RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 FNDC3BQ53EP0 1204 aaKnown RBP18.2■□□□□ 0.5
MCF2L-208ENST00000397030 RABGAP1LQ5R372 815 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 HIBCHQ6NVY1 386 aaPredicted RBP18.2■□□□□ 0.5
MCF2L-208ENST00000397030 HERC6Q8IVU3 1022 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 ZNF555Q8NEP9 628 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 PCDHGA4Q9Y5G9 962 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 SRP72O76094 671 aaKnown RBP18.2■□□□□ 0.5
MCF2L-208ENST00000397030 HLA-DRAP01903 254 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 POU4F1Q01851 419 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 PKD2L2Q9NZM6 624 aa18.2■□□□□ 0.5
MCF2L-208ENST00000397030 SPATA31A1Q5TZJ5 1347 aa18.19■□□□□ 0.5
MCF2L-208ENST00000397030 STK36Q9NRP7 1315 aa18.19■□□□□ 0.5
MCF2L-208ENST00000397030 SLC12A8A0AV02 714 aa18.19■□□□□ 0.5
MCF2L-208ENST00000397030 MYL2P10916 166 aa18.19■□□□□ 0.5
MCF2L-208ENST00000397030 VEGFAP15692 232 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-208ENST00000397030 CARSP49589 748 aaKnown RBP18.19■□□□□ 0.5
MCF2L-208ENST00000397030 HIRAP54198 1017 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-208ENST00000397030 CENPPQ6IPU0 288 aa18.19■□□□□ 0.5
MCF2L-208ENST00000397030 DDIT4Q9NX09 232 aa18.19■□□□□ 0.5
MCF2L-208ENST00000397030 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.19■□□□□ 0.5
MCF2L-208ENST00000397030 ADCY3O60266 1144 aa18.19■□□□□ 0.5
MCF2L-208ENST00000397030 ABCE1P61221 599 aaKnown RBP18.19■□□□□ 0.5
MCF2L-208ENST00000397030 HDAC6Q9UBN7 1215 aa18.19■□□□□ 0.5
MCF2L-208ENST00000397030 F8W810 466 aa18.19■□□□□ 0.5
MCF2L-208ENST00000397030 SUPT20HL2P0C7V6 817 aa18.19■□□□□ 0.5
MCF2L-208ENST00000397030 EPHB2P29323 1055 aa18.19■□□□□ 0.5
MCF2L-208ENST00000397030 RPS7P62081 194 aaKnown RBP18.19■□□□□ 0.5
MCF2L-208ENST00000397030 RALGDSQ12967 914 aa18.19■□□□□ 0.5
MCF2L-208ENST00000397030 LAMB3Q13751 1172 aa18.19■□□□□ 0.5
MCF2L-208ENST00000397030 MAPRE2Q15555 327 aa18.19■□□□□ 0.5
MCF2L-208ENST00000397030 ICA1LQ8NDH6 482 aa18.19■□□□□ 0.5
MCF2L-208ENST00000397030 INPP5DQ92835 1189 aa18.19■□□□□ 0.5
MCF2L-208ENST00000397030 AKAP7Q9P0M2 348 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-208ENST00000397030 ALDH2P05091 517 aa18.19■□□□□ 0.5
MCF2L-208ENST00000397030 ENO1P06733 434 aaKnown RBP18.19■□□□□ 0.5
MCF2L-208ENST00000397030 TCN1P20061 433 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-208ENST00000397030 OXCT1P55809 520 aa18.19■□□□□ 0.5
MCF2L-208ENST00000397030 FGFR2P21802 821 aa18.19■□□□□ 0.5
MCF2L-208ENST00000397030 NECTIN1Q15223 517 aa18.19■□□□□ 0.5
MCF2L-208ENST00000397030 SHCBP1LQ9BZQ2 653 aa18.19■□□□□ 0.5
MCF2L-208ENST00000397030 MARCOQ9UEW3 520 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-208ENST00000397030 GTF2E2P29084 291 aaKnown RBP18.18■□□□□ 0.5
MCF2L-208ENST00000397030 MAPRE1Q15691 268 aaKnown RBP18.18■□□□□ 0.5
MCF2L-208ENST00000397030 N6AMT1Q9Y5N5 214 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 NR2E3Q9Y5X4 410 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 C2orf81A6NN90 581 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 CBX4O00257 560 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 DGKIO75912 1065 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 KRT4P19013 534 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 NCKAP1LP55160 1127 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 PGLYRP2Q96PD5 576 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 NDEL1Q9GZM8 345 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 ZC3H7BQ9UGR2 993 aaKnown RBP18.18■□□□□ 0.5
MCF2L-208ENST00000397030 TRMT6Q9UJA5 497 aaKnown RBP18.18■□□□□ 0.5
MCF2L-208ENST00000397030 RASSF9O75901 435 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 CD2BP2O95400 341 aaKnown RBP18.18■□□□□ 0.5
MCF2L-208ENST00000397030 MTFR1Q15390 333 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 PPM1LQ5SGD2 360 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 CLEC4FQ8N1N0 589 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 TIPINQ9BVW5 301 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 MAP3K10Q02779 954 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 PGS1Q32NB8 556 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 FUT11Q495W5 492 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 FRMD5Q7Z6J6 570 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 YY1AP1Q9H869 796 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 LRRIQ3A6PVS8 624 aaPredicted RBP18.18■□□□□ 0.5
MCF2L-208ENST00000397030 PRR23D1E9PI22 279 aaPredicted RBP18.18■□□□□ 0.5
MCF2L-208ENST00000397030 KRT8P05787 483 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 FYNP06241 537 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 PRR23D2P0DMB1 279 aaPredicted RBP18.18■□□□□ 0.5
MCF2L-208ENST00000397030 EFHC1Q5JVL4 640 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 GRAMD4Q6IC98 578 aa18.18■□□□□ 0.5
MCF2L-208ENST00000397030 GRK3P35626 688 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 ADGRF2Q8IZF7 708 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.17■□□□□ 0.51e-6■■■■■ 56.2
MCF2L-208ENST00000397030 MED8Q96G25 268 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 CALR3Q96L12 384 aaKnown RBP18.17■□□□□ 0.5
MCF2L-208ENST00000397030 NCKAP1Q9Y2A7 1128 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 AP3B1O00203 1094 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 NPEPPSP55786 919 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 RINLQ6ZS11 566 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 MB21D2Q8IYB1 491 aaPredicted RBP18.17■□□□□ 0.5
MCF2L-208ENST00000397030 RIN3Q8TB24 985 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 ARHGEF26Q96DR7 871 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 KCNH7Q9NS40 1196 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 EXTL3O43909 919 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 SYTL1Q8IYJ3 562 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 ISCA1Q9BUE6 129 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 TARS2Q9BW92 718 aaKnown RBP18.17■□□□□ 0.5
MCF2L-208ENST00000397030 TRIM10Q9UDY6 481 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 TIMM13Q9Y5L4 95 aaPredicted RBP18.17■□□□□ 0.5
MCF2L-208ENST00000397030 RHOCP08134 193 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 ENO3P13929 434 aaPredicted RBP18.17■□□□□ 0.5
MCF2L-208ENST00000397030 CYP2C19P33261 490 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 RHOAP61586 193 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 CNTN1Q12860 1018 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 TRIM32Q13049 653 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 ITIH5Q86UX2 942 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 SKA1Q96BD8 255 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 DYRK1BQ9Y463 629 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms