RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 INSL5Q9Y5Q6 135 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 F5P12259 2224 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 ARHGEF37A1IGU5 675 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 CYB561D2O14569 222 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 EIF3DO15371 548 aaKnown RBP eCLIP6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 SIAH2O43255 324 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 TGFB1I1O43294 461 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 HCRTO43612 131 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 SOAT2O75908 522 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 LDHAP00338 332 aaKnown RBP6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 ITGB3P05106 788 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 RHOP08100 348 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 KRT19P08727 400 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 CCNYL3P0C7X3 344 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 ODC1P11926 461 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 GJA1P17302 382 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 CEBPBP17676 345 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 NDUFV2P19404 249 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 TYMPP19971 482 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 CMA1P23946 247 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 CCR2P41597 374 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 TAF6P49848 677 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 TWF1Q12792 350 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 BFSP1Q12934 665 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 STK4Q13043 487 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 TDGQ13569 410 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 HTR4Q13639 388 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 BECN1Q14457 450 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 CCDC142Q17RM4 750 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 UVSSAQ2YD98 709 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 WSCD1Q658N2 575 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 TPGS2Q68CL5 300 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 DESI1Q6ICB0 168 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 PARM1Q6UWI2 310 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 TREML4Q6UXN2 200 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 BMP8AQ7Z5Y6 402 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 NPAS3Q8IXF0 933 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 UBALD2Q8IYN6 164 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 SLC44A3Q8N4M1 653 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 FBXL6Q8N531 539 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 CSGALNACT2Q8N6G5 542 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 ATAD1Q8NBU5 361 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 KIAA0895Q8NCT3 520 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 OR5B17Q8NGF7 314 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 HPS1Q92902 700 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 FGF13Q92913 245 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 FGF14Q92915 247 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 TCEAL4Q96EI5 215 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 MCRS1Q96EZ8 462 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 BORCS6Q96GS4 357 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 MFSD14AQ96MC6 490 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 TSPAN18Q96SJ8 248 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 KXD1Q9BQD3 176 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 RTP3Q9BQQ7 232 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 CORO1BQ9BR76 489 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 MTMR12Q9C0I1 747 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 ATP13A2Q9NQ11 1180 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 AGPAT3Q9NRZ7 376 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 EXOC1Q9NV70 894 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 CEP72Q9P209 647 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 EPS15L1Q9UBC2 864 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 AFF4Q9UHB7 1163 aaKnown RBP6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 SIX4Q9UIU6 781 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 CDH7Q9ULB5 785 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 AGAP1Q9UPQ3 857 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 HPSEQ9Y251 543 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 MRPS23Q9Y3D9 190 aaKnown RBP6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 YIPF1Q9Y548 306 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 NUMBLQ9Y6R0 609 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 KMT2EQ8IZD2 1858 aa6.22□□□□□ -1.41
HMGB1P20-201ENST00000402555 RIF1Q5UIP0 2472 aaKnown RBP6.21□□□□□ -1.41
HMGB1P20-201ENST00000402555 COL4A3Q01955 1670 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 PVALEFA0A1B0GWK0 134 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 MTMR11A4FU01 709 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 ZNF233A6NK53 670 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 OR6C75A6NL08 312 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 KPNA7A9QM74 516 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 ANHXE9PGG2 379 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 CYP11A1P05108 521 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 POU2F2P09086 479 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 TMEM191BP0C7N4 346 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 DLATP10515 647 aaKnown RBP6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 MYL4P12829 197 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 PTPN2P17706 415 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 SYKP43405 635 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 CASP4P49662 377 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 POU5F1Q01860 360 aaKnown RBP6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 DUSP4Q13115 394 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 GPR17Q13304 367 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 SNRNP35Q16560 246 aaKnown RBP6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 BMT2Q1RMZ1 405 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 SV2CQ496J9 727 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 SLC39A12Q504Y0 691 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 PRSS36Q5K4E3 855 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 CENPPQ6IPU0 288 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 KRBA2Q6ZNG9 492 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 HS2ST1Q7LGA3 356 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 LRRTM3Q86VH5 581 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 OSTM1Q86WC4 334 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms