RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 PARD3BQ8TEW8 1205 aa19.49■□□□□ 0.71
PTPRN2-204ENST00000404321 EEF2KMTQ96G04 330 aa19.49■□□□□ 0.71
PTPRN2-204ENST00000404321 KXD1Q9BQD3 176 aa19.49■□□□□ 0.71
PTPRN2-204ENST00000404321 PI4K2AQ9BTU6 479 aa19.49■□□□□ 0.71
PTPRN2-204ENST00000404321 FBXL21Q9UKT6 434 aa19.49■□□□□ 0.71
PTPRN2-204ENST00000404321 DUSP12Q9UNI6 340 aa19.49■□□□□ 0.71
PTPRN2-204ENST00000404321 FRMD4BQ9Y2L6 1034 aa19.49■□□□□ 0.71
PTPRN2-204ENST00000404321 PCDHA5Q9Y5H7 936 aa19.49■□□□□ 0.71
PTPRN2-204ENST00000404321 DOCK6Q96HP0 2047 aa19.49■□□□□ 0.71
PTPRN2-204ENST00000404321 INTS6LQ5JSJ4 861 aaKnown RBP19.48■□□□□ 0.71
PTPRN2-204ENST00000404321 TDRD10Q5VZ19 366 aaKnown RBP19.48■□□□□ 0.71
PTPRN2-204ENST00000404321 STKLD1Q8NE28 680 aa19.48■□□□□ 0.71
PTPRN2-204ENST00000404321 GIPC2Q8TF65 315 aa19.48■□□□□ 0.71
PTPRN2-204ENST00000404321 KBTBD7Q8WVZ9 684 aa19.48■□□□□ 0.71
PTPRN2-204ENST00000404321 SMARCE1Q969G3 411 aa19.48■□□□□ 0.71
PTPRN2-204ENST00000404321 ACBD6Q9BR61 282 aa19.48■□□□□ 0.71
PTPRN2-204ENST00000404321 AVENQ9NQS1 362 aaPredicted RBP19.48■□□□□ 0.71
PTPRN2-204ENST00000404321 RMND1Q9NWS8 449 aa19.48■□□□□ 0.71
PTPRN2-204ENST00000404321 CHMP5Q9NZZ3 219 aa19.48■□□□□ 0.71
PTPRN2-204ENST00000404321 NXF1Q9UBU9 619 aaKnown RBP19.48■□□□□ 0.71
PTPRN2-204ENST00000404321 GTF3C4Q9UKN8 822 aa19.48■□□□□ 0.71
PTPRN2-204ENST00000404321 HCN4Q9Y3Q4 1203 aa19.48■□□□□ 0.71
PTPRN2-204ENST00000404321 PCDHB5Q9Y5E4 795 aa19.48■□□□□ 0.71
PTPRN2-204ENST00000404321 ZNF197O14709 1029 aa19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 GABRDO14764 452 aa19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 ATP2C2O75185 946 aa19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 MOSPD3O75425 235 aa19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 AKAP3O75969 853 aa19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 SMC2O95347 1197 aa19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 PDGFRBP09619 1106 aa19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 HAPLN1P10915 354 aaPredicted RBP19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 ATF6P18850 670 aa19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 LMO2P25791 158 aa19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 LHX1P48742 406 aa19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 TUFMP49411 452 aaKnown RBP19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 GPR15P49685 360 aa19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 PSMC1P62191 440 aaKnown RBP19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 TNNC1P63316 161 aa19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 WDR72Q3MJ13 1102 aa19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 ISM2Q6H9L7 571 aa19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 BMP8AQ7Z5Y6 402 aa19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 DNAJB7Q7Z6W7 309 aaPredicted RBP19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 SUGP1Q8IWZ8 645 aaKnown RBP19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 FBXL6Q8N531 539 aa19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 SHKBP1Q8TBC3 707 aa19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 NXPE3Q969Y0 559 aa19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 ZSWIM3Q96MP5 696 aa19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 TIGD1Q96MW7 591 aa19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 MRPL45Q9BRJ2 306 aaKnown RBP19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 ZNF334Q9HCZ1 680 aaPredicted RBP19.47■□□□□ 0.71
PTPRN2-204ENST00000404321 A0A1W2PRU2 124 aa19.46■□□□□ 0.71
PTPRN2-204ENST00000404321 KINO60870 393 aaKnown RBP19.46■□□□□ 0.71
PTPRN2-204ENST00000404321 PRCPP42785 496 aa19.46■□□□□ 0.71
PTPRN2-204ENST00000404321 ADAM9Q13443 819 aa19.46■□□□□ 0.71
PTPRN2-204ENST00000404321 TEAD2Q15562 447 aa19.46■□□□□ 0.71
PTPRN2-204ENST00000404321 SDHAF4Q5VUM1 108 aa19.46■□□□□ 0.71
PTPRN2-204ENST00000404321 MTSS1LQ765P7 747 aa19.46■□□□□ 0.71
PTPRN2-204ENST00000404321 LIMS2Q7Z4I7 341 aa19.46■□□□□ 0.71
PTPRN2-204ENST00000404321 TMC8Q8IU68 726 aa19.46■□□□□ 0.71
PTPRN2-204ENST00000404321 SPPL2BQ8TCT7 592 aa19.46■□□□□ 0.71
PTPRN2-204ENST00000404321 C2orf15Q8WU43 125 aaKnown RBP19.46■□□□□ 0.71
PTPRN2-204ENST00000404321 TMEM174Q8WUU8 243 aa19.46■□□□□ 0.71
PTPRN2-204ENST00000404321 GSDMAQ96QA5 445 aa19.46■□□□□ 0.71
PTPRN2-204ENST00000404321 PKMYT1Q99640 499 aa19.46■□□□□ 0.71
PTPRN2-204ENST00000404321 LRRC3Q9BY71 257 aa19.46■□□□□ 0.71
PTPRN2-204ENST00000404321 XYLT2Q9H1B5 865 aa19.46■□□□□ 0.71
PTPRN2-204ENST00000404321 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.46■□□□□ 0.71
PTPRN2-204ENST00000404321 HOOK1Q9UJC3 728 aaKnown RBP19.46■□□□□ 0.71
PTPRN2-204ENST00000404321 MYO10Q9HD67 2058 aa19.46■□□□□ 0.71
PTPRN2-204ENST00000404321 MYBPHLA2RUH7 354 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 C4BPAP04003 597 aaKnown RBP19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 TRIM49P0CI25 452 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 TRIM49CP0CI26 452 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 CYP2F1P24903 491 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 PCSK1P29120 753 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 EPHA5P54756 1037 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 VCPP55072 806 aaKnown RBP19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 GPC5P78333 572 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 CLDN10P78369 228 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 SMARCB1Q12824 385 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 NCOA4Q13772 614 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 VEPH1Q14D04 833 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 ZCWPW2Q504Y3 356 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 FAM78AQ5JUQ0 283 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 C1orf220Q5T0J3 134 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 ZNF658Q5TYW1 1059 aaPredicted RBP19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 SCARA5Q6ZMJ2 495 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 DPH6Q7L8W6 267 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 FAM186BQ8IYM0 893 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 SIX5Q8N196 739 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 LEMD2Q8NC56 503 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 FLCNQ8NFG4 579 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 TMC2Q8TDI7 906 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 PSMG2Q969U7 264 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 SYAP1Q96A49 352 aaPredicted RBP19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 SYT15Q9BQS2 421 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 SNX25Q9H3E2 840 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 MFSD1Q9H3U5 465 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 SLITRK6Q9H5Y7 841 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 MMRN2Q9H8L6 949 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms