RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 ADAM17P78536 824 aa27.27■■□□□ 1.96
SHARPIN-202ENST00000398712 INCA1Q0VD86 236 aa27.27■■□□□ 1.96
SHARPIN-202ENST00000398712 LRRC38Q5VT99 294 aa27.27■■□□□ 1.96
SHARPIN-202ENST00000398712 TMC3Q7Z5M5 1100 aa27.27■■□□□ 1.96
SHARPIN-202ENST00000398712 SAPCD2Q86UD0 394 aa27.27■■□□□ 1.96
SHARPIN-202ENST00000398712 TMEM130Q8N3G9 435 aa27.27■■□□□ 1.96
SHARPIN-202ENST00000398712 FAM76AQ8TAV0 307 aa27.27■■□□□ 1.96
SHARPIN-202ENST00000398712 ZDHHC18Q9NUE0 388 aa27.27■■□□□ 1.96
SHARPIN-202ENST00000398712 WDR35Q9P2L0 1181 aa27.27■■□□□ 1.96
SHARPIN-202ENST00000398712 BARX2Q9UMQ3 279 aaPredicted RBP27.27■■□□□ 1.96
SHARPIN-202ENST00000398712 PLAAQ9Y263 795 aa27.27■■□□□ 1.96
SHARPIN-202ENST00000398712 SNX24Q9Y343 169 aa27.27■■□□□ 1.96
SHARPIN-202ENST00000398712 SLC10A3P09131 477 aa27.26■■□□□ 1.95
SHARPIN-202ENST00000398712 SPDYCQ5MJ68 293 aa27.26■■□□□ 1.95
SHARPIN-202ENST00000398712 DAB2IPQ5VWQ8 1189 aa27.26■■□□□ 1.95
SHARPIN-202ENST00000398712 NIPA2Q8N8Q9 360 aa27.26■■□□□ 1.95
SHARPIN-202ENST00000398712 SNX27Q96L92 541 aa27.26■■□□□ 1.95
SHARPIN-202ENST00000398712 FAM129AQ9BZQ8 928 aa27.26■■□□□ 1.95
SHARPIN-202ENST00000398712 CDHR5Q9HBB8 845 aa27.26■■□□□ 1.95
SHARPIN-202ENST00000398712 SNTG2Q9NY99 539 aa27.26■■□□□ 1.95
SHARPIN-202ENST00000398712 GSCP56915 257 aaPredicted RBP27.25■■□□□ 1.95
SHARPIN-202ENST00000398712 PTPN20Q4JDL3 420 aa27.25■■□□□ 1.95
SHARPIN-202ENST00000398712 CYP4A22Q5TCH4 519 aa27.25■■□□□ 1.95
SHARPIN-202ENST00000398712 GRK7Q8WTQ7 553 aa27.25■■□□□ 1.95
SHARPIN-202ENST00000398712 RBM41Q96IZ5 413 aaKnown RBP27.25■■□□□ 1.95
SHARPIN-202ENST00000398712 TWNKQ96RR1 684 aa27.25■■□□□ 1.95
SHARPIN-202ENST00000398712 HMGXB4Q9UGU5 601 aa27.25■■□□□ 1.95
SHARPIN-202ENST00000398712 FEZ2Q9UHY8 353 aaPredicted RBP27.25■■□□□ 1.95
SHARPIN-202ENST00000398712 GJD2Q9UKL4 321 aa27.25■■□□□ 1.95
SHARPIN-202ENST00000398712 KIAA1257Q9ULG3 409 aa27.25■■□□□ 1.95
SHARPIN-202ENST00000398712 TNPO2O14787 897 aaKnown RBP27.25■■□□□ 1.95
SHARPIN-202ENST00000398712 HMGCRP04035 888 aa27.25■■□□□ 1.95
SHARPIN-202ENST00000398712 FLT3P36888 993 aa27.25■■□□□ 1.95
SHARPIN-202ENST00000398712 LMAN1P49257 510 aa27.25■■□□□ 1.95
SHARPIN-202ENST00000398712 SYDE1Q6ZW31 735 aaPredicted RBP27.25■■□□□ 1.95
SHARPIN-202ENST00000398712 RCOR2Q8IZ40 523 aa27.25■■□□□ 1.95
SHARPIN-202ENST00000398712 C1orf54Q8WWF1 131 aa27.25■■□□□ 1.95
SHARPIN-202ENST00000398712 DNAJB3Q8WWF6 145 aa27.25■■□□□ 1.95
SHARPIN-202ENST00000398712 TRIM6Q9C030 488 aaPredicted RBP27.25■■□□□ 1.95
SHARPIN-202ENST00000398712 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.25■■□□□ 1.95
SHARPIN-202ENST00000398712 RALAP11233 206 aa27.24■■□□□ 1.95
SHARPIN-202ENST00000398712 GJC1P36383 396 aa27.24■■□□□ 1.95
SHARPIN-202ENST00000398712 DHX9Q08211 1270 aaKnown RBP27.24■■□□□ 1.95
SHARPIN-202ENST00000398712 ZNF252P-AS1Q0IIN9 211 aa27.24■■□□□ 1.95
SHARPIN-202ENST00000398712 CNGA2Q16280 664 aa27.24■■□□□ 1.95
SHARPIN-202ENST00000398712 BEST2Q8NFU1 509 aa27.24■■□□□ 1.95
SHARPIN-202ENST00000398712 UBLCP1Q8WVY7 318 aaPredicted RBP27.24■■□□□ 1.95
SHARPIN-202ENST00000398712 HEXIM2Q96MH2 286 aaKnown RBP27.24■■□□□ 1.95
SHARPIN-202ENST00000398712 EIF2AQ9BY44 585 aaKnown RBP27.24■■□□□ 1.95
SHARPIN-202ENST00000398712 OSBPL8Q9BZF1 889 aa27.24■■□□□ 1.95
SHARPIN-202ENST00000398712 GPBP1L1Q9HC44 474 aaPredicted RBP27.24■■□□□ 1.95
SHARPIN-202ENST00000398712 GRHL1Q9NZI5 618 aa27.24■■□□□ 1.95
SHARPIN-202ENST00000398712 PTPN22Q9Y2R2 807 aa27.24■■□□□ 1.95
SHARPIN-202ENST00000398712 SIGLEC16A6NMB1 481 aa27.23■■□□□ 1.95
SHARPIN-202ENST00000398712 O00370 1275 aa27.23■■□□□ 1.95
SHARPIN-202ENST00000398712 PPFIA2O75334 1257 aa27.23■■□□□ 1.95
SHARPIN-202ENST00000398712 MICAL2O94851 1124 aa27.23■■□□□ 1.95
SHARPIN-202ENST00000398712 IGHA2P01877 340 aa27.23■■□□□ 1.95
SHARPIN-202ENST00000398712 GNAT1P11488 350 aa27.23■■□□□ 1.95
SHARPIN-202ENST00000398712 RPL21P46778 160 aaKnown RBP27.23■■□□□ 1.95
SHARPIN-202ENST00000398712 KLF1Q13351 362 aaPredicted RBP27.23■■□□□ 1.95
SHARPIN-202ENST00000398712 ORC1Q13415 861 aa27.23■■□□□ 1.95
SHARPIN-202ENST00000398712 PPP1R7Q15435 360 aa27.23■■□□□ 1.95
SHARPIN-202ENST00000398712 UAP1Q16222 522 aaPredicted RBP27.23■■□□□ 1.95
SHARPIN-202ENST00000398712 DCLK3Q9C098 648 aa27.23■■□□□ 1.95
SHARPIN-202ENST00000398712 SYNCQ9H7C4 482 aa27.23■■□□□ 1.95
SHARPIN-202ENST00000398712 MTRF1LQ9UGC7 380 aaKnown RBP27.23■■□□□ 1.95
SHARPIN-202ENST00000398712 TRIP11Q15643 1979 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 C17orf102A2RUQ5 167 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 KRT14P02533 472 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 KCNJ1P48048 391 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 PLTPP55058 493 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 PSMC1P62191 440 aaKnown RBP27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 BEX3Q00994 111 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 SREBF2Q12772 1141 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 ZNF268Q14587 947 aaPredicted RBP27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 LLGL1Q15334 1064 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 FSCN1Q16658 493 aaKnown RBP27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 TTMPQ5BVD1 217 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 ZDHHC24Q6UX98 284 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 PPP1R13LQ8WUF5 828 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 DDX56Q9NY93 547 aaKnown RBP27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 CYTH4Q9UIA0 394 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 GOLGA6L10A6NI86 522 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 M0QYV0 167 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 KRT3P12035 628 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 NDST1P52848 882 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 IRX5P78411 483 aaPredicted RBP27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 HIC1Q14526 733 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 SNX17Q15036 470 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 KCTD19Q17RG1 926 aaPredicted RBP27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 NME8Q8N427 588 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 FNIP1Q8TF40 1166 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 ARL8AQ96BM9 186 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 PKNOX2Q96KN3 472 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 NT5C1AQ9BXI3 368 aa27.22■■□□□ 1.95
SHARPIN-202ENST00000398712 F8VP50 259 aa27.21■■□□□ 1.95
SHARPIN-202ENST00000398712 GOLGA8SH3BPF8 625 aa27.21■■□□□ 1.95
SHARPIN-202ENST00000398712 TREHO43280 583 aa27.21■■□□□ 1.95
SHARPIN-202ENST00000398712 AKR1A1P14550 325 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms