RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 GJA10Q969M2 543 aa4.12□□□□□ -1.75
UBE3A-202ENST00000397954 TMX3Q96JJ7 454 aa4.12□□□□□ -1.75
UBE3A-202ENST00000397954 ADPGKQ9BRR6 497 aa4.12□□□□□ -1.75
UBE3A-202ENST00000397954 NAA15Q9BXJ9 866 aaKnown RBP4.12□□□□□ -1.75
UBE3A-202ENST00000397954 NSUN3Q9H649 340 aaKnown RBP4.12□□□□□ -1.75
UBE3A-202ENST00000397954 PRDM5Q9NQX1 630 aaPredicted RBP4.12□□□□□ -1.75
UBE3A-202ENST00000397954 DNM3Q9UQ16 869 aa4.12□□□□□ -1.75
UBE3A-202ENST00000397954 PCDHB7Q9Y5E2 793 aa4.12□□□□□ -1.75
UBE3A-202ENST00000397954 SRPRBQ9Y5M8 271 aaKnown RBP4.12□□□□□ -1.75
UBE3A-202ENST00000397954 UMODL1Q5DID0 1318 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 A0A1B0GTH6 734 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 TCRBV16S1A1N1A0A5B0 115 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 TNFRSF10CO14798 259 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 CUTAO60888 179 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 RNASEH2AO75792 299 aaKnown RBP4.11□□□□□ -1.75
UBE3A-202ENST00000397954 CCND1P24385 295 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 MAN1A1P33908 653 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 SOX18P35713 384 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 SUMO1P63165 101 aaKnown RBP4.11□□□□□ -1.75
UBE3A-202ENST00000397954 COASYQ13057 564 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 EMC2Q15006 297 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 E2F5Q15329 346 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 SHHQ15465 462 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 INAVAQ3KP66 663 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 ALFQ53S48 1182 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 FAM47CQ5HY64 1035 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 JAKMIP3Q5VZ66 844 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 HEATR6Q6AI08 1181 aaKnown RBP4.11□□□□□ -1.75
UBE3A-202ENST00000397954 LVRNQ6Q4G3 990 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 TOGARAM2Q6ZUX3 1019 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 ZNF365Q70YC5 407 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 CHST3Q7LGC8 479 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 USP37Q86T82 979 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 ZNF598Q86UK7 904 aaKnown RBP4.11□□□□□ -1.75
UBE3A-202ENST00000397954 C12orf56Q8IXR9 622 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 TMEM192Q8IY95 271 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 KIAA0319LQ8IZA0 1049 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 C4orf32Q8N8J7 132 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 GPBAR1Q8TDU6 330 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 TBC1D5Q92609 795 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 HAS1Q92839 578 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 CASP10Q92851 521 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 CCDC47Q96A33 483 aaKnown RBP4.11□□□□□ -1.75
UBE3A-202ENST00000397954 SLC6A18Q96N87 628 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 LXNQ9BS40 222 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 MYL10Q9BUA6 226 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 UPF3BQ9BZI7 483 aaKnown RBP4.11□□□□□ -1.75
UBE3A-202ENST00000397954 SMOC1Q9H4F8 434 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 TMEM206Q9H813 350 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 SLC28A3Q9HAS3 691 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 OLFML3Q9NRN5 406 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 TOPORSQ9NS56 1045 aaPredicted RBP4.11□□□□□ -1.75
UBE3A-202ENST00000397954 COMMD8Q9NX08 183 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 RTEL1Q9NZ71 1219 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 HOOK1Q9UJC3 728 aaKnown RBP4.11□□□□□ -1.75
UBE3A-202ENST00000397954 SAMM50Q9Y512 469 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 RBAK-RBAKDNI3L0D1 243 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 IL18RAPO95256 599 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 SOD2P04179 222 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 KLRC1P26715 233 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 CDC25AP30304 524 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 GRIK1P39086 918 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 RARRES1P49788 294 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 NCKAP1LP55160 1127 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 PLAURQ03405 335 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 ADCY1Q08828 1119 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 SMC1AQ14683 1233 aaKnown RBP4.11□□□□□ -1.75
UBE3A-202ENST00000397954 LONRF1Q17RB8 773 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 SWSAP1Q6NVH7 229 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 SLC27A1Q6PCB7 646 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 RSPO2Q6UXX9 243 aaPredicted RBP4.11□□□□□ -1.75
UBE3A-202ENST00000397954 PIK3AP1Q6ZUJ8 805 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 DDX53Q86TM3 631 aaKnown RBP4.11□□□□□ -1.75
UBE3A-202ENST00000397954 POF1BQ8WVV4 589 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 TAF4BQ92750 862 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 BHMTQ93088 406 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 PHKBQ93100 1093 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 PABPC5Q96DU9 382 aaKnown RBP4.11□□□□□ -1.75
UBE3A-202ENST00000397954 FAM81BQ96LP2 452 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 CENPOQ9BU64 300 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 PBX4Q9BYU1 374 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 IRX2Q9BZI1 471 aaPredicted RBP4.11□□□□□ -1.75
UBE3A-202ENST00000397954 SCAND2PQ9GZW5 306 aaPredicted RBP4.11□□□□□ -1.75
UBE3A-202ENST00000397954 CSRNP2Q9H175 543 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 TRPV6Q9H1D0 765 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 FZD8Q9H461 694 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 TTC12Q9H892 705 aaPredicted RBP4.11□□□□□ -1.75
UBE3A-202ENST00000397954 LARSQ9P2J5 1176 aaKnown RBP4.11□□□□□ -1.75
UBE3A-202ENST00000397954 DSEQ9UL01 958 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 GTF2A1LQ9UNN4 478 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 TNFSF13BQ9Y275 285 aa4.11□□□□□ -1.75
UBE3A-202ENST00000397954 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.1□□□□□ -1.75
UBE3A-202ENST00000397954 PVALEFA0A1B0GWK0 134 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 A0A1W2PQ27 194 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 A0A1W2PQ64 194 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 A0A1W2PQD8 194 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 hCG_1642624A0A1W2PR95 340 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 ANO9A1A5B4 782 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 FRMD3A2A2Y4 597 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 ARHGEF35A5YM69 484 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms