RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 EPHB6O15197 1021 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ATP2C2O75185 946 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 EPCAMP16422 314 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CDK11BP21127 795 aaKnown RBP13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CLCN4P51793 760 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CDR1P51861 262 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 FANCCQ00597 558 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CUL2Q13617 745 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 RAB33AQ14088 237 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 WDR44Q5JSH3 913 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 RRAGAQ7L523 313 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 METTL23Q86XA0 190 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 NT5C1BQ96P26 610 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 EMILIN2Q9BXX0 1053 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 GANQ9H2C0 597 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CRISPLD1Q9H336 500 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 TLE6Q9H808 572 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CYP3A43Q9HB55 503 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CRTAC1Q9NQ79 661 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 STXBP5LQ9Y2K9 1186 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 HCFC2Q9Y5Z7 792 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PTPRDP23468 1912 aa13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 MTCL1Q9Y4B5 1905 aaKnown RBP13.27□□□□□ -0.29
HLA-DQB1-203ENST00000399082 MYBPHLA2RUH7 354 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 GOLGA6L19H0YKK7 550 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PES1O00541 588 aaKnown RBP13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 TGM5O43548 720 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CILPO75339 1184 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 NOL4O94818 638 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ABLIM3O94929 683 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ADH1AP07327 375 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PDGFRBP09619 1106 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 P4HA1P13674 534 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CD58P19256 250 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 KLRC2P26717 231 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 LHX1P48742 406 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 NDST1P52848 882 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PSMC1P62191 440 aaKnown RBP13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 GCNT1Q02742 428 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CREMQ03060 361 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CETN1Q12798 172 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ORC1Q13415 861 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 SYCP1Q15431 976 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CTC1Q2NKJ3 1217 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 INTS6LQ5JSJ4 861 aaKnown RBP13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 RNF19BQ6ZMZ0 732 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PALB2Q86YC2 1186 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 MICALL1Q8N3F8 863 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PPM1KQ8N3J5 372 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 TTC9BQ8N6N2 239 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 EFHBQ8N7U6 833 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ANKRD20A12PQ8NF67 263 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 OR6B3Q8NGW1 331 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 DCBLD2Q96PD2 775 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ERGIC2Q96RQ1 377 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CDCA3Q99618 268 aaPredicted RBP13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 SYT15Q9BQS2 421 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ACBD6Q9BR61 282 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 LSM14BQ9BX40 385 aaKnown RBP13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ELOVL4Q9GZR5 314 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CISHQ9NSE2 258 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 BRWD1Q9NSI6 2320 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 APEX2Q9UBZ4 518 aa13.26□□□□□ -0.29
HLA-DQB1-203ENST00000399082 MTMR11A4FU01 709 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 A8MXQ7 604 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CLSTN1O94985 981 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 SEC24AO95486 1093 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 SPATA31D3P0C874 917 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 GNL1P36915 607 aaPredicted RBP13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 LTBRP36941 435 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PBX1P40424 430 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ARPP19P56211 112 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 DLX2Q07687 328 aaPredicted RBP13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 GPR17Q13304 367 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 ADAM15Q13444 863 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 BMS1Q14692 1282 aaKnown RBP13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 NR1I3Q14994 352 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CCDC85BQ15834 202 aaPredicted RBP13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 SLC39A12Q504Y0 691 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 KLHDC7AQ5VTJ3 777 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 IQCEQ6IPM2 695 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 LLGL2Q6P1M3 1020 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 FAM171BQ6P995 826 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 SPATA31D4Q6ZUB0 917 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CCDC150Q8NCX0 1101 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 NAA15Q9BXJ9 866 aaKnown RBP13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 OXCT2Q9BYC2 517 aaPredicted RBP13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 GPR88Q9GZN0 384 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 SNX25Q9H3E2 840 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 IGFLR1Q9H665 355 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PLCB1Q9NQ66 1216 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 FBXW11Q9UKB1 542 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 GTF3C4Q9UKN8 822 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CDH9Q9ULB4 789 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 BARX2Q9UMQ3 279 aaPredicted RBP13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 FHOD1Q9Y613 1164 aa13.25□□□□□ -0.29
HLA-DQB1-203ENST00000399082 RNF225M0QZC1 329 aaPredicted RBP13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 TBX10O75333 385 aa13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 GLUD1P00367 558 aa13.24□□□□□ -0.29
HLA-DQB1-203ENST00000399082 SERPINC1P01008 464 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms