RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 CDC25CP30307 473 aa17.17■□□□□ 0.34
SNCA-205ENST00000394991 MATR3P43243 847 aaKnown RBP eCLIP17.17■□□□□ 0.34
SNCA-205ENST00000394991 LILRA4P59901 499 aa17.17■□□□□ 0.34
SNCA-205ENST00000394991 PPP2R3AQ06190 1150 aa17.17■□□□□ 0.34
SNCA-205ENST00000394991 GRSF1Q12849 480 aaKnown RBP eCLIP17.17■□□□□ 0.34
SNCA-205ENST00000394991 RUNX3Q13761 415 aa17.17■□□□□ 0.34
SNCA-205ENST00000394991 ENOX2Q16206 610 aaKnown RBP17.17■□□□□ 0.34
SNCA-205ENST00000394991 IL17AQ16552 155 aa17.17■□□□□ 0.34
SNCA-205ENST00000394991 UNQ6494/PRO21346Q6UXR6 183 aa17.17■□□□□ 0.34
SNCA-205ENST00000394991 TMEM150AQ86TG1 271 aa17.17■□□□□ 0.34
SNCA-205ENST00000394991 EDEM2Q9BV94 578 aa17.17■□□□□ 0.34
SNCA-205ENST00000394991 TMEM121BQ9BXQ6 578 aaPredicted RBP17.17■□□□□ 0.34
SNCA-205ENST00000394991 THG1LQ9NWX6 298 aaKnown RBP17.17■□□□□ 0.34
SNCA-205ENST00000394991 ZMIZ1Q9ULJ6 1067 aa17.17■□□□□ 0.34
SNCA-205ENST00000394991 WASF3Q9UPY6 502 aa17.17■□□□□ 0.34
SNCA-205ENST00000394991 SPEGQ15772 3267 aa17.17■□□□□ 0.34
SNCA-205ENST00000394991 HELZP42694 1942 aaKnown RBP17.17■□□□□ 0.34
SNCA-205ENST00000394991 ATG13O75143 517 aa17.16■□□□□ 0.34
SNCA-205ENST00000394991 ODC1P11926 461 aa17.16■□□□□ 0.34
SNCA-205ENST00000394991 ARSAP15289 507 aa17.16■□□□□ 0.34
SNCA-205ENST00000394991 U2AF2P26368 475 aaKnown RBP eCLIP17.16■□□□□ 0.34
SNCA-205ENST00000394991 TRAPPC10P48553 1259 aa17.16■□□□□ 0.34
SNCA-205ENST00000394991 NOVA1P51513 510 aaKnown RBP17.16■□□□□ 0.34
SNCA-205ENST00000394991 COL9A2Q14055 689 aaPredicted RBP17.16■□□□□ 0.34
SNCA-205ENST00000394991 VEPH1Q14D04 833 aa17.16■□□□□ 0.34
SNCA-205ENST00000394991 PTPAQ15257 358 aa17.16■□□□□ 0.34
SNCA-205ENST00000394991 MGAT5BQ3V5L5 792 aa17.16■□□□□ 0.34
SNCA-205ENST00000394991 SLC39A12Q504Y0 691 aa17.16■□□□□ 0.34
SNCA-205ENST00000394991 SPATA1Q5VX52 437 aa17.16■□□□□ 0.34
SNCA-205ENST00000394991 KRT79Q5XKE5 535 aa17.16■□□□□ 0.34
SNCA-205ENST00000394991 ARMCX5Q6P1M9 558 aa17.16■□□□□ 0.34
SNCA-205ENST00000394991 CMTM8Q8IZV2 173 aa17.16■□□□□ 0.34
SNCA-205ENST00000394991 CAMKK1Q8N5S9 505 aa17.16■□□□□ 0.34
SNCA-205ENST00000394991 GIPC2Q8TF65 315 aa17.16■□□□□ 0.34
SNCA-205ENST00000394991 EZH1Q92800 747 aaPredicted RBP17.16■□□□□ 0.34
SNCA-205ENST00000394991 USP13Q92995 863 aaPredicted RBP17.16■□□□□ 0.34
SNCA-205ENST00000394991 GCNAQ96QF7 691 aa17.16■□□□□ 0.34
SNCA-205ENST00000394991 TIPINQ9BVW5 301 aa17.16■□□□□ 0.34
SNCA-205ENST00000394991 ZCWPW1Q9H0M4 648 aa17.16■□□□□ 0.34
SNCA-205ENST00000394991 SH2B1Q9NRF2 756 aaPredicted RBP17.16■□□□□ 0.34
SNCA-205ENST00000394991 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.16■□□□□ 0.34
SNCA-205ENST00000394991 STK24Q9Y6E0 443 aa17.16■□□□□ 0.34
SNCA-205ENST00000394991 TNRC6BQ9UPQ9 1833 aaKnown RBP17.16■□□□□ 0.34
SNCA-205ENST00000394991 C4orf47A7E2U8 309 aa17.15■□□□□ 0.34
SNCA-205ENST00000394991 CYP11A1P05108 521 aa17.15■□□□□ 0.34
SNCA-205ENST00000394991 ADRB2P07550 413 aa17.15■□□□□ 0.34
SNCA-205ENST00000394991 SPINK2P20155 84 aa17.15■□□□□ 0.34
SNCA-205ENST00000394991 NMT1P30419 496 aaKnown RBP17.15■□□□□ 0.34
SNCA-205ENST00000394991 TOB1P50616 345 aaPredicted RBP17.15■□□□□ 0.34
SNCA-205ENST00000394991 CREB5Q02930 508 aa17.15■□□□□ 0.34
SNCA-205ENST00000394991 ERICH6BQ5W0A0 696 aa17.15■□□□□ 0.34
SNCA-205ENST00000394991 RAB34Q9BZG1 259 aa17.15■□□□□ 0.34
SNCA-205ENST00000394991 PCDHB6Q9Y5E3 794 aa17.15■□□□□ 0.34
SNCA-205ENST00000394991 PI4KAP42356 2102 aa17.15■□□□□ 0.34
SNCA-205ENST00000394991 ASPMQ8IZT6 3477 aa17.15■□□□□ 0.34
SNCA-205ENST00000394991 BCLAF3A2AJT9 711 aaKnown RBP17.14■□□□□ 0.33
SNCA-205ENST00000394991 XPOTO43592 962 aaKnown RBP17.14■□□□□ 0.33
SNCA-205ENST00000394991 TOP3BO95985 862 aaKnown RBP17.14■□□□□ 0.33
SNCA-205ENST00000394991 F11P03951 625 aa17.14■□□□□ 0.33
SNCA-205ENST00000394991 TUFMP49411 452 aaKnown RBP17.14■□□□□ 0.33
SNCA-205ENST00000394991 GALK1P51570 392 aa17.14■□□□□ 0.33
SNCA-205ENST00000394991 NEK4P51957 841 aa17.14■□□□□ 0.33
SNCA-205ENST00000394991 NCKAP1LP55160 1127 aa17.14■□□□□ 0.33
SNCA-205ENST00000394991 ZNF252P-AS1Q0IIN9 211 aa17.14■□□□□ 0.33
SNCA-205ENST00000394991 FOXC1Q12948 553 aa17.14■□□□□ 0.33
SNCA-205ENST00000394991 C9orf57Q5W0N0 161 aa17.14■□□□□ 0.33
SNCA-205ENST00000394991 JADE1Q6IE81 842 aa17.14■□□□□ 0.33
SNCA-205ENST00000394991 LRRTM3Q86VH5 581 aa17.14■□□□□ 0.33
SNCA-205ENST00000394991 CCDC83Q8IWF9 413 aa17.14■□□□□ 0.33
SNCA-205ENST00000394991 MAB21L3Q8N8X9 362 aa17.14■□□□□ 0.33
SNCA-205ENST00000394991 KDF1Q8NAX2 398 aaPredicted RBP17.14■□□□□ 0.33
SNCA-205ENST00000394991 STKLD1Q8NE28 680 aa17.14■□□□□ 0.33
SNCA-205ENST00000394991 FBXO18Q8NFZ0 1043 aa17.14■□□□□ 0.33
SNCA-205ENST00000394991 BICD1Q96G01 975 aa17.14■□□□□ 0.33
SNCA-205ENST00000394991 PNMA5Q96PV4 448 aa17.14■□□□□ 0.33
SNCA-205ENST00000394991 NOL7Q9UMY1 257 aaKnown RBP17.14■□□□□ 0.33
SNCA-205ENST00000394991 CACNA1EQ15878 2313 aa17.13■□□□□ 0.33
SNCA-205ENST00000394991 NPHP3-ACAD11A0A0J9YXS1 232 aa17.13■□□□□ 0.33
SNCA-205ENST00000394991 LNP1A1A4G5 178 aa17.13■□□□□ 0.33
SNCA-205ENST00000394991 PCNX2A6NKB5 2137 aa17.13■□□□□ 0.33
SNCA-205ENST00000394991 PIRO00625 290 aa17.13■□□□□ 0.33
SNCA-205ENST00000394991 CAVIN2O95810 425 aa17.13■□□□□ 0.33
SNCA-205ENST00000394991 NFICP08651 508 aa17.13■□□□□ 0.33
SNCA-205ENST00000394991 HAPLN1P10915 354 aaPredicted RBP17.13■□□□□ 0.33
SNCA-205ENST00000394991 HMGA1P17096 107 aaKnown RBP17.13■□□□□ 0.33
SNCA-205ENST00000394991 SMTNP53814 917 aa17.13■□□□□ 0.33
SNCA-205ENST00000394991 NLRP12P59046 1061 aa17.13■□□□□ 0.33
SNCA-205ENST00000394991 ELF2Q15723 593 aa17.13■□□□□ 0.33
SNCA-205ENST00000394991 RPLP0P6Q8NHW5 317 aa17.13■□□□□ 0.33
SNCA-205ENST00000394991 RPF1Q9H9Y2 349 aaKnown RBP17.13■□□□□ 0.33
SNCA-205ENST00000394991 TBX20Q9UMR3 447 aa17.13■□□□□ 0.33
SNCA-205ENST00000394991 GON4LQ3T8J9 2241 aa17.13■□□□□ 0.33
SNCA-205ENST00000394991 ANO9A1A5B4 782 aa17.12■□□□□ 0.33
SNCA-205ENST00000394991 OGTO15294 1046 aa17.12■□□□□ 0.33
SNCA-205ENST00000394991 RHOBTB1O94844 696 aa17.12■□□□□ 0.33
SNCA-205ENST00000394991 DRD1P21728 446 aa17.12■□□□□ 0.33
SNCA-205ENST00000394991 GJA4P35212 333 aa17.12■□□□□ 0.33
SNCA-205ENST00000394991 AVPR1AP37288 418 aa17.12■□□□□ 0.33
SNCA-205ENST00000394991 LIG4P49917 911 aa17.12■□□□□ 0.33
SNCA-205ENST00000394991 SLC12A3P55017 1021 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms