RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ARFIP2P53365 341 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 CSE1LP55060 971 aaKnown RBP14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 CDH18Q13634 790 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 CD99L2Q8TCZ2 262 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 CA12O43570 354 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 HIST1H2AGP0C0S8 130 aaPredicted RBP14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 HIST1H2ADP20671 130 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 SOX11P35716 441 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 PSEN2P49810 448 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 APLP1P51693 650 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 PKN3Q6P5Z2 889 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 FRMD5Q7Z6J6 570 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 CHSY1Q86X52 802 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 GUF1Q8N442 669 aaKnown RBP14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 ERLEC1Q96DZ1 483 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 ELMO2Q96JJ3 720 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 HIST1H2AHQ96KK5 128 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 FAM161BQ96MY7 647 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 MED15Q96RN5 788 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 DNAJC7Q99615 494 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 HIST1H2AJQ99878 128 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 REEP2Q9BRK0 252 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 H2AFJQ9BTM1 129 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 H3BRB1 525 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 PNMA6AP0CW24 399 aaPredicted RBP14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 TGFB3P10600 412 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 CCDC85BQ15834 202 aaPredicted RBP14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 PDXDC1Q6P996 788 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 ST13P4Q8IZP2 240 aaPredicted RBP14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 ZFYVE19Q96K21 471 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 TUT1Q9H6E5 874 aaKnown RBP14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 ZFATQ9P243 1243 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 RTN2O75298 545 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 PDGFRAP16234 1089 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 TAP1Q03518 808 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 DEUP1Q05D60 604 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 DMTNQ08495 405 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 NAA30Q147X3 362 aaPredicted RBP14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 NECAB2Q7Z6G3 386 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 MAGEB10Q96LZ2 347 aaPredicted RBP14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 TINF2Q9BSI4 451 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 HMOX2P30519 316 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 PGM5Q15124 567 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 SENP2Q9HC62 589 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 VTNP04004 478 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 APRTP07741 180 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 WEE2P0C1S8 567 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 PRKCQQ04759 706 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 NR1H3Q13133 447 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 GRIK4Q16099 956 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 SLITRK1Q96PX8 696 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 EIF2AQ9BY44 585 aaKnown RBP14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 KDM4CQ9H3R0 1056 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 SNX5Q9Y5X3 404 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 IGSF9BQ9UPX0 1349 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 MBL2P11226 248 aaPredicted RBP14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 PRKAR2AP13861 404 aaKnown RBP14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 SETD4Q9NVD3 440 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 AMACRQ9UHK6 382 aa14.9□□□□□ -0.02
PCDHA11-201ENST00000398640 MSH4O15457 936 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 KLRC1P26715 233 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 HIF1AQ16665 826 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 MMS22LQ6ZRQ5 1243 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 SNX31Q8N9S9 440 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 RFFLQ8WZ73 363 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 KIFC3Q9BVG8 833 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 EML4Q9HC35 981 aaKnown RBP14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 STX18Q9P2W9 335 aaKnown RBP14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 TCRBV5S4A2TA0A5A2 114 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 TBKBP1A7MCY6 615 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 ODC1P11926 461 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 LRRC74AQ0VAA2 488 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 CUL3Q13618 768 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 ZC2HC1CQ53FD0 456 aaPredicted RBP14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 DCAF6Q58WW2 860 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 TMEM117Q9H0C3 514 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 LATS2Q9NRM7 1088 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 SELENONQ9NZV5 590 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 SLC30A1Q9Y6M5 507 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 C3orf70A6NLC5 250 aaPredicted RBP14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 ARIH2O95376 493 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 NCAM1P13591 858 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 EPB42P16452 691 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 PCSK1P29120 753 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 ADCYAP1R1P41586 468 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 ALDH18A1P54886 795 aaKnown RBP14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 SEZ6Q53EL9 994 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 SLC30A10Q6XR72 485 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 DEFB118Q96PH6 123 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 PDCD2LQ9BRP1 358 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 FBXL21Q9UKT6 434 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 PCDHAC2Q9Y5I4 1007 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 MROH7Q68CQ1 1323 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 ONECUT3O60422 494 aaPredicted RBP14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 KLK7P49862 253 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 CLCN3P51790 818 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 TMEM132BQ14DG7 1078 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 MTBPQ96DY7 904 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms