RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 C11orf63Q6NUN7 778 aa20.53■□□□□ 0.88
LMNB1-202ENST00000395354 PEX26Q7Z412 305 aa20.53■□□□□ 0.88
LMNB1-202ENST00000395354 MSANTD4Q8NCY6 345 aa20.53■□□□□ 0.88
LMNB1-202ENST00000395354 CXorf38Q8TB03 319 aa20.53■□□□□ 0.88
LMNB1-202ENST00000395354 TSPAN18Q96SJ8 248 aa20.53■□□□□ 0.88
LMNB1-202ENST00000395354 OSGEPQ9NPF4 335 aa20.53■□□□□ 0.88
LMNB1-202ENST00000395354 RNF19AQ9NV58 838 aa20.53■□□□□ 0.88
LMNB1-202ENST00000395354 ARGLU1Q9NWB6 273 aaPredicted RBP20.53■□□□□ 0.88
LMNB1-202ENST00000395354 UVRAGQ9P2Y5 699 aa20.53■□□□□ 0.88
LMNB1-202ENST00000395354 TRIP11Q15643 1979 aa20.53■□□□□ 0.88
LMNB1-202ENST00000395354 BUB1BO60566 1050 aaPredicted RBP20.52■□□□□ 0.88
LMNB1-202ENST00000395354 ASPAP45381 313 aa20.52■□□□□ 0.88
LMNB1-202ENST00000395354 AFF1P51825 1210 aaKnown RBP20.52■□□□□ 0.88
LMNB1-202ENST00000395354 CFAP221Q4G0U5 840 aa20.52■□□□□ 0.88
LMNB1-202ENST00000395354 ZNF667Q5HYK9 610 aa20.52■□□□□ 0.88
LMNB1-202ENST00000395354 CCDC181Q5TID7 509 aa20.52■□□□□ 0.88
LMNB1-202ENST00000395354 RASIP1Q5U651 963 aa20.52■□□□□ 0.88
LMNB1-202ENST00000395354 NT5DC3Q86UY8 548 aa20.52■□□□□ 0.88
LMNB1-202ENST00000395354 ABI1Q8IZP0 508 aa20.52■□□□□ 0.88
LMNB1-202ENST00000395354 PDCL2Q8N4E4 241 aa20.52■□□□□ 0.88
LMNB1-202ENST00000395354 GSTCDQ8NEC7 633 aa20.52■□□□□ 0.88
LMNB1-202ENST00000395354 BCO2Q9BYV7 579 aa20.52■□□□□ 0.88
LMNB1-202ENST00000395354 CISHQ9NSE2 258 aa20.52■□□□□ 0.88
LMNB1-202ENST00000395354 CNTN3Q9P232 1028 aa20.52■□□□□ 0.88
LMNB1-202ENST00000395354 CTTNBP2NLQ9P2B4 639 aa20.52■□□□□ 0.88
LMNB1-202ENST00000395354 AMFRQ9UKV5 643 aa20.52■□□□□ 0.88
LMNB1-202ENST00000395354 INPP5FQ9Y2H2 1132 aa20.52■□□□□ 0.88
LMNB1-202ENST00000395354 SMIM28A0A1B0GU29 152 aa20.51■□□□□ 0.87
LMNB1-202ENST00000395354 PDE2AO00408 941 aaPredicted RBP20.51■□□□□ 0.87
LMNB1-202ENST00000395354 DGKIO75912 1065 aa20.51■□□□□ 0.87
LMNB1-202ENST00000395354 P4HA1P13674 534 aa20.51■□□□□ 0.87
LMNB1-202ENST00000395354 CENPCQ03188 943 aa20.51■□□□□ 0.87
LMNB1-202ENST00000395354 SCARA3Q6AZY7 606 aa20.51■□□□□ 0.87
LMNB1-202ENST00000395354 PHOSPHO2Q8TCD6 241 aa20.51■□□□□ 0.87
LMNB1-202ENST00000395354 VCPIP1Q96JH7 1222 aa20.51■□□□□ 0.87
LMNB1-202ENST00000395354 RNPC3Q96LT9 517 aaKnown RBP20.51■□□□□ 0.87
LMNB1-202ENST00000395354 RPS6KC1Q96S38 1066 aa20.51■□□□□ 0.87
LMNB1-202ENST00000395354 CYP3A43Q9HB55 503 aa20.51■□□□□ 0.87
LMNB1-202ENST00000395354 AVENQ9NQS1 362 aaPredicted RBP20.51■□□□□ 0.87
LMNB1-202ENST00000395354 MIOSQ9NXC5 875 aa20.51■□□□□ 0.87
LMNB1-202ENST00000395354 KRT19P08727 400 aa20.51■□□□□ 0.87
LMNB1-202ENST00000395354 KCNE1P15382 129 aa20.51■□□□□ 0.87
LMNB1-202ENST00000395354 ATP2A2P16615 1042 aaKnown RBP20.51■□□□□ 0.87
LMNB1-202ENST00000395354 GATMP50440 423 aa20.51■□□□□ 0.87
LMNB1-202ENST00000395354 RBP5P82980 135 aa20.51■□□□□ 0.87
LMNB1-202ENST00000395354 NOMO2Q5JPE7 1267 aa20.51■□□□□ 0.87
LMNB1-202ENST00000395354 GLRA4Q5JXX5 417 aa20.51■□□□□ 0.87
LMNB1-202ENST00000395354 HES6Q96HZ4 224 aa20.51■□□□□ 0.87
LMNB1-202ENST00000395354 ZMAT2Q96NC0 199 aaKnown RBP20.51■□□□□ 0.87
LMNB1-202ENST00000395354 SLC9A7Q96T83 725 aa20.51■□□□□ 0.87
LMNB1-202ENST00000395354 SELENOOQ9BVL4 669 aa20.51■□□□□ 0.87
LMNB1-202ENST00000395354 PDCL3Q9H2J4 239 aa20.51■□□□□ 0.87
LMNB1-202ENST00000395354 COG5Q9UP83 839 aa20.51■□□□□ 0.87
LMNB1-202ENST00000395354 PTGESO14684 152 aa20.5■□□□□ 0.87
LMNB1-202ENST00000395354 INPPL1O15357 1258 aa20.5■□□□□ 0.87
LMNB1-202ENST00000395354 TNRC18O15417 2968 aaPredicted RBP20.5■□□□□ 0.87
LMNB1-202ENST00000395354 POMCP01189 267 aa20.5■□□□□ 0.87
LMNB1-202ENST00000395354 ITGB3P05106 788 aa20.5■□□□□ 0.87
LMNB1-202ENST00000395354 SCNN1GP51170 649 aa20.5■□□□□ 0.87
LMNB1-202ENST00000395354 MCOLN2Q8IZK6 566 aa20.5■□□□□ 0.87
LMNB1-202ENST00000395354 MMGT1Q8N4V1 131 aa20.5■□□□□ 0.87
LMNB1-202ENST00000395354 TTC39CQ8N584 583 aa20.5■□□□□ 0.87
LMNB1-202ENST00000395354 URGCPQ8TCY9 931 aa20.5■□□□□ 0.87
LMNB1-202ENST00000395354 ZNF653Q96CK0 615 aa20.5■□□□□ 0.87
LMNB1-202ENST00000395354 KIF12Q96FN5 646 aa20.5■□□□□ 0.87
LMNB1-202ENST00000395354 CASD1Q96PB1 797 aa20.5■□□□□ 0.87
LMNB1-202ENST00000395354 ZBED2Q9BTP6 218 aa20.5■□□□□ 0.87
LMNB1-202ENST00000395354 DPP3Q9NY33 737 aa20.5■□□□□ 0.87
LMNB1-202ENST00000395354 KANSL3Q9P2N6 904 aa20.5■□□□□ 0.87
LMNB1-202ENST00000395354 TBKBP1A7MCY6 615 aa20.49■□□□□ 0.87
LMNB1-202ENST00000395354 THAP12O43422 761 aa20.49■□□□□ 0.87
LMNB1-202ENST00000395354 GJB5O95377 273 aa20.49■□□□□ 0.87
LMNB1-202ENST00000395354 LSM8O95777 96 aaKnown RBP20.49■□□□□ 0.87
LMNB1-202ENST00000395354 THP07101 528 aa20.49■□□□□ 0.87
LMNB1-202ENST00000395354 CXCR5P32302 372 aa20.49■□□□□ 0.87
LMNB1-202ENST00000395354 BMP8BP34820 402 aa20.49■□□□□ 0.87
LMNB1-202ENST00000395354 NSFP46459 744 aaKnown RBP20.49■□□□□ 0.87
LMNB1-202ENST00000395354 FBXO38Q6PIJ6 1188 aa20.49■□□□□ 0.87
LMNB1-202ENST00000395354 HERC6Q8IVU3 1022 aa20.49■□□□□ 0.87
LMNB1-202ENST00000395354 NOA1Q8NC60 698 aaKnown RBP20.49■□□□□ 0.87
LMNB1-202ENST00000395354 ZNF606Q8WXB4 792 aa20.49■□□□□ 0.87
LMNB1-202ENST00000395354 PARD6BQ9BYG5 372 aa20.49■□□□□ 0.87
LMNB1-202ENST00000395354 ANKZF1Q9H8Y5 726 aa20.49■□□□□ 0.87
LMNB1-202ENST00000395354 RALGAPA2Q2PPJ7 1873 aa20.49■□□□□ 0.87
LMNB1-202ENST00000395354 MIF4GDA9UHW6 222 aaKnown RBP20.48■□□□□ 0.87
LMNB1-202ENST00000395354 PAEPP09466 180 aa20.48■□□□□ 0.87
LMNB1-202ENST00000395354 NOMO3P69849 1222 aa20.48■□□□□ 0.87
LMNB1-202ENST00000395354 ZBTB6Q15916 424 aa20.48■□□□□ 0.87
LMNB1-202ENST00000395354 WDR72Q3MJ13 1102 aa20.48■□□□□ 0.87
LMNB1-202ENST00000395354 PHF13Q86YI8 300 aaPredicted RBP20.48■□□□□ 0.87
LMNB1-202ENST00000395354 SPATA4Q8NEY3 305 aa20.48■□□□□ 0.87
LMNB1-202ENST00000395354 RSPH1Q8WYR4 309 aa20.48■□□□□ 0.87
LMNB1-202ENST00000395354 ZNF689Q96CS4 500 aaPredicted RBP20.48■□□□□ 0.87
LMNB1-202ENST00000395354 PPP1R10Q96QC0 940 aaKnown RBP20.48■□□□□ 0.87
LMNB1-202ENST00000395354 PSMB7Q99436 277 aa20.48■□□□□ 0.87
LMNB1-202ENST00000395354 ZNF518BQ9C0D4 1074 aa20.48■□□□□ 0.87
LMNB1-202ENST00000395354 RAB21Q9UL25 225 aa20.48■□□□□ 0.87
LMNB1-202ENST00000395354 PACSIN2Q9UNF0 486 aaPredicted RBP20.48■□□□□ 0.87
LMNB1-202ENST00000395354 TARSL2A2RTX5 802 aaKnown RBP20.47■□□□□ 0.87
LMNB1-202ENST00000395354 KCNK3O14649 394 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms