RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 ATXN1P54253 815 aaKnown RBP6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 RPL10AP62906 217 aaKnown RBP6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 CLDN10P78369 228 aa6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 VEPH1Q14D04 833 aa6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 TMEM132AQ24JP5 1023 aa6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 ITPRIPL2Q3MIP1 535 aa6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 GLRA4Q5JXX5 417 aa6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 JADE1Q6IE81 842 aa6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 EPM2AIP1Q7L775 607 aaPredicted RBP6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 DNAJB7Q7Z6W7 309 aaPredicted RBP6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 RASSF3Q86WH2 238 aa6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 HS6ST3Q8IZP7 471 aa6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 CACTINQ8WUQ7 758 aaKnown RBP6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 CHFRQ96EP1 664 aa6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 CRISPLD1Q9H336 500 aa6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 HEBP1Q9NRV9 189 aa6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 EVLQ9UI08 416 aaPredicted RBP6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 FBXO2Q9UK22 296 aaPredicted RBP6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 PMLP29590 882 aa6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 LHX1P48742 406 aa6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 NASPP49321 788 aaPredicted RBP6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 NOP14P78316 857 aaKnown RBP6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 EHHADHQ08426 723 aa6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 UBXN2BQ14CS0 331 aa6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 MAPRE1Q15691 268 aaKnown RBP6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 VSTM1Q6UX27 236 aa6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 OR10T2Q8NGX3 314 aa6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 OLIG1Q8TAK6 271 aa6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 TMX3Q96JJ7 454 aa6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 LMAN1LQ9HAT1 526 aa6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 RXFP3Q9NSD7 469 aa6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 NUP205Q92621 2012 aa6.73□□□□□ -1.33
SMARCAD1-203ENST00000394961 TMEM8BA6NDV4 472 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 GDI1P31150 447 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 HOXD12P35452 270 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 SLC7A9P82251 487 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 GNL2Q13823 731 aaKnown RBP6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 NFIL3Q16649 462 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 MAEAQ7L5Y9 396 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 SYT13Q7L8C5 426 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 GPBP1Q86WP2 473 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 CMTM8Q8IZV2 173 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 C8orf48Q96LL4 319 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 ACCSQ96QU6 501 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 MSTO1Q9BUK6 570 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 PARD6AQ9NPB6 346 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 ARHGAP26Q9UNA1 814 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 PCDHB5Q9Y5E4 795 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 RALGAPA1Q6GYQ0 2036 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 FAM92AA1XBS5 289 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 FAM221BA6H8Z2 402 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 PP2D1A8MPX8 630 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 EXTL3O43909 919 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 PRPF40AO75400 957 aaKnown RBP6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 FAM13AO94988 1023 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 GAS6Q14393 721 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 INTS6LQ5JSJ4 861 aaKnown RBP6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 ATL3Q6DD88 541 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 PRR23CQ6ZRP0 262 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 DDX42Q86XP3 938 aaKnown RBP eCLIP6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 GCNAQ96QF7 691 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 TNMDQ9H2S6 317 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 HPS4Q9NQG7 708 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 DPP3Q9NY33 737 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 NCDNQ9UBB6 729 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 CCDC39Q9UFE4 941 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 MAPK13O15264 365 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 TADA3O75528 432 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 CPB1P15086 417 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 TNFSF9P41273 254 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 ARMCX5Q6P1M9 558 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 DSTYKQ6XUX3 929 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 USP37Q86T82 979 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 OSCP1Q8WVF1 389 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 ACDQ96AP0 544 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 OTUB2Q96DC9 234 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 CDK5RAP3Q96JB5 506 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 AGO2Q9UKV8 859 aaKnown RBP6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 CDH9Q9ULB4 789 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 MYH10P35580 1976 aa6.72□□□□□ -1.33
SMARCAD1-203ENST00000394961 KPNA7A9QM74 516 aa6.71□□□□□ -1.33
SMARCAD1-203ENST00000394961 K7ENM7 598 aa6.71□□□□□ -1.33
SMARCAD1-203ENST00000394961 PPP6R2O75170 966 aa6.71□□□□□ -1.33
SMARCAD1-203ENST00000394961 NFICP08651 508 aa6.71□□□□□ -1.33
SMARCAD1-203ENST00000394961 PLCG1P19174 1290 aa6.71□□□□□ -1.33
SMARCAD1-203ENST00000394961 ADSSP30520 456 aa6.71□□□□□ -1.33
SMARCAD1-203ENST00000394961 AP3M2P53677 418 aa6.71□□□□□ -1.33
SMARCAD1-203ENST00000394961 SATB1Q01826 763 aa6.71□□□□□ -1.33
SMARCAD1-203ENST00000394961 RESTQ13127 1097 aa6.71□□□□□ -1.33
SMARCAD1-203ENST00000394961 FSTL4Q6MZW2 842 aa6.71□□□□□ -1.33
SMARCAD1-203ENST00000394961 CACNA2D4Q7Z3S7 1137 aa6.71□□□□□ -1.33
SMARCAD1-203ENST00000394961 YAF2Q8IY57 180 aa6.71□□□□□ -1.33
SMARCAD1-203ENST00000394961 CPA6Q8N4T0 437 aa6.71□□□□□ -1.33
SMARCAD1-203ENST00000394961 IRX2Q9BZI1 471 aaPredicted RBP6.71□□□□□ -1.33
SMARCAD1-203ENST00000394961 ZSCAN16Q9H4T2 348 aaPredicted RBP6.71□□□□□ -1.33
SMARCAD1-203ENST00000394961 PCDHB13Q9Y5F0 798 aa6.71□□□□□ -1.33
SMARCAD1-203ENST00000394961 HNRNPDLO14979 420 aaKnown RBP6.71□□□□□ -1.34
SMARCAD1-203ENST00000394961 USP17L7P0C7H9 530 aa6.71□□□□□ -1.34
SMARCAD1-203ENST00000394961 GJB2P29033 226 aa6.71□□□□□ -1.34
SMARCAD1-203ENST00000394961 ATICP31939 592 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms