RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 PLA2G4AP47712 749 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 ERVK-24P63145 666 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 PTK6Q13882 451 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 GTF2H3Q13889 308 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 EPC2Q52LR7 807 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 SPDYAQ5MJ70 313 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 FBXW10Q5XX13 1052 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 EFL1Q7Z2Z2 1120 aaKnown RBP18.1■□□□□ 0.49
UBFD1-201ENST00000395878 FAM71DQ8N9W8 422 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 RUSC1Q9BVN2 902 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 INO80Q9ULG1 1556 aaPredicted RBP18.1■□□□□ 0.49
UBFD1-201ENST00000395878 H0Y626 953 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 TRIM16O95361 564 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 SYF2O95926 243 aaKnown RBP18.1■□□□□ 0.49
UBFD1-201ENST00000395878 PRLRP16471 622 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 GNL1P36915 607 aaPredicted RBP18.1■□□□□ 0.49
UBFD1-201ENST00000395878 KLC1Q07866 573 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 ANGEL2Q5VTE6 544 aaKnown RBP18.1■□□□□ 0.49
UBFD1-201ENST00000395878 IL31Q6EBC2 164 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 LRRC8BQ6P9F7 803 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 EME1Q96AY2 570 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 KLF6Q99612 283 aaPredicted RBP18.1■□□□□ 0.49
UBFD1-201ENST00000395878 FAM95CA0A1B0GW59 222 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 PTGER2P43116 358 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 NOTUMQ6P988 496 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 TAAR1Q96RJ0 339 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.1■□□□□ 0.49
UBFD1-201ENST00000395878 HPSEQ9Y251 543 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 RGS4P49798 205 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 RPS6P62753 249 aaKnown RBP18.1■□□□□ 0.49
UBFD1-201ENST00000395878 KIZQ2M2Z5 673 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 NUP93Q8N1F7 819 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 C1orf131Q8NDD1 294 aaKnown RBP18.1■□□□□ 0.49
UBFD1-201ENST00000395878 ZNF507Q8TCN5 953 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 ADNPQ9H2P0 1102 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 LATS2Q9NRM7 1088 aa18.1■□□□□ 0.49
UBFD1-201ENST00000395878 IQSEC2Q5JU85 1478 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 CEP152O94986 1710 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 SEC24DO94855 1032 aaPredicted RBP18.09■□□□□ 0.49
UBFD1-201ENST00000395878 ICAM1P05362 532 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 ATP6V1E1P36543 226 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 FDFT1P37268 417 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 EN1Q05925 392 aaPredicted RBP18.09■□□□□ 0.49
UBFD1-201ENST00000395878 ATG4CQ96DT6 458 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 NR1H4Q96RI1 486 aaPredicted RBP18.09■□□□□ 0.49
UBFD1-201ENST00000395878 PABPC3Q9H361 631 aaKnown RBP18.09■□□□□ 0.49
UBFD1-201ENST00000395878 TRPC7Q9HCX4 862 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 SYNDIG1LA6NDD5 238 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 HMBSP08397 361 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 HSPA1AP0DMV8 641 aaKnown RBP18.09■□□□□ 0.49
UBFD1-201ENST00000395878 HSPA1BP0DMV9 641 aaKnown RBP18.09■□□□□ 0.49
UBFD1-201ENST00000395878 ITPK1Q13572 414 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 LAMC2Q13753 1193 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 DAB2IPQ5VWQ8 1189 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 LINC00523Q86TU6 105 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 IPMKQ8NFU5 416 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 BLOC1S6Q9UL45 172 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 A0A087X0T9 212 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 PLEKP08567 350 aaPredicted RBP18.09■□□□□ 0.49
UBFD1-201ENST00000395878 FAM228BP0C875 321 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 HLA-DPA1P20036 260 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 RPS12P25398 132 aaKnown RBP18.09■□□□□ 0.49
UBFD1-201ENST00000395878 SEC24CP53992 1094 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 MTFR1Q15390 333 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 WDR93Q6P2C0 686 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 KDM7AQ6ZMT4 941 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 C3orf20Q8ND61 904 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 NSL1Q96IY1 281 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 AIM2O14862 343 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 TAF6P49848 677 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 ST8SIA6P61647 398 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 PCSK7Q16549 785 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 CYP4A22Q5TCH4 519 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 GLB1LQ6UWU2 654 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 STKLD1Q8NE28 680 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 ARMC2Q8NEN0 867 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 CASKIN2Q8WXE0 1202 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 ZNF669Q96BR6 464 aaPredicted RBP18.09■□□□□ 0.49
UBFD1-201ENST00000395878 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.09■□□□□ 0.49
UBFD1-201ENST00000395878 GID8Q9NWU2 228 aa18.09■□□□□ 0.49
UBFD1-201ENST00000395878 C5orf58C9J3I9 102 aa18.08■□□□□ 0.49
UBFD1-201ENST00000395878 APOA1P02647 267 aa18.08■□□□□ 0.49
UBFD1-201ENST00000395878 AKT1P31749 480 aa18.08■□□□□ 0.49
UBFD1-201ENST00000395878 MKRN4PQ13434 485 aaPredicted RBP18.08■□□□□ 0.49
UBFD1-201ENST00000395878 TMEM39BQ9GZU3 492 aa18.08■□□□□ 0.49
UBFD1-201ENST00000395878 MYOZ2Q9NPC6 264 aa18.08■□□□□ 0.49
UBFD1-201ENST00000395878 CD274Q9NZQ7 290 aa18.08■□□□□ 0.49
UBFD1-201ENST00000395878 PKP3Q9Y446 797 aa18.08■□□□□ 0.49
UBFD1-201ENST00000395878 SUPT3HB4E1H0 165 aa18.08■□□□□ 0.49
UBFD1-201ENST00000395878 CD44P16070 742 aaKnown RBP18.08■□□□□ 0.49
UBFD1-201ENST00000395878 TMEM62Q0P6H9 643 aa18.08■□□□□ 0.49
UBFD1-201ENST00000395878 TEX9Q8N6V9 391 aa18.08■□□□□ 0.49
UBFD1-201ENST00000395878 RAET1EQ8TD07 263 aa18.08■□□□□ 0.49
UBFD1-201ENST00000395878 GGA3Q9NZ52 723 aa18.08■□□□□ 0.49
UBFD1-201ENST00000395878 HNRNPRO43390 633 aaKnown RBP18.08■□□□□ 0.48
UBFD1-201ENST00000395878 ZC3H11AO75152 810 aaKnown RBP eCLIP18.08■□□□□ 0.48
UBFD1-201ENST00000395878 APOA4P06727 396 aa18.08■□□□□ 0.48
UBFD1-201ENST00000395878 FAM200BP0CF97 657 aa18.08■□□□□ 0.48
UBFD1-201ENST00000395878 CHI3L2Q15782 390 aa18.08■□□□□ 0.48
UBFD1-201ENST00000395878 DGKDQ16760 1214 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms