RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 NMD3Q96D46 503 aaKnown RBP5.73□□□□□ -1.49
PTPRD-205ENST00000397611 ARHGEF26Q96DR7 871 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 OSBPL8Q9BZF1 889 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 PCDHA10Q9Y5I2 948 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 ADGRA3Q8IWK6 1321 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 PTGER2P43116 358 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 MRPS9P82933 396 aaKnown RBP5.73□□□□□ -1.49
PTPRD-205ENST00000397611 TSPY1Q01534 308 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 TKFCQ3LXA3 575 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 PCNX4Q63HM2 1172 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 VSTM1Q6UX27 236 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 NLRX1Q86UT6 975 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 CHSY1Q86X52 802 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 PIGOQ8TEQ8 1089 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 KRT35Q92764 455 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 GMLQ99445 158 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 KIAA1683Q9H0B3 1180 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 NPHS2Q9NP85 383 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 MKS1Q9NXB0 559 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-205ENST00000397611 COPB2P35606 906 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 SLC16A2P36021 539 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 RFC5P40937 340 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 SNRNP35Q16560 246 aaKnown RBP5.72□□□□□ -1.49
PTPRD-205ENST00000397611 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-205ENST00000397611 MYLK4Q86YV6 388 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-205ENST00000397611 RFX6Q8HWS3 928 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 TMEM35BQ8NCS4 154 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 GPR88Q9GZN0 384 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 DRC3Q9H069 523 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 RGL1Q9NZL6 768 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 HAO1Q9UJM8 370 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 E7ESA3 106 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 GOLGA8SH3BPF8 625 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 GOLGA8MH3BSY2 632 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 UBOX5O94941 541 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 ASMTLO95671 621 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 ACADSP16219 412 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 ALDH18A1P54886 795 aaKnown RBP5.72□□□□□ -1.49
PTPRD-205ENST00000397611 BASP1P80723 227 aaKnown RBP5.72□□□□□ -1.49
PTPRD-205ENST00000397611 TRADDQ15628 312 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 XKR3Q5GH77 459 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 TTC27Q6P3X3 843 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 PCGF5Q86SE9 256 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 ADGRG6Q86SQ4 1221 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 MCOLN2Q8IZK6 566 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 AGBL3Q8NEM8 1001 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 STON2Q8WXE9 905 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 SCYL1Q96KG9 808 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 PDCD2LQ9BRP1 358 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 SIKE1Q9BRV8 207 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 K7ENM7 598 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 CCDC22O60826 627 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 EDF1O60869 148 aaKnown RBP5.72□□□□□ -1.49
PTPRD-205ENST00000397611 CALB2P22676 271 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 MMP8P22894 467 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 STIP1P31948 543 aaKnown RBP5.72□□□□□ -1.49
PTPRD-205ENST00000397611 CPA2P48052 419 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 KLHL38Q2WGJ6 581 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 JADE1Q6IE81 842 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 BZW1Q7L1Q6 419 aaKnown RBP5.72□□□□□ -1.49
PTPRD-205ENST00000397611 LDHDQ86WU2 507 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 SLC35B2Q8TB61 432 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 EPS8L3Q8TE67 593 aaKnown RBP5.72□□□□□ -1.49
PTPRD-205ENST00000397611 AAASQ9NRG9 546 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 DDX56Q9NY93 547 aaKnown RBP5.72□□□□□ -1.49
PTPRD-205ENST00000397611 COG5Q9UP83 839 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 SSX2IPQ9Y2D8 614 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 FIS1Q9Y3D6 152 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 NRAPQ86VF7 1730 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 ASTN2O75129 1339 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-205ENST00000397611 DDTLA6NHG4 134 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-205ENST00000397611 ZNF487B1APH4 448 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 GH2P01242 217 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 EIF4BP23588 611 aaKnown RBP5.72□□□□□ -1.49
PTPRD-205ENST00000397611 PDE1BQ01064 536 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 RCN1Q15293 331 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 SGSM1Q2NKQ1 1148 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 ACCSLQ4AC99 568 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 C1orf220Q5T0J3 134 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 ZNF772Q68DY9 489 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-205ENST00000397611 KCTD1Q719H9 257 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 ANO5Q75V66 913 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 VSIG10LQ86VR7 867 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 SESTD1Q86VW0 696 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 NUDCD3Q8IVD9 361 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 AFG1LQ8WV93 481 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 C1orf54Q8WWF1 131 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 TBCBQ99426 244 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 MPHOSPH6Q99547 160 aaKnown RBP5.72□□□□□ -1.49
PTPRD-205ENST00000397611 TRPV6Q9H1D0 765 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 GOLPH3Q9H4A6 298 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 SPC25Q9HBM1 224 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 MRGBPQ9NV56 204 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 F8W8V4 182 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 MCF2LO15068 1137 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 GSTA2P09210 222 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 USH1GQ495M9 461 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 TMEM259Q4ZIN3 620 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 DAB2IPQ5VWQ8 1189 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms