RNA–Protein interactions for RNA: ENST00000398073.6

CTDSP2-201, Transcript of CTD small phosphatase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP2, Length 4,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-201ENST00000398073 MAGEB5Q9BZ81 275 aa17.14■□□□□ 0.33
CTDSP2-201ENST00000398073 AFF2P51816 1311 aa17.14■□□□□ 0.33
CTDSP2-201ENST00000398073 ATP9BO43861 1147 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 SLITRK3O94933 977 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 CPA2P48052 419 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 BOLA3Q53S33 107 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 IQCKQ8N0W5 287 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 SLC5A5Q92911 643 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 TNIP3Q96KP6 325 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 ZNF560Q96MR9 790 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 DCLK3Q9C098 648 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 CYP24A1Q07973 514 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 NME3Q13232 169 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 CYP4A22Q5TCH4 519 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 APOBEC3FQ8IUX4 373 aaKnown RBP17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 C4orf19Q8IY42 314 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 GIPC2Q8TF65 315 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 ACSF2Q96CM8 615 aaPredicted RBP17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 ZNF518BQ9C0D4 1074 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 MRPL46Q9H2W6 279 aaKnown RBP17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 LRRC4BQ9NT99 713 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 MAP3K20Q9NYL2 800 aaKnown RBP17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 PNMA3Q9UL41 463 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 AP3B1O00203 1094 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 OTOP1Q7RTM1 612 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 CYP2W1Q8TAV3 490 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 XAB2Q9HCS7 855 aaKnown RBP17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 METTL5Q9NRN9 209 aaKnown RBP17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 DLG5Q8TDM6 1919 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 PIK3CDO00329 1044 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 SLC4A1P02730 911 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 YWHAHQ04917 246 aaPredicted RBP17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 HAS1Q92839 578 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 NAF1Q96HR8 494 aaKnown RBP17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 POP1Q99575 1024 aaKnown RBP17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 ZNRF3Q9ULT6 936 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 SHOC2Q9UQ13 582 aa17.13■□□□□ 0.33
CTDSP2-201ENST00000398073 SPRP35270 261 aaPredicted RBP17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 MCOLN2Q8IZK6 566 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 PAFAH2Q99487 392 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 NT5C1AQ9BXI3 368 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 TMX2Q9Y320 296 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 SNX9Q9Y5X1 595 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 PTPN4P29074 926 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 CHRNA5P30532 468 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 KIF22Q14807 665 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 TMEM132DQ14C87 1099 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 IER5Q5VY09 327 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 MMTAG2Q9BU76 263 aaKnown RBP17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 LCP1P13796 627 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 DRG2P55039 364 aaKnown RBP17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 ERMARDQ5T6L9 678 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 SPOCD1Q6ZMY3 1216 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 ARHGEF19Q8IW93 802 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 PDP2Q9P2J9 529 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 CDY2AQ9Y6F7 541 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 CDY1Q9Y6F8 540 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 DDTLA6NHG4 134 aaPredicted RBP17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 TTC36A6NLP5 189 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 MGEA5O60502 916 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 EEF1DP29692 281 aaKnown RBP17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 OTUD4Q01804 1114 aaKnown RBP17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 UGP2Q16851 508 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 SCFD2Q8WU76 684 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 VPS33BQ9H267 617 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 KCNMB3Q9NPA1 279 aa17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.12■□□□□ 0.33
CTDSP2-201ENST00000398073 C19orf81C9J6K1 198 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 RARRES1P49788 294 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 KPNB1Q14974 876 aaKnown RBP17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 CBWD6Q4V339 395 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 CBWD3Q5JTY5 395 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 CBWD5Q5RIA9 395 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 MROH9Q5TGP6 573 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 SKA2Q8WVK7 121 aaPredicted RBP17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 KRT35Q92764 455 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 PCDH9Q9HC56 1237 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 TM9SF1O15321 606 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 GRAP2O75791 330 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 CALB2P22676 271 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 CASP5P51878 434 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 C1QBPQ07021 282 aaKnown RBP17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 ATF7IP2Q5U623 682 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 SAMD3Q8N6K7 520 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 DNAJC18Q9H819 358 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 RICTORQ6R327 1708 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 MAGEA13PA6NCF6 341 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 GCNT1Q02742 428 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 TMCO4Q5TGY1 634 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 ZNF280CQ8ND82 737 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 CXorf38Q8TB03 319 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 DTNBP1Q96EV8 351 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 SLC4A9Q96Q91 983 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 AVENQ9NQS1 362 aaPredicted RBP17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 NINJ2Q9NZG7 142 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 KNDC1Q76NI1 1749 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 PCNX4Q63HM2 1172 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 C16orf89Q6UX73 402 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 MTDHQ86UE4 582 aaKnown RBP17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 LCA5Q86VQ0 697 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms