RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 KHSRPQ92945 711 aaKnown RBP eCLIP15.05■□□□□ -06e-7■■□□□ 11.6
CDC42SE2-202ENST00000395246 MIS12Q9H081 205 aa15.05■□□□□ -0
CDC42SE2-202ENST00000395246 NFS1Q9Y697 457 aa15.05■□□□□ -0
CDC42SE2-202ENST00000395246 SART1O43290 800 aaKnown RBP15.04■□□□□ -0
CDC42SE2-202ENST00000395246 PYGMP11217 842 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 RBM10P98175 930 aaKnown RBP15.04■□□□□ -0
CDC42SE2-202ENST00000395246 CASKIN2Q8WXE0 1202 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 KCTD13Q8WZ19 329 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 PKMYT1Q99640 499 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 TMEM109Q9BVC6 243 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 POLIQ9UNA4 740 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 SMIM28A0A1B0GU29 152 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 PODXLO00592 558 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 PTGESO14684 152 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 NAA35Q5VZE5 725 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 GDF6Q6KF10 455 aaPredicted RBP15.04■□□□□ -0
CDC42SE2-202ENST00000395246 C8orf74Q6P047 294 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 MAATS1Q7Z4T9 603 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 ZNF598Q86UK7 904 aaKnown RBP15.04■□□□□ -0
CDC42SE2-202ENST00000395246 THNSL1Q8IYQ7 743 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 ARFGAP1Q8N6T3 406 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 BEST2Q8NFU1 509 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 NT5C3BQ969T7 300 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 FAF2Q96CS3 445 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 NCAPGQ9BPX3 1015 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 DDX56Q9NY93 547 aaKnown RBP15.04■□□□□ -0
CDC42SE2-202ENST00000395246 EHD2Q9NZN4 543 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 ADAM22Q9P0K1 906 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 IPPQ9Y573 584 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 PPFIA2O75334 1257 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 COL6A1P12109 1028 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 CXCR5P32302 372 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 NOP2P46087 812 aaKnown RBP15.04■□□□□ -0
CDC42SE2-202ENST00000395246 PTPN20Q4JDL3 420 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 RHOT1Q8IXI2 618 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 SMYD3Q9H7B4 428 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 FAM114A2Q9NRY5 505 aa15.04■□□□□ -0
CDC42SE2-202ENST00000395246 DRG1Q9Y295 367 aaKnown RBP15.04■□□□□ -0
CDC42SE2-202ENST00000395246 TMEM189-UBE2V1I3L0A0 370 aa15.03■□□□□ -0
CDC42SE2-202ENST00000395246 XPOTO43592 962 aaKnown RBP15.03■□□□□ -0
CDC42SE2-202ENST00000395246 SYF2O95926 243 aaKnown RBP15.03■□□□□ -0
CDC42SE2-202ENST00000395246 KRT5P13647 590 aa15.03■□□□□ -0
CDC42SE2-202ENST00000395246 IVDP26440 423 aa15.03■□□□□ -0
CDC42SE2-202ENST00000395246 PSMC4P43686 418 aa15.03■□□□□ -0
CDC42SE2-202ENST00000395246 TNFAIP8L3Q5GJ75 292 aa15.03■□□□□ -0
CDC42SE2-202ENST00000395246 CCDC181Q5TID7 509 aa15.03■□□□□ -0
CDC42SE2-202ENST00000395246 LHX8Q68G74 356 aa15.03■□□□□ -0
CDC42SE2-202ENST00000395246 BEND5Q7L4P6 421 aa15.03■□□□□ -0
CDC42SE2-202ENST00000395246 DNAJB3Q8WWF6 145 aa15.03■□□□□ -0
CDC42SE2-202ENST00000395246 CAPZA3Q96KX2 299 aa15.03■□□□□ -0
CDC42SE2-202ENST00000395246 UBN1Q9NPG3 1134 aa15.03■□□□□ -0
CDC42SE2-202ENST00000395246 PHF24Q9UPV7 400 aa15.03■□□□□ -0
CDC42SE2-202ENST00000395246 GREB1Q4ZG55 1949 aa15.03■□□□□ -0
CDC42SE2-202ENST00000395246 RPL9P32969 192 aaKnown RBP15.03■□□□□ -0
CDC42SE2-202ENST00000395246 MYO1EQ12965 1108 aa15.03■□□□□ -0
CDC42SE2-202ENST00000395246 KIZQ2M2Z5 673 aa15.03■□□□□ -0
CDC42SE2-202ENST00000395246 SOWAHAQ2M3V2 549 aa15.03■□□□□ -0
CDC42SE2-202ENST00000395246 RCOR2Q8IZ40 523 aa15.03■□□□□ -0
CDC42SE2-202ENST00000395246 PCSK9Q8NBP7 692 aaKnown RBP15.03■□□□□ -0
CDC42SE2-202ENST00000395246 CMASQ8NFW8 434 aaPredicted RBP15.03■□□□□ -0
CDC42SE2-202ENST00000395246 TEKT4Q8WW24 435 aa15.03■□□□□ -0
CDC42SE2-202ENST00000395246 FAM84AQ96KN4 292 aa15.03■□□□□ -0
CDC42SE2-202ENST00000395246 CXCL16Q9H2A7 254 aa15.03■□□□□ -0
CDC42SE2-202ENST00000395246 GRHL1Q9NZI5 618 aa15.03■□□□□ -0
CDC42SE2-202ENST00000395246 DCAF8L1A6NGE4 600 aa15.02■□□□□ -0
CDC42SE2-202ENST00000395246 THAP12O43422 761 aa15.02■□□□□ -0
CDC42SE2-202ENST00000395246 PHACTR2O75167 634 aa15.02■□□□□ -0
CDC42SE2-202ENST00000395246 MICAL2O94851 1124 aa15.02■□□□□ -0
CDC42SE2-202ENST00000395246 EFEMP2O95967 443 aa15.02■□□□□ -0
CDC42SE2-202ENST00000395246 ABCB4P21439 1286 aa15.02■□□□□ -0
CDC42SE2-202ENST00000395246 POLR2BP30876 1174 aaKnown RBP15.02■□□□□ -0
CDC42SE2-202ENST00000395246 CDK7P50613 346 aa15.02■□□□□ -0
CDC42SE2-202ENST00000395246 TFAMQ00059 246 aaKnown RBP15.02■□□□□ -0
CDC42SE2-202ENST00000395246 OGDHQ02218 1023 aa15.02■□□□□ -0
CDC42SE2-202ENST00000395246 CCNG2Q16589 344 aa15.02■□□□□ -0
CDC42SE2-202ENST00000395246 DENND1BQ6P3S1 775 aa15.02■□□□□ -0
CDC42SE2-202ENST00000395246 CD300LGQ6UXG3 332 aa15.02■□□□□ -0
CDC42SE2-202ENST00000395246 CCDC26Q8TAB7 109 aa15.02■□□□□ -0
CDC42SE2-202ENST00000395246 CPA5Q8WXQ8 436 aa15.02■□□□□ -0
CDC42SE2-202ENST00000395246 ZNF560Q96MR9 790 aa15.02■□□□□ -0
CDC42SE2-202ENST00000395246 TMEM51Q9NW97 253 aa15.02■□□□□ -0
CDC42SE2-202ENST00000395246 MARCKSL1P49006 195 aa15.02■□□□□ -0
CDC42SE2-202ENST00000395246 PAK2Q13177 524 aa15.02■□□□□ -0
CDC42SE2-202ENST00000395246 PTK6Q13882 451 aa15.02■□□□□ -0
CDC42SE2-202ENST00000395246 TAF3Q5VWG9 929 aa15.02■□□□□ -0
CDC42SE2-202ENST00000395246 ART4Q93070 314 aa15.02■□□□□ -0
CDC42SE2-202ENST00000395246 ARHGAP39Q9C0H5 1083 aa15.02■□□□□ -0
CDC42SE2-202ENST00000395246 GABBR2O75899 941 aa15.02□□□□□ -0.01
CDC42SE2-202ENST00000395246 FLT3LGP49771 235 aa15.02□□□□□ -0.01
CDC42SE2-202ENST00000395246 PRKCZQ05513 592 aa15.02□□□□□ -0.01
CDC42SE2-202ENST00000395246 NBPF20Q3BBV1 942 aa15.02□□□□□ -0.01
CDC42SE2-202ENST00000395246 ZDHHC24Q6UX98 284 aa15.02□□□□□ -0.01
CDC42SE2-202ENST00000395246 ARRDC4Q8NCT1 418 aa15.02□□□□□ -0.01
CDC42SE2-202ENST00000395246 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.02□□□□□ -0.01
CDC42SE2-202ENST00000395246 WNT8BQ93098 351 aa15.02□□□□□ -0.01
CDC42SE2-202ENST00000395246 ERP44Q9BS26 406 aa15.02□□□□□ -0.01
CDC42SE2-202ENST00000395246 PLVAPQ9BX97 442 aa15.02□□□□□ -0.01
CDC42SE2-202ENST00000395246 GOLPH3Q9H4A6 298 aa15.02□□□□□ -0.01
CDC42SE2-202ENST00000395246 SNTG2Q9NY99 539 aa15.02□□□□□ -0.01
CDC42SE2-202ENST00000395246 DDX20Q9UHI6 824 aaKnown RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms