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 DPYSL5Q9BPU6 564 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 GJB4Q9NTQ9 266 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 HESX1Q9UBX0 185 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 CAPN11Q9UMQ6 739 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 SLC45A2Q9UMX9 530 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 NEU2Q9Y3R4 380 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 UNC13AQ9UPW8 1703 aa5.56□□□□□ -1.52
HMGB3P18-201ENST00000406327 SMARCA2P51531 1590 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 PEG3Q9GZU2 1588 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 KCNQ3O43525 872 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 ITGB1P05556 798 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 ITGA5P08648 1049 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 EGR1P18146 543 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 BTF3P20290 206 aaKnown RBP5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 GABRB3P28472 473 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 LRPAP1P30533 357 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 KCNC1P48547 511 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 SLURP1P55000 103 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 TBX2Q13207 712 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 GRM7Q14831 915 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 MAPKAPK3Q16644 382 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 RRAGBQ5VZM2 374 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 MRNIPQ6NTE8 343 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 LAYNQ6UX15 382 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 XYLT1Q86Y38 959 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms