RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 KCNG1Q9UIX4 513 aa16.24■□□□□ 0.19
SEC13-206ENST00000397102 SFI1A8K8P3 1242 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 DCLK1O15075 740 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 APBB3O95704 486 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 CEACAM1P13688 526 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 SPINK2P20155 84 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 CSRP1P21291 193 aaKnown RBP16.23■□□□□ 0.19
SEC13-206ENST00000397102 PAX3P23760 479 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 DDX6P26196 483 aaKnown RBP eCLIP16.23■□□□□ 0.19
SEC13-206ENST00000397102 AVPR1AP37288 418 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 MATR3P43243 847 aaKnown RBP eCLIP16.23■□□□□ 0.19
SEC13-206ENST00000397102 GUCY2FP51841 1108 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 LILRA4P59901 499 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 GUCY1B3Q02153 619 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 TAF12Q16514 161 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 MGAT5BQ3V5L5 792 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 SLC39A12Q504Y0 691 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 C4orf32Q8N8J7 132 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 IGSF22Q8N9C0 903 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 TMEM161BQ8NDZ6 487 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 OR10T2Q8NGX3 314 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 GATA6Q92908 595 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 SENP8Q96LD8 212 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 TSPAN18Q96SJ8 248 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 P2RY13Q9BPV8 354 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 RAB34Q9BZG1 259 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 HAPLN2Q9GZV7 340 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 FOXP1Q9H334 677 aaPredicted RBP16.23■□□□□ 0.19
SEC13-206ENST00000397102 FBRSL1Q9HCM7 1045 aaKnown RBP16.23■□□□□ 0.19
SEC13-206ENST00000397102 IGF2RP11717 2491 aa16.23■□□□□ 0.19
SEC13-206ENST00000397102 THADAQ6YHU6 1953 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 TCHHQ07283 1943 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 LACTBL1A8MY62 500 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 PPEF2O14830 753 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 CYP11A1P05108 521 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 MAPTP10636 758 aaKnown RBP16.22■□□□□ 0.19
SEC13-206ENST00000397102 PLS3P13797 630 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 GUCY2CP25092 1073 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 TNFSF9P41273 254 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 TRAPPC10P48553 1259 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 GALK1P51570 392 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 SMTNP53814 917 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 ANAPC15P60006 121 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 BFSP1Q12934 665 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 DMC1Q14565 340 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 KYAT1Q16773 422 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 C11orf74Q86VG3 221 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 MAB21L3Q8N8X9 362 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 RPLP0P6Q8NHW5 317 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 C2orf15Q8WU43 125 aaKnown RBP16.22■□□□□ 0.19
SEC13-206ENST00000397102 USP13Q92995 863 aaPredicted RBP16.22■□□□□ 0.19
SEC13-206ENST00000397102 ACDQ96AP0 544 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 ZCWPW1Q9H0M4 648 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 TMEM9BQ9NQ34 198 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 TDP1Q9NUW8 608 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 TBX20Q9UMR3 447 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 CCL26Q9Y258 94 aa16.22■□□□□ 0.19
SEC13-206ENST00000397102 SRRM3A6NNA2 597 aaPredicted RBP16.21■□□□□ 0.19
SEC13-206ENST00000397102 SOBPA7XYQ1 873 aa16.21■□□□□ 0.19
SEC13-206ENST00000397102 KHNYNO15037 678 aaKnown RBP16.21■□□□□ 0.19
SEC13-206ENST00000397102 ARSAP15289 507 aa16.21■□□□□ 0.19
SEC13-206ENST00000397102 GBP1P32455 592 aa16.21■□□□□ 0.19
SEC13-206ENST00000397102 PDGFRLQ15198 375 aa16.21■□□□□ 0.19
SEC13-206ENST00000397102 SPATA1Q5VX52 437 aa16.21■□□□□ 0.19
SEC13-206ENST00000397102 KRT79Q5XKE5 535 aa16.21■□□□□ 0.19
SEC13-206ENST00000397102 PMS2CLQ68D20 193 aa16.21■□□□□ 0.19
SEC13-206ENST00000397102 CC2D1AQ6P1N0 951 aaPredicted RBP16.21■□□□□ 0.19
SEC13-206ENST00000397102 TMEM150AQ86TG1 271 aa16.21■□□□□ 0.19
SEC13-206ENST00000397102 SPPL2BQ8TCT7 592 aa16.21■□□□□ 0.19
SEC13-206ENST00000397102 GIPC2Q8TF65 315 aa16.21■□□□□ 0.19
SEC13-206ENST00000397102 SCNM1Q9BWG6 230 aa16.21■□□□□ 0.19
SEC13-206ENST00000397102 ABCA7Q8IZY2 2146 aa16.21■□□□□ 0.18
SEC13-206ENST00000397102 SCN1AP35498 2009 aa16.2■□□□□ 0.18
SEC13-206ENST00000397102 TOP3BO95985 862 aaKnown RBP16.2■□□□□ 0.18
SEC13-206ENST00000397102 F11P03951 625 aa16.2■□□□□ 0.18
SEC13-206ENST00000397102 ADRB2P07550 413 aa16.2■□□□□ 0.18
SEC13-206ENST00000397102 HAPLN1P10915 354 aaPredicted RBP16.2■□□□□ 0.18
SEC13-206ENST00000397102 GJA4P35212 333 aa16.2■□□□□ 0.18
SEC13-206ENST00000397102 DGKEP52429 567 aa16.2■□□□□ 0.18
SEC13-206ENST00000397102 NLRP12P59046 1061 aa16.2■□□□□ 0.18
SEC13-206ENST00000397102 SMARCB1Q12824 385 aa16.2■□□□□ 0.18
SEC13-206ENST00000397102 ZNF268Q14587 947 aaPredicted RBP16.2■□□□□ 0.18
SEC13-206ENST00000397102 ENOX2Q16206 610 aaKnown RBP16.2■□□□□ 0.18
SEC13-206ENST00000397102 KCNK18Q7Z418 384 aa16.2■□□□□ 0.18
SEC13-206ENST00000397102 RIN3Q8TB24 985 aa16.2■□□□□ 0.18
SEC13-206ENST00000397102 BICD1Q96G01 975 aa16.2■□□□□ 0.18
SEC13-206ENST00000397102 C8orf76Q96K31 380 aa16.2■□□□□ 0.18
SEC13-206ENST00000397102 RPF1Q9H9Y2 349 aaKnown RBP16.2■□□□□ 0.18
SEC13-206ENST00000397102 DSEQ9UL01 958 aa16.2■□□□□ 0.18
SEC13-206ENST00000397102 NOL7Q9UMY1 257 aaKnown RBP16.2■□□□□ 0.18
SEC13-206ENST00000397102 ZFYVE26Q68DK2 2539 aa16.2■□□□□ 0.18
SEC13-206ENST00000397102 PP2D1A8MPX8 630 aa16.19■□□□□ 0.18
SEC13-206ENST00000397102 H0YCG3 227 aa16.19■□□□□ 0.18
SEC13-206ENST00000397102 CDX4O14627 284 aaPredicted RBP16.19■□□□□ 0.18
SEC13-206ENST00000397102 FAM189A1O60320 539 aa16.19■□□□□ 0.18
SEC13-206ENST00000397102 U2AF2P26368 475 aaKnown RBP eCLIP16.19■□□□□ 0.185e-11■■□□□ 11.9
SEC13-206ENST00000397102 NMT1P30419 496 aaKnown RBP16.19■□□□□ 0.18
SEC13-206ENST00000397102 ST3GAL1Q11201 340 aa16.19■□□□□ 0.18
SEC13-206ENST00000397102 NBR1Q14596 966 aa16.19■□□□□ 0.18
SEC13-206ENST00000397102 USP39Q53GS9 565 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms