RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 SMIM23A6NLE4 172 aa18.91■□□□□ 0.62
CHTOP-205ENST00000403433 RGS16O15492 202 aaPredicted RBP18.91■□□□□ 0.62
CHTOP-205ENST00000403433 TJP3O95049 919 aa18.91■□□□□ 0.62
CHTOP-205ENST00000403433 P4HA1P13674 534 aa18.91■□□□□ 0.62
CHTOP-205ENST00000403433 ATF7P17544 494 aaPredicted RBP18.91■□□□□ 0.62
CHTOP-205ENST00000403433 ATICP31939 592 aa18.91■□□□□ 0.62
CHTOP-205ENST00000403433 ITGA8P53708 1063 aa18.91■□□□□ 0.62
CHTOP-205ENST00000403433 OGDHQ02218 1023 aa18.91■□□□□ 0.62
CHTOP-205ENST00000403433 C6orf118Q5T5N4 469 aa18.91■□□□□ 0.62
CHTOP-205ENST00000403433 RHBDF2Q6PJF5 856 aa18.91■□□□□ 0.62
CHTOP-205ENST00000403433 MTHFD1LQ6UB35 978 aa18.91■□□□□ 0.62
CHTOP-205ENST00000403433 NIPA2Q8N8Q9 360 aa18.91■□□□□ 0.62
CHTOP-205ENST00000403433 CCDC89Q8N998 374 aa18.91■□□□□ 0.62
CHTOP-205ENST00000403433 BBOF1Q8ND07 529 aa18.91■□□□□ 0.62
CHTOP-205ENST00000403433 TMEM109Q9BVC6 243 aa18.91■□□□□ 0.62
CHTOP-205ENST00000403433 TRAIPQ9BWF2 469 aa18.91■□□□□ 0.62
CHTOP-205ENST00000403433 SMYD3Q9H7B4 428 aa18.91■□□□□ 0.62
CHTOP-205ENST00000403433 DDX56Q9NY93 547 aaKnown RBP18.91■□□□□ 0.62
CHTOP-205ENST00000403433 BTBD19C9JJ37 291 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 F8VP50 259 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 PI4K2BG5E9Z4 385 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 TCF4P15884 667 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 ARF4P18085 180 aaPredicted RBP18.9■□□□□ 0.62
CHTOP-205ENST00000403433 VPS41P49754 854 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 RAD23BP54727 409 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 COPS2P61201 443 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 LMNB2Q03252 620 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 MKRN3Q13064 507 aaKnown RBP18.9■□□□□ 0.62
CHTOP-205ENST00000403433 TMEM132DQ14C87 1099 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 KAZNQ674X7 775 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 GSTA5Q7RTV2 222 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 ANKS1BQ7Z6G8 1248 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 PNMA8AQ86V59 439 aaPredicted RBP18.9■□□□□ 0.62
CHTOP-205ENST00000403433 FAM118BQ9BPY3 351 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 C16orf70Q9BSU1 422 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 KATNBL1Q9H079 304 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 STMN4Q9H169 189 aaPredicted RBP18.9■□□□□ 0.62
CHTOP-205ENST00000403433 SDCBP2Q9H190 292 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 MORF4L1Q9UBU8 362 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 ANAPC5Q9UJX4 755 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 GOLGA8SH3BPF8 625 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 H3BRB1 525 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 TP73O15350 636 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 IVDP26440 423 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 CDH8P55286 799 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 PTPN20Q4JDL3 420 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 ATP13A4Q4VNC1 1196 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 UHMK1Q8TAS1 419 aaKnown RBP18.9■□□□□ 0.62
CHTOP-205ENST00000403433 MS4A4AQ96JQ5 239 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 FAM107BQ9H098 131 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 CDC42EP4Q9H3Q1 356 aaKnown RBP18.9■□□□□ 0.62
CHTOP-205ENST00000403433 TUT1Q9H6E5 874 aaKnown RBP18.9■□□□□ 0.62
CHTOP-205ENST00000403433 SYNCQ9H7C4 482 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 CYP3A43Q9HB55 503 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 CLEC11AQ9Y240 323 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 NEU2Q9Y3R4 380 aa18.9■□□□□ 0.62
CHTOP-205ENST00000403433 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.89■□□□□ 0.61
CHTOP-205ENST00000403433 E7EVH7 732 aa18.89■□□□□ 0.61
CHTOP-205ENST00000403433 MEFVO15553 781 aaPredicted RBP18.89■□□□□ 0.61
CHTOP-205ENST00000403433 SNAI1O95863 264 aaPredicted RBP18.89■□□□□ 0.61
CHTOP-205ENST00000403433 KRT10P13645 584 aa18.89■□□□□ 0.61
CHTOP-205ENST00000403433 PSMA2P25787 234 aa18.89■□□□□ 0.61
CHTOP-205ENST00000403433 UBAP2Q5T6F2 1119 aaKnown RBP18.89■□□□□ 0.61
CHTOP-205ENST00000403433 SPOCD1Q6ZMY3 1216 aa18.89■□□□□ 0.61
CHTOP-205ENST00000403433 B4GALNT4Q76KP1 1039 aa18.89■□□□□ 0.61
CHTOP-205ENST00000403433 DPP9Q86TI2 863 aa18.89■□□□□ 0.61
CHTOP-205ENST00000403433 NLRP14Q86W24 1093 aa18.89■□□□□ 0.61
CHTOP-205ENST00000403433 ADPGKQ9BRR6 497 aa18.89■□□□□ 0.61
CHTOP-205ENST00000403433 VRTNQ9H8Y1 702 aa18.89■□□□□ 0.61
CHTOP-205ENST00000403433 AAASQ9NRG9 546 aa18.89■□□□□ 0.61
CHTOP-205ENST00000403433 RASGRF2O14827 1237 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 TSPAN1O60635 241 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 AGTP01019 485 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 PTPN7P35236 360 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 CHKAP35790 457 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 PSMC1P62191 440 aaKnown RBP18.88■□□□□ 0.61
CHTOP-205ENST00000403433 PTPN11Q06124 597 aaPredicted RBP18.88■□□□□ 0.61
CHTOP-205ENST00000403433 ORC1Q13415 861 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 GRIK4Q16099 956 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 SLC10A6Q3KNW5 377 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 MFSD7Q6UXD7 560 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 ANKRD23Q86SG2 305 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 SLC4A11Q8NBS3 891 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 MYCBPAPQ8TBZ2 947 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 CCHCR1Q8TD31 782 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 EPS8L3Q8TE67 593 aaKnown RBP18.88■□□□□ 0.61
CHTOP-205ENST00000403433 PPANQ9NQ55 473 aaKnown RBP18.88■□□□□ 0.61
CHTOP-205ENST00000403433 WDR35Q9P2L0 1181 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 LRRD1A4D1F6 860 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 SIGLEC16A6NMB1 481 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 MYO1CO00159 1063 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 LIASO43766 372 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 CILPO75339 1184 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 KRT3P12035 628 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 SEC24CP53992 1094 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 TFDP3Q5H9I0 405 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 IZUMO3Q5VZ72 239 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 GPR142Q7Z601 462 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 OR6J1Q8NGC5 347 aa18.88■□□□□ 0.61
CHTOP-205ENST00000403433 ZNF473Q8WTR7 871 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms