RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 HHIPL2Q6UWX4 724 aa13.93□□□□□ -0.18
SNED1-205ENST00000405547 AFG1LQ8WV93 481 aa13.93□□□□□ -0.18
SNED1-205ENST00000405547 APBB2Q92870 758 aa13.93□□□□□ -0.18
SNED1-205ENST00000405547 SLC10A4Q96EP9 437 aa13.93□□□□□ -0.18
SNED1-205ENST00000405547 NIF3L1Q9GZT8 377 aa13.93□□□□□ -0.18
SNED1-205ENST00000405547 ABCF3Q9NUQ8 709 aa13.93□□□□□ -0.18
SNED1-205ENST00000405547 STRNO43815 780 aa13.93□□□□□ -0.18
SNED1-205ENST00000405547 HMOX2P30519 316 aa13.93□□□□□ -0.18
SNED1-205ENST00000405547 RFC5P40937 340 aa13.93□□□□□ -0.18
SNED1-205ENST00000405547 SULT1E1P49888 294 aa13.93□□□□□ -0.18
SNED1-205ENST00000405547 PLD3Q8IV08 490 aa13.93□□□□□ -0.18
SNED1-205ENST00000405547 C1orf131Q8NDD1 294 aaKnown RBP13.93□□□□□ -0.18
SNED1-205ENST00000405547 LBHD1Q9BQE6 289 aaPredicted RBP13.93□□□□□ -0.18
SNED1-205ENST00000405547 CDC42EP4Q9H3Q1 356 aaKnown RBP13.93□□□□□ -0.18
SNED1-205ENST00000405547 PLEKHA5Q9HAU0 1116 aa13.93□□□□□ -0.18
SNED1-205ENST00000405547 GRB10Q13322 594 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 PDAP1Q13442 181 aaKnown RBP13.92□□□□□ -0.18
SNED1-205ENST00000405547 NTRK3Q16288 839 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 RNF219Q5W0B1 726 aaPredicted RBP13.92□□□□□ -0.18
SNED1-205ENST00000405547 SZRD1Q7Z422 152 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 MARCH10Q8NA82 808 aaPredicted RBP13.92□□□□□ -0.18
SNED1-205ENST00000405547 ARHGAP20Q9P2F6 1191 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 AGAP1Q9UPQ3 857 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 TRPC5OSA6NMA1 111 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 F8VZ95 297 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 PJA2O43164 708 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 ZC3H11AO75152 810 aaKnown RBP eCLIP13.92□□□□□ -0.18
SNED1-205ENST00000405547 SYCP2LQ5T4T6 812 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 BTBD8Q5XKL5 378 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 RDM1Q8NG50 284 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.92□□□□□ -0.18
SNED1-205ENST00000405547 TRIM49D1C9J1S8 452 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 PPP4CP60510 307 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 WLSQ5T9L3 541 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 EIF1ADQ8N9N8 165 aaKnown RBP13.92□□□□□ -0.18
SNED1-205ENST00000405547 FAM71DQ8N9W8 422 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 SH3TC2Q8TF17 1288 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 CRAMP1Q96RY5 1269 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 TEX13BQ9BXU2 312 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 SLC24A2Q9UI40 661 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 ZBTB12Q9Y330 459 aaPredicted RBP13.92□□□□□ -0.18
SNED1-205ENST00000405547 AP4S1Q9Y587 144 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 LBRQ14739 615 aaKnown RBP13.92□□□□□ -0.18
SNED1-205ENST00000405547 ARHGEF6Q15052 776 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 MROH9Q5TGP6 573 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 C11orf63Q6NUN7 778 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 TMEM143Q96AN5 459 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 SEMA6BQ9H3T3 888 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 WDR70Q9NW82 654 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 CEP170BQ9Y4F5 1589 aaPredicted RBP13.92□□□□□ -0.18
SNED1-205ENST00000405547 SLC37A4O43826 429 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 GPD1P21695 349 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 SMAD1Q15797 465 aaKnown RBP13.92□□□□□ -0.18
SNED1-205ENST00000405547 TRMT5Q32P41 509 aaKnown RBP13.92□□□□□ -0.18
SNED1-205ENST00000405547 BOLA3Q53S33 107 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 ATPAF2Q8N5M1 289 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 NRXN1Q9ULB1 1477 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 OLFML2BQ68BL8 750 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 NUP93Q8N1F7 819 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 FAM111AQ96PZ2 611 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 BEGAINQ9BUH8 593 aa13.92□□□□□ -0.18
SNED1-205ENST00000405547 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.92□□□□□ -0.18
SNED1-205ENST00000405547 MYH9P35579 1960 aaKnown RBP13.91□□□□□ -0.18
SNED1-205ENST00000405547 UBOX5O94941 541 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 CNTFP26441 200 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 FDFT1P37268 417 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 KBTBD12Q3ZCT8 623 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 GJB7Q6PEY0 223 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 LINC00523Q86TU6 105 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 EXD1Q8NHP7 514 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 URGCPQ8TCY9 931 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 PACSIN1Q9BY11 444 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 PATL1Q86TB9 770 aaKnown RBP13.91□□□□□ -0.18
SNED1-205ENST00000405547 CCNJLQ8IV13 435 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 OTUB1Q96FW1 271 aaPredicted RBP13.91□□□□□ -0.18
SNED1-205ENST00000405547 C10orf88Q9H8K7 445 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 DDX28Q9NUL7 540 aaKnown RBP13.91□□□□□ -0.18
SNED1-205ENST00000405547 NDFIP2Q9NV92 336 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 RSPH10B2B2RC85 870 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 RSPH10BP0C881 870 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 COG2Q14746 738 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 MMP19Q99542 508 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 SH2D3AQ9BRG2 576 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 TJP2Q9UDY2 1190 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 DIP2BQ9P265 1576 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 C6orf10Q5SRN2 563 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 APPL2Q8NEU8 664 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 TFB1MQ8WVM0 346 aaKnown RBP13.91□□□□□ -0.18
SNED1-205ENST00000405547 DIP2CQ9Y2E4 1556 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 MAGEB2O15479 319 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 CYP11B1P15538 503 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 TMED10P49755 219 aaKnown RBP13.91□□□□□ -0.18
SNED1-205ENST00000405547 CUL2Q13617 745 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 TBC1D16Q8TBP0 767 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 RMDN1Q96DB5 314 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 CNDP1Q96KN2 507 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 FAM118BQ9BPY3 351 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 FKBP6O75344 327 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 SPDYCQ5MJ68 293 aa13.91□□□□□ -0.18
SNED1-205ENST00000405547 EFL1Q7Z2Z2 1120 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms