RNA–Protein interactions for RNA: ENST00000395601.7

SNTB1-201, Transcript of syntrophin beta 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNTB1, Length 5,164 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-201ENST00000395601 SLC35C1Q96A29 364 aa18.59■□□□□ 0.57
SNTB1-201ENST00000395601 PCDHB5Q9Y5E4 795 aa18.59■□□□□ 0.57
SNTB1-201ENST00000395601 EXOC1LA0A1B0GW35 172 aa18.59■□□□□ 0.57
SNTB1-201ENST00000395601 GOLGA8KD6RF30 607 aa18.59■□□□□ 0.57
SNTB1-201ENST00000395601 RIN2Q8WYP3 895 aaPredicted RBP18.59■□□□□ 0.57
SNTB1-201ENST00000395601 DUSP9Q99956 384 aaKnown RBP18.59■□□□□ 0.57
SNTB1-201ENST00000395601 KRT14P02533 472 aa18.58■□□□□ 0.57
SNTB1-201ENST00000395601 SLC2A3P11169 496 aa18.58■□□□□ 0.57
SNTB1-201ENST00000395601 MX2P20592 715 aa18.58■□□□□ 0.57
SNTB1-201ENST00000395601 CCDC137Q6PK04 289 aaKnown RBP18.58■□□□□ 0.57
SNTB1-201ENST00000395601 ACO2Q99798 780 aaKnown RBP18.58■□□□□ 0.57
SNTB1-201ENST00000395601 MAGEB5Q9BZ81 275 aa18.58■□□□□ 0.57
SNTB1-201ENST00000395601 CDT1Q9H211 546 aa18.58■□□□□ 0.57
SNTB1-201ENST00000395601 C5P01031 1676 aa18.58■□□□□ 0.57
SNTB1-201ENST00000395601 SNED1Q8TER0 1413 aa18.58■□□□□ 0.57
SNTB1-201ENST00000395601 ZNF189O75820 626 aaPredicted RBP18.58■□□□□ 0.57
SNTB1-201ENST00000395601 RTP1P59025 263 aa18.58■□□□□ 0.57
SNTB1-201ENST00000395601 C4orf32Q8N8J7 132 aa18.58■□□□□ 0.57
SNTB1-201ENST00000395601 GLIS3Q8NEA6 775 aa18.58■□□□□ 0.57
SNTB1-201ENST00000395601 WHAMMQ8TF30 809 aa18.58■□□□□ 0.57
SNTB1-201ENST00000395601 CATSPERBQ9H7T0 1116 aa18.58■□□□□ 0.57
SNTB1-201ENST00000395601 ANGPTL3Q9Y5C1 460 aa18.58■□□□□ 0.57
SNTB1-201ENST00000395601 F8VZ95 297 aa18.58■□□□□ 0.56
SNTB1-201ENST00000395601 COMTP21964 271 aa18.58■□□□□ 0.56
SNTB1-201ENST00000395601 OAS2P29728 719 aaKnown RBP18.58■□□□□ 0.56
SNTB1-201ENST00000395601 TMED2Q15363 201 aa18.58■□□□□ 0.56
SNTB1-201ENST00000395601 ATPAF2Q8N5M1 289 aa18.58■□□□□ 0.56
SNTB1-201ENST00000395601 ATP6V0D2Q8N8Y2 350 aa18.58■□□□□ 0.56
SNTB1-201ENST00000395601 MTMR8Q96EF0 704 aa18.58■□□□□ 0.56
SNTB1-201ENST00000395601 ZNF518BQ9C0D4 1074 aa18.58■□□□□ 0.56
SNTB1-201ENST00000395601 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.58■□□□□ 0.563e-6■□□□□ 10.3
SNTB1-201ENST00000395601 NFU1Q9UMS0 254 aa18.58■□□□□ 0.56
SNTB1-201ENST00000395601 MBL2P11226 248 aaPredicted RBP18.58■□□□□ 0.56
SNTB1-201ENST00000395601 CCL14Q16627 93 aa18.58■□□□□ 0.56
SNTB1-201ENST00000395601 FIGNQ5HY92 759 aa18.58■□□□□ 0.56
SNTB1-201ENST00000395601 RMDN1Q96DB5 314 aa18.58■□□□□ 0.56
SNTB1-201ENST00000395601 DUOX1Q9NRD9 1551 aa18.57■□□□□ 0.56
SNTB1-201ENST00000395601 FAM237AA0A1B0GTK4 181 aa18.57■□□□□ 0.56
SNTB1-201ENST00000395601 HGSO14964 777 aaPredicted RBP18.57■□□□□ 0.56
SNTB1-201ENST00000395601 GMNNO75496 209 aa18.57■□□□□ 0.56
SNTB1-201ENST00000395601 CCZ1BP86790 482 aa18.57■□□□□ 0.56
SNTB1-201ENST00000395601 CCZ1P86791 482 aaPredicted RBP18.57■□□□□ 0.56
SNTB1-201ENST00000395601 ECM1Q16610 540 aa18.57■□□□□ 0.56
SNTB1-201ENST00000395601 PABPC5Q96DU9 382 aaKnown RBP18.57■□□□□ 0.56
SNTB1-201ENST00000395601 BFARQ9NZS9 450 aa18.57■□□□□ 0.56
SNTB1-201ENST00000395601 PLEKP08567 350 aaPredicted RBP18.57■□□□□ 0.56
SNTB1-201ENST00000395601 SLC11A2P49281 568 aa18.57■□□□□ 0.56
SNTB1-201ENST00000395601 BST2Q10589 180 aaKnown RBP18.57■□□□□ 0.56
SNTB1-201ENST00000395601 USP38Q8NB14 1042 aa18.57■□□□□ 0.56
SNTB1-201ENST00000395601 RILPQ96NA2 401 aa18.57■□□□□ 0.56
SNTB1-201ENST00000395601 EMILIN2Q9BXX0 1053 aa18.57■□□□□ 0.56
SNTB1-201ENST00000395601 WDCPQ9H6R7 721 aa18.57■□□□□ 0.56
SNTB1-201ENST00000395601 LAMB4A4D0S4 1761 aa18.57■□□□□ 0.56
SNTB1-201ENST00000395601 C2CD6Q53TS8 623 aa18.57■□□□□ 0.56
SNTB1-201ENST00000395601 RAB44Q7Z6P3 723 aaPredicted RBP18.57■□□□□ 0.56
SNTB1-201ENST00000395601 VPS39Q96JC1 886 aa18.57■□□□□ 0.56
SNTB1-201ENST00000395601 TRIM56Q9BRZ2 755 aaKnown RBP18.57■□□□□ 0.56
SNTB1-201ENST00000395601 THAP2Q9H0W7 228 aa18.57■□□□□ 0.56
SNTB1-201ENST00000395601 SRRDQ9UH36 339 aa18.57■□□□□ 0.56
SNTB1-201ENST00000395601 MT-ND3P03897 115 aa18.57■□□□□ 0.56
SNTB1-201ENST00000395601 SMTNL2Q2TAL5 461 aa18.57■□□□□ 0.56
SNTB1-201ENST00000395601 MCUQ8NE86 351 aa18.57■□□□□ 0.56
SNTB1-201ENST00000395601 IRX2Q9BZI1 471 aaPredicted RBP18.57■□□□□ 0.56
SNTB1-201ENST00000395601 TXNRD2Q9NNW7 524 aa18.57■□□□□ 0.56
SNTB1-201ENST00000395601 ALG6Q9Y672 507 aa18.57■□□□□ 0.56
SNTB1-201ENST00000395601 A0A087X0T9 212 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 FBXO21O94952 628 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 FAM228BP0C875 321 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 CLK2P49760 499 aaKnown RBP18.56■□□□□ 0.56
SNTB1-201ENST00000395601 SLC47A2Q86VL8 602 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 RABEP2Q9H5N1 569 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 BTAF1O14981 1849 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 IGLV3-22A0A075B6J6 115 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 TREHO43280 583 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 B4GALT5O43286 388 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 CAPN15O75808 1086 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 ACSL3O95573 720 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 RPS6KA2Q15349 733 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 ELMO3Q96BJ8 720 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 ZNF558Q96NG5 402 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 PGLYRP2Q96PD5 576 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 TSPYL2Q9H2G4 693 aaPredicted RBP18.56■□□□□ 0.56
SNTB1-201ENST00000395601 INTUQ9ULD6 942 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 SLCO1A2P46721 670 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 MDM2Q00987 491 aaPredicted RBP18.56■□□□□ 0.56
SNTB1-201ENST00000395601 SF3A3Q12874 501 aaKnown RBP eCLIP18.56■□□□□ 0.561e-11■■□□□ 13.6
SNTB1-201ENST00000395601 NOMO2Q5JPE7 1267 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 HYIQ5T013 277 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 ITIH5Q86UX2 942 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 PARD6BQ9BYG5 372 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 TRIM10Q9UDY6 481 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 TBK1Q9UHD2 729 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 CARNS1A5YM72 827 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 KCNN4O15554 427 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 TROVE2P10155 538 aaKnown RBP eCLIP18.56■□□□□ 0.565e-6■■□□□ 12.5
SNTB1-201ENST00000395601 KPNA2P52292 529 aaKnown RBP18.56■□□□□ 0.56
SNTB1-201ENST00000395601 CAV1Q03135 178 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 MYLK4Q86YV6 388 aaPredicted RBP18.56■□□□□ 0.56
SNTB1-201ENST00000395601 HELQQ8TDG4 1101 aa18.56■□□□□ 0.56
SNTB1-201ENST00000395601 LPPQ93052 612 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms