RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 CAV1Q03135 178 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 SNX1Q13596 522 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 CCNG2Q16589 344 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 ILDR2Q71H61 639 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 TFAP2BQ92481 460 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 ARL8AQ96BM9 186 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 CAPS2Q9BXY5 557 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 NEUROG2Q9H2A3 272 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 PPFIA2O75334 1257 aa17.07■□□□□ 0.32
SNX6-202ENST00000396526 ECM2O94769 699 aaPredicted RBP17.07■□□□□ 0.32
SNX6-202ENST00000396526 STAU1O95793 577 aaKnown RBP17.07■□□□□ 0.32
SNX6-202ENST00000396526 HMGCRP04035 888 aa17.07■□□□□ 0.32
SNX6-202ENST00000396526 KRT1P04264 644 aa17.07■□□□□ 0.32
SNX6-202ENST00000396526 SMIM10L2AP0DMW4 78 aa17.07■□□□□ 0.32
SNX6-202ENST00000396526 SMIM10L2BP0DMW5 78 aa17.07■□□□□ 0.32
SNX6-202ENST00000396526 ITIH2P19823 946 aa17.07■□□□□ 0.32
SNX6-202ENST00000396526 PMS2P54278 862 aa17.07■□□□□ 0.32
SNX6-202ENST00000396526 CEP128Q6ZU80 1094 aa17.07■□□□□ 0.32
SNX6-202ENST00000396526 CCDC89Q8N998 374 aa17.07■□□□□ 0.32
SNX6-202ENST00000396526 FBXO25Q8TCJ0 367 aa17.07■□□□□ 0.32
SNX6-202ENST00000396526 HEMGNQ9BXL5 484 aa17.07■□□□□ 0.32
SNX6-202ENST00000396526 TCRBV7S2A1N4TA0A589 114 aa17.07■□□□□ 0.32
SNX6-202ENST00000396526 GOLGA8SH3BPF8 625 aa17.07■□□□□ 0.32
SNX6-202ENST00000396526 NPTXRO95502 500 aa17.07■□□□□ 0.32
SNX6-202ENST00000396526 F2P00734 622 aa17.07■□□□□ 0.32
SNX6-202ENST00000396526 RDXP35241 583 aaKnown RBP17.07■□□□□ 0.32
SNX6-202ENST00000396526 RAP1GAPP47736 663 aa17.07■□□□□ 0.32
SNX6-202ENST00000396526 RAD23BP54727 409 aa17.07■□□□□ 0.32
SNX6-202ENST00000396526 NFX1Q12986 1120 aaKnown RBP17.07■□□□□ 0.32
SNX6-202ENST00000396526 CNGA2Q16280 664 aa17.07■□□□□ 0.32
SNX6-202ENST00000396526 TTC27Q6P3X3 843 aa17.07■□□□□ 0.32
SNX6-202ENST00000396526 NT5C1AQ9BXI3 368 aa17.07■□□□□ 0.32
SNX6-202ENST00000396526 PLXNB2O15031 1838 aa17.07■□□□□ 0.32
SNX6-202ENST00000396526 CILPO75339 1184 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 KRT7P08729 469 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 PSMA2P25787 234 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 RPL7AP62424 266 aaKnown RBP17.06■□□□□ 0.32
SNX6-202ENST00000396526 KRT17Q04695 432 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 ZNF268Q14587 947 aaPredicted RBP17.06■□□□□ 0.32
SNX6-202ENST00000396526 MFSD10Q14728 455 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 KRT71Q3SY84 523 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 MARCH8Q5T0T0 291 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 KCTD16Q68DU8 428 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 GSTA5Q7RTV2 222 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 CCHCR1Q8TD31 782 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 WHRNQ9P202 907 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 SIGLEC16A6NMB1 481 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 RNF8O76064 485 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 TAS2R40P59535 323 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 MORN1Q5T089 497 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 DENND1BQ6P3S1 775 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 DPH6Q7L8W6 267 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 RNF25Q96BH1 459 aaPredicted RBP17.06■□□□□ 0.32
SNX6-202ENST00000396526 DCLK3Q9C098 648 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 SMYD3Q9H7B4 428 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 BCCIPQ9P287 314 aaKnown RBP eCLIP17.06■□□□□ 0.32
SNX6-202ENST00000396526 PLXNA1Q9UIW2 1896 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 ATF2P15336 505 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 RPL21P46778 160 aaKnown RBP17.06■□□□□ 0.32
SNX6-202ENST00000396526 ZSCAN26Q16670 478 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 PRAMEF19Q5SWL8 479 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 SOCS4Q8WXH5 440 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 PABPC3Q9H361 631 aaKnown RBP17.06■□□□□ 0.32
SNX6-202ENST00000396526 ZDHHC18Q9NUE0 388 aa17.06■□□□□ 0.32
SNX6-202ENST00000396526 M0QYV0 167 aa17.05■□□□□ 0.32
SNX6-202ENST00000396526 NDC80O14777 642 aa17.05■□□□□ 0.32
SNX6-202ENST00000396526 MYL3P08590 195 aa17.05■□□□□ 0.32
SNX6-202ENST00000396526 ADCY8P40145 1251 aa17.05■□□□□ 0.32
SNX6-202ENST00000396526 TMEM62Q0P6H9 643 aa17.05■□□□□ 0.32
SNX6-202ENST00000396526 SIX1Q15475 284 aaPredicted RBP17.05■□□□□ 0.32
SNX6-202ENST00000396526 FNIP1Q8TF40 1166 aa17.05■□□□□ 0.32
SNX6-202ENST00000396526 PIK3R5Q8WYR1 880 aa17.05■□□□□ 0.32
SNX6-202ENST00000396526 TMBIM4Q9HC24 238 aa17.05■□□□□ 0.32
SNX6-202ENST00000396526 ZFYVE28Q9HCC9 887 aa17.05■□□□□ 0.32
SNX6-202ENST00000396526 Q9Y3F1 56 aa17.05■□□□□ 0.32
SNX6-202ENST00000396526 CYP2B6P20813 491 aa17.05■□□□□ 0.32
SNX6-202ENST00000396526 PSEN2P49810 448 aa17.05■□□□□ 0.32
SNX6-202ENST00000396526 DNAJC21Q5F1R6 531 aaKnown RBP17.05■□□□□ 0.32
SNX6-202ENST00000396526 CYP4A22Q5TCH4 519 aa17.05■□□□□ 0.32
SNX6-202ENST00000396526 SCARA3Q6AZY7 606 aa17.05■□□□□ 0.32
SNX6-202ENST00000396526 SLC4A11Q8NBS3 891 aa17.05■□□□□ 0.32
SNX6-202ENST00000396526 SNF8Q96H20 258 aa17.05■□□□□ 0.32
SNX6-202ENST00000396526 NR1D1P20393 614 aa17.05■□□□□ 0.32
SNX6-202ENST00000396526 TTMPQ5BVD1 217 aa17.05■□□□□ 0.32
SNX6-202ENST00000396526 ZDHHC14Q8IZN3 488 aa17.05■□□□□ 0.32
SNX6-202ENST00000396526 NIPA2Q8N8Q9 360 aa17.05■□□□□ 0.32
SNX6-202ENST00000396526 GNEQ9Y223 722 aaKnown RBP17.05■□□□□ 0.32
SNX6-202ENST00000396526 DARSP14868 501 aaKnown RBP17.04■□□□□ 0.32
SNX6-202ENST00000396526 ACAP1Q15027 740 aa17.04■□□□□ 0.32
SNX6-202ENST00000396526 OSMRQ99650 979 aa17.04■□□□□ 0.32
SNX6-202ENST00000396526 STMN4Q9H169 189 aaPredicted RBP17.04■□□□□ 0.32
SNX6-202ENST00000396526 HESX1Q9UBX0 185 aa17.04■□□□□ 0.32
SNX6-202ENST00000396526 TNPO2O14787 897 aaKnown RBP17.04■□□□□ 0.32
SNX6-202ENST00000396526 GJB6O95452 261 aa17.04■□□□□ 0.32
SNX6-202ENST00000396526 FGFR4P22455 802 aa17.04■□□□□ 0.32
SNX6-202ENST00000396526 FLT3P36888 993 aa17.04■□□□□ 0.32
SNX6-202ENST00000396526 AGBL2Q5U5Z8 902 aa17.04■□□□□ 0.32
SNX6-202ENST00000396526 POLNQ7Z5Q5 900 aa17.04■□□□□ 0.32
SNX6-202ENST00000396526 WDTC1Q8N5D0 677 aa17.04■□□□□ 0.32
SNX6-202ENST00000396526 TSPAN18Q96SJ8 248 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 316.4 ms