RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 WHAMMQ8TF30 809 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 SLC20A1Q8WUM9 679 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 NOX5Q96PH1 765 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 SLC9A7Q96T83 725 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 YME1L1Q96TA2 773 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 ADAM28Q9UKQ2 775 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 PCDHB8Q9UN66 801 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 REXO2Q9Y3B8 237 aaKnown RBP14.55□□□□□ -0.08
VAPB-202ENST00000395802 SF3B1O75533 1304 aaKnown RBP eCLIP14.55□□□□□ -0.088e-6■■■■■ 107
VAPB-202ENST00000395802 NRP1O14786 923 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 SLC8A3P57103 927 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 SNX16P57768 344 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 BTG3Q14201 252 aaPredicted RBP14.55□□□□□ -0.08
VAPB-202ENST00000395802 MAPRE1Q15691 268 aaKnown RBP14.55□□□□□ -0.08
VAPB-202ENST00000395802 CNGA2Q16280 664 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 WSCD1Q658N2 575 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 LNX1Q8TBB1 728 aaPredicted RBP14.55□□□□□ -0.08
VAPB-202ENST00000395802 KBTBD7Q8WVZ9 684 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 CTNNBL1Q8WYA6 563 aaPredicted RBP14.55□□□□□ -0.08
VAPB-202ENST00000395802 ZNF689Q96CS4 500 aaPredicted RBP14.55□□□□□ -0.08
VAPB-202ENST00000395802 OXCT2Q9BYC2 517 aaPredicted RBP14.55□□□□□ -0.08
VAPB-202ENST00000395802 ELOVL4Q9GZR5 314 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 MIS12Q9H081 205 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 LHX5Q9H2C1 402 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 ACP6Q9NPH0 428 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 AAASQ9NRG9 546 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 DDX43Q9NXZ2 648 aaKnown RBP14.55□□□□□ -0.08
VAPB-202ENST00000395802 PRG3Q9Y2Y8 225 aaPredicted RBP14.55□□□□□ -0.08
VAPB-202ENST00000395802 A0A0U1RQJ8 604 aa14.54□□□□□ -0.08
VAPB-202ENST00000395802 ANKRD62A6NC57 917 aa14.54□□□□□ -0.08
VAPB-202ENST00000395802 CHRNB2P17787 502 aa14.54□□□□□ -0.08
VAPB-202ENST00000395802 LAG3P18627 525 aa14.54□□□□□ -0.08
VAPB-202ENST00000395802 YWHAHQ04917 246 aaPredicted RBP14.54□□□□□ -0.08
VAPB-202ENST00000395802 IFI16Q16666 785 aaKnown RBP14.54□□□□□ -0.08
VAPB-202ENST00000395802 SPOUT1Q5T280 376 aaKnown RBP14.54□□□□□ -0.08
VAPB-202ENST00000395802 COL13A1Q5TAT6 717 aaPredicted RBP14.54□□□□□ -0.08
VAPB-202ENST00000395802 ATRIPQ8WXE1 791 aa14.54□□□□□ -0.08
VAPB-202ENST00000395802 HERVK_113Q902F9 699 aa14.54□□□□□ -0.08
VAPB-202ENST00000395802 VCPIP1Q96JH7 1222 aa14.54□□□□□ -0.08
VAPB-202ENST00000395802 ACBD6Q9BR61 282 aa14.54□□□□□ -0.08
VAPB-202ENST00000395802 ZBED2Q9BTP6 218 aa14.54□□□□□ -0.08
VAPB-202ENST00000395802 ISCUQ9H1K1 167 aa14.54□□□□□ -0.08
VAPB-202ENST00000395802 MYO1AQ9UBC5 1043 aa14.54□□□□□ -0.08
VAPB-202ENST00000395802 HESX1Q9UBX0 185 aa14.54□□□□□ -0.08
VAPB-202ENST00000395802 DNAJB4Q9UDY4 337 aa14.54□□□□□ -0.08
VAPB-202ENST00000395802 CDH9Q9ULB4 789 aa14.54□□□□□ -0.08
VAPB-202ENST00000395802 INSL6Q9Y581 213 aa14.54□□□□□ -0.08
VAPB-202ENST00000395802 SLC4A7Q9Y6M7 1214 aa14.54□□□□□ -0.08
VAPB-202ENST00000395802 ZNF263O14978 683 aa14.53□□□□□ -0.08
VAPB-202ENST00000395802 PJA2O43164 708 aa14.53□□□□□ -0.08
VAPB-202ENST00000395802 KIF5CO60282 957 aa14.53□□□□□ -0.08
VAPB-202ENST00000395802 CYP1A1P04798 512 aaPredicted RBP14.53□□□□□ -0.08
VAPB-202ENST00000395802 GALTP07902 379 aa14.53□□□□□ -0.08
VAPB-202ENST00000395802 MYBL1P10243 752 aa14.53□□□□□ -0.08
VAPB-202ENST00000395802 BCAR1P56945 870 aa14.53□□□□□ -0.08
VAPB-202ENST00000395802 DEFB103AP81534 67 aa14.53□□□□□ -0.08
VAPB-202ENST00000395802 CENPCQ03188 943 aa14.53□□□□□ -0.08
VAPB-202ENST00000395802 CLEC16AQ2KHT3 1053 aa14.53□□□□□ -0.08
VAPB-202ENST00000395802 PAN2Q504Q3 1202 aaKnown RBP14.53□□□□□ -0.08
VAPB-202ENST00000395802 TMEM240Q5SV17 173 aa14.53□□□□□ -0.08
VAPB-202ENST00000395802 OVOS1Q6IE37 1185 aa14.53□□□□□ -0.08
VAPB-202ENST00000395802 ACAD10Q6JQN1 1059 aa14.53□□□□□ -0.08
VAPB-202ENST00000395802 C16orf59Q7L2K0 433 aa14.53□□□□□ -0.08
VAPB-202ENST00000395802 RNF10Q8N5U6 811 aaKnown RBP14.53□□□□□ -0.08
VAPB-202ENST00000395802 HASPINQ8TF76 798 aa14.53□□□□□ -0.08
VAPB-202ENST00000395802 LZTFL1Q9NQ48 299 aa14.53□□□□□ -0.08
VAPB-202ENST00000395802 CACNG4Q9UBN1 327 aa14.53□□□□□ -0.08
VAPB-202ENST00000395802 BTNL10A8MVZ5 291 aa14.52□□□□□ -0.08
VAPB-202ENST00000395802 GJB5O95377 273 aa14.52□□□□□ -0.08
VAPB-202ENST00000395802 FTLP02792 175 aaPredicted RBP14.52□□□□□ -0.08
VAPB-202ENST00000395802 PDGFRBP09619 1106 aa14.52□□□□□ -0.08
VAPB-202ENST00000395802 TMEM253P0C7T8 217 aa14.52□□□□□ -0.08
VAPB-202ENST00000395802 UNGP13051 313 aaPredicted RBP14.52□□□□□ -0.08
VAPB-202ENST00000395802 BRD2P25440 801 aaKnown RBP14.52□□□□□ -0.08
VAPB-202ENST00000395802 PPM1AP35813 382 aa14.52□□□□□ -0.08
VAPB-202ENST00000395802 SLC11A1P49279 550 aa14.52□□□□□ -0.08
VAPB-202ENST00000395802 GATMP50440 423 aa14.52□□□□□ -0.08
VAPB-202ENST00000395802 ETF1P62495 437 aaKnown RBP14.52□□□□□ -0.08
VAPB-202ENST00000395802 TSPY1Q01534 308 aa14.52□□□□□ -0.08
VAPB-202ENST00000395802 ARHGAP17Q68EM7 881 aa14.52□□□□□ -0.08
VAPB-202ENST00000395802 LCLAT1Q6UWP7 414 aa14.52□□□□□ -0.08
VAPB-202ENST00000395802 ACOT1Q86TX2 421 aa14.52□□□□□ -0.08
VAPB-202ENST00000395802 B3GALNT2Q8NCR0 500 aa14.52□□□□□ -0.08
VAPB-202ENST00000395802 RABGGTAQ92696 567 aa14.52□□□□□ -0.08
VAPB-202ENST00000395802 TWNKQ96RR1 684 aa14.52□□□□□ -0.08
VAPB-202ENST00000395802 RC3H2Q9HBD1 1191 aaKnown RBP14.52□□□□□ -0.08
VAPB-202ENST00000395802 HMGXB4Q9UGU5 601 aa14.52□□□□□ -0.08
VAPB-202ENST00000395802 NENFQ9UMX5 172 aa14.52□□□□□ -0.08
VAPB-202ENST00000395802 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.52□□□□□ -0.08
VAPB-202ENST00000395802 FNDC1Q4ZHG4 1894 aaPredicted RBP14.52□□□□□ -0.09
VAPB-202ENST00000395802 TMCO5BA8MYB1 307 aa14.52□□□□□ -0.09
VAPB-202ENST00000395802 O00370 1275 aa14.52□□□□□ -0.09
VAPB-202ENST00000395802 SYN1P17600 705 aa14.52□□□□□ -0.09
VAPB-202ENST00000395802 CDH5P33151 784 aaPredicted RBP14.52□□□□□ -0.09
VAPB-202ENST00000395802 BRCC3P46736 316 aa14.52□□□□□ -0.09
VAPB-202ENST00000395802 CD300LGQ6UXG3 332 aa14.52□□□□□ -0.09
VAPB-202ENST00000395802 RHOT2Q8IXI1 618 aa14.52□□□□□ -0.09
VAPB-202ENST00000395802 CYFIP2Q96F07 1278 aa14.52□□□□□ -0.09
VAPB-202ENST00000395802 ZNF558Q96NG5 402 aa14.52□□□□□ -0.09
VAPB-202ENST00000395802 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms