RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 SYT15Q9BQS2 421 aa22.74■■□□□ 1.23
FXN-202ENST00000396364 CLSTN3Q9BQT9 956 aa22.74■■□□□ 1.23
FXN-202ENST00000396364 NT5C1AQ9BXI3 368 aa22.74■■□□□ 1.23
FXN-202ENST00000396364 TBC1D4O60343 1298 aa22.73■■□□□ 1.23
FXN-202ENST00000396364 RPL17P18621 184 aaKnown RBP22.73■■□□□ 1.23
FXN-202ENST00000396364 ELF1P32519 619 aa22.73■■□□□ 1.23
FXN-202ENST00000396364 NRIP1P48552 1158 aa22.73■■□□□ 1.23
FXN-202ENST00000396364 ADGRE1Q14246 886 aa22.73■■□□□ 1.23
FXN-202ENST00000396364 NR1I3Q14994 352 aa22.73■■□□□ 1.23
FXN-202ENST00000396364 DUSP6Q16828 381 aa22.73■■□□□ 1.23
FXN-202ENST00000396364 INTS6LQ5JSJ4 861 aaKnown RBP22.73■■□□□ 1.23
FXN-202ENST00000396364 RRAGAQ7L523 313 aa22.73■■□□□ 1.23
FXN-202ENST00000396364 GAS2L3Q86XJ1 694 aa22.73■■□□□ 1.23
FXN-202ENST00000396364 GLYCTKQ8IVS8 523 aa22.73■■□□□ 1.23
FXN-202ENST00000396364 ELMO3Q96BJ8 720 aa22.73■■□□□ 1.23
FXN-202ENST00000396364 ZCWPW1Q9H0M4 648 aa22.73■■□□□ 1.23
FXN-202ENST00000396364 ATG2AQ2TAZ0 1938 aa22.72■■□□□ 1.23
FXN-202ENST00000396364 PDGFRBP09619 1106 aa22.72■■□□□ 1.23
FXN-202ENST00000396364 NDST1P52848 882 aa22.72■■□□□ 1.23
FXN-202ENST00000396364 ROR1Q01973 937 aa22.72■■□□□ 1.23
FXN-202ENST00000396364 GPR17Q13304 367 aa22.72■■□□□ 1.23
FXN-202ENST00000396364 TCEAL5Q5H9L2 206 aa22.72■■□□□ 1.23
FXN-202ENST00000396364 KLHDC7AQ5VTJ3 777 aa22.72■■□□□ 1.23
FXN-202ENST00000396364 SARM1Q6SZW1 724 aa22.72■■□□□ 1.23
FXN-202ENST00000396364 C4orf50Q6ZRC1 276 aa22.72■■□□□ 1.23
FXN-202ENST00000396364 RBM23Q86U06 439 aaKnown RBP22.72■■□□□ 1.23
FXN-202ENST00000396364 OSTM1Q86WC4 334 aa22.72■■□□□ 1.23
FXN-202ENST00000396364 FMNL3Q8IVF7 1028 aa22.72■■□□□ 1.23
FXN-202ENST00000396364 ARHGEF19Q8IW93 802 aa22.72■■□□□ 1.23
FXN-202ENST00000396364 MICALL1Q8N3F8 863 aa22.72■■□□□ 1.23
FXN-202ENST00000396364 ZNF461Q8TAF7 563 aa22.72■■□□□ 1.23
FXN-202ENST00000396364 IQCDQ96DY2 449 aa22.72■■□□□ 1.23
FXN-202ENST00000396364 NAP1L5Q96NT1 182 aaPredicted RBP22.72■■□□□ 1.23
FXN-202ENST00000396364 GUCD1Q96NT3 240 aa22.72■■□□□ 1.23
FXN-202ENST00000396364 SDCBP2Q9H190 292 aa22.72■■□□□ 1.23
FXN-202ENST00000396364 FAM207AQ9NSI2 230 aaPredicted RBP22.72■■□□□ 1.23
FXN-202ENST00000396364 DNAJC12Q9UKB3 198 aa22.72■■□□□ 1.23
FXN-202ENST00000396364 PCDHB4Q9Y5E5 795 aa22.72■■□□□ 1.23
FXN-202ENST00000396364 PCDHGC5Q9Y5F6 944 aa22.72■■□□□ 1.23
FXN-202ENST00000396364 TRANK1O15050 2925 aa22.71■■□□□ 1.23
FXN-202ENST00000396364 SPDYE4A6NLX3 237 aa22.71■■□□□ 1.23
FXN-202ENST00000396364 CLASP2O75122 1294 aaKnown RBP22.71■■□□□ 1.23
FXN-202ENST00000396364 CILPO75339 1184 aa22.71■■□□□ 1.23
FXN-202ENST00000396364 UCHL3P15374 230 aa22.71■■□□□ 1.23
FXN-202ENST00000396364 SLC39A12Q504Y0 691 aa22.71■■□□□ 1.23
FXN-202ENST00000396364 RTL10Q7L3V2 364 aa22.71■■□□□ 1.23
FXN-202ENST00000396364 PALB2Q86YC2 1186 aa22.71■■□□□ 1.23
FXN-202ENST00000396364 B3GALNT2Q8NCR0 500 aa22.71■■□□□ 1.23
FXN-202ENST00000396364 OR10T2Q8NGX3 314 aa22.71■■□□□ 1.23
FXN-202ENST00000396364 HDAC7Q8WUI4 952 aa22.71■■□□□ 1.23
FXN-202ENST00000396364 CASP10Q92851 521 aa22.71■■□□□ 1.23
FXN-202ENST00000396364 ARID3AQ99856 593 aa22.71■■□□□ 1.23
FXN-202ENST00000396364 NUP58Q9BVL2 599 aa22.71■■□□□ 1.23
FXN-202ENST00000396364 TRIM5Q9C035 493 aa22.71■■□□□ 1.23
FXN-202ENST00000396364 PLEKHA4Q9H4M7 779 aa22.71■■□□□ 1.23
FXN-202ENST00000396364 AFF4Q9UHB7 1163 aaKnown RBP22.71■■□□□ 1.23
FXN-202ENST00000396364 SIK3Q9Y2K2 1263 aa22.71■■□□□ 1.23
FXN-202ENST00000396364 ATP8B3O60423 1300 aa22.71■■□□□ 1.23
FXN-202ENST00000396364 PER2O15055 1255 aa22.7■■□□□ 1.22
FXN-202ENST00000396364 TEX33O43247 280 aa22.7■■□□□ 1.22
FXN-202ENST00000396364 PTPN1P18031 435 aaKnown RBP22.7■■□□□ 1.22
FXN-202ENST00000396364 ACAT1P24752 427 aaKnown RBP22.7■■□□□ 1.22
FXN-202ENST00000396364 LMO2P25791 158 aa22.7■■□□□ 1.22
FXN-202ENST00000396364 CLCN4P51793 760 aa22.7■■□□□ 1.22
FXN-202ENST00000396364 RAPGEF1Q13905 1077 aa22.7■■□□□ 1.22
FXN-202ENST00000396364 ARHGAP44Q17R89 818 aa22.7■■□□□ 1.22
FXN-202ENST00000396364 LIN9Q5TKA1 542 aa22.7■■□□□ 1.22
FXN-202ENST00000396364 CCDC149Q6ZUS6 474 aa22.7■■□□□ 1.22
FXN-202ENST00000396364 CACNA2D4Q7Z3S7 1137 aa22.7■■□□□ 1.22
FXN-202ENST00000396364 ADGRD2Q7Z7M1 963 aa22.7■■□□□ 1.22
FXN-202ENST00000396364 SPATA2LQ8IUW3 424 aaPredicted RBP22.7■■□□□ 1.22
FXN-202ENST00000396364 SPPL2BQ8TCT7 592 aa22.7■■□□□ 1.22
FXN-202ENST00000396364 SPAG5Q96R06 1193 aa22.7■■□□□ 1.22
FXN-202ENST00000396364 RTP3Q9BQQ7 232 aa22.7■■□□□ 1.22
FXN-202ENST00000396364 XPO4Q9C0E2 1151 aaKnown RBP22.7■■□□□ 1.22
FXN-202ENST00000396364 IGFLR1Q9H665 355 aa22.7■■□□□ 1.22
FXN-202ENST00000396364 SIX2Q9NPC8 291 aa22.7■■□□□ 1.22
FXN-202ENST00000396364 HSFX1Q9UBD0 423 aa22.7■■□□□ 1.22
FXN-202ENST00000396364 KIAA1257Q9ULG3 409 aa22.7■■□□□ 1.22
FXN-202ENST00000396364 PCDHB5Q9Y5E4 795 aa22.7■■□□□ 1.22
FXN-202ENST00000396364 WDR27A2RRH5 827 aa22.69■■□□□ 1.22
FXN-202ENST00000396364 ABLIM3O94929 683 aa22.69■■□□□ 1.22
FXN-202ENST00000396364 KRT5P13647 590 aa22.69■■□□□ 1.22
FXN-202ENST00000396364 ATF2P15336 505 aa22.69■■□□□ 1.22
FXN-202ENST00000396364 TMEM270Q6UE05 265 aa22.69■■□□□ 1.22
FXN-202ENST00000396364 CRYBG2Q8N1P7 616 aa22.69■■□□□ 1.22
FXN-202ENST00000396364 EFHBQ8N7U6 833 aa22.69■■□□□ 1.22
FXN-202ENST00000396364 MYCBPAPQ8TBZ2 947 aa22.69■■□□□ 1.22
FXN-202ENST00000396364 TMEM176AQ96HP8 235 aa22.69■■□□□ 1.22
FXN-202ENST00000396364 FUBP3Q96I24 572 aaKnown RBP eCLIP22.69■■□□□ 1.22
FXN-202ENST00000396364 STK33Q9BYT3 514 aa22.69■■□□□ 1.22
FXN-202ENST00000396364 DZANK1Q9NVP4 752 aa22.69■■□□□ 1.22
FXN-202ENST00000396364 PRRG1O14668 218 aa22.68■■□□□ 1.22
FXN-202ENST00000396364 TGM5O43548 720 aa22.68■■□□□ 1.22
FXN-202ENST00000396364 PAEPP09466 180 aa22.68■■□□□ 1.22
FXN-202ENST00000396364 POLR2FP61218 127 aaKnown RBP22.68■■□□□ 1.22
FXN-202ENST00000396364 PSMC1P62191 440 aaKnown RBP22.68■■□□□ 1.22
FXN-202ENST00000396364 ZNF394Q53GI3 561 aa22.68■■□□□ 1.22
FXN-202ENST00000396364 IQCEQ6IPM2 695 aa22.68■■□□□ 1.22
FXN-202ENST00000396364 FAM171BQ6P995 826 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms