RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 PDZK1P1A8MUH7 402 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 EVPLLA8MZ36 301 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 NR5A2O00482 541 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 RXRBP28702 533 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 SOX6P35712 828 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 TRAF2Q12933 501 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 HLFQ16534 295 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 ZNF57Q68EA5 555 aaPredicted RBP12.75□□□□□ -0.37
SIN3A-202ENST00000394947 OOSP2Q86WS3 158 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 EPHX4Q8IUS5 362 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 MCPH1Q8NEM0 835 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 SCFD2Q8WU76 684 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 CHP1Q99653 195 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 RCOR1Q9UKL0 485 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 FHOD1Q9Y613 1164 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 ARHGEF10O15013 1369 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 A8MX80 341 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 DCAF4Q8WV16 495 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 USP13Q92995 863 aaPredicted RBP12.75□□□□□ -0.37
SIN3A-202ENST00000394947 STAMBPL1Q96FJ0 436 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 WDR24Q96S15 920 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 A2MP01023 1474 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 NUDT14O95848 222 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 MDH1P40925 334 aaKnown RBP12.75□□□□□ -0.37
SIN3A-202ENST00000394947 MTMR2Q13614 643 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 CARNMT1Q8N4J0 409 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 ZSWIM2Q8NEG5 633 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 GINS4Q9BRT9 223 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 MKNK1Q9BUB5 465 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 NFKBIZQ9BYH8 718 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 UHRF1BP1Q6BDS2 1440 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 DGKDQ16760 1214 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 TTC39BQ5VTQ0 682 aaPredicted RBP12.75□□□□□ -0.37
SIN3A-202ENST00000394947 SLC30A9Q6PML9 568 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 NSUN6Q8TEA1 469 aaKnown RBP12.75□□□□□ -0.37
SIN3A-202ENST00000394947 DNAJC9Q8WXX5 260 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 TEX13BQ9BXU2 312 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 C6orf62Q9GZU0 229 aaPredicted RBP12.75□□□□□ -0.37
SIN3A-202ENST00000394947 CCDC134Q9H6E4 229 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 TRPC4Q9UBN4 977 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 PCDHB8Q9UN66 801 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 ENO2P09104 434 aaPredicted RBP12.74□□□□□ -0.37
SIN3A-202ENST00000394947 TXNP10599 105 aaKnown RBP12.74□□□□□ -0.37
SIN3A-202ENST00000394947 GLRA4Q5JXX5 417 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 PCYOX1LQ8NBM8 494 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 WDR36Q8NI36 951 aaKnown RBP12.74□□□□□ -0.37
SIN3A-202ENST00000394947 GPRASP2Q96D09 838 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 C18orf8Q96DM3 657 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 EPN3Q9H201 632 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 GIMAP8Q8ND71 665 aaPredicted RBP12.74□□□□□ -0.37
SIN3A-202ENST00000394947 RANBP17Q9H2T7 1088 aaKnown RBP12.74□□□□□ -0.37
SIN3A-202ENST00000394947 SNX13Q9Y5W8 968 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 DYNC1LI2O43237 492 aaPredicted RBP12.74□□□□□ -0.37
SIN3A-202ENST00000394947 RTN2O75298 545 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 KATNA1O75449 491 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 C12orf60Q5U649 245 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 MTHFD1LQ6UB35 978 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 NT5DC3Q86UY8 548 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 NAGPAQ9UK23 515 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 PIK3C2GO75747 1445 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 C6orf222P0C671 652 aaPredicted RBP12.74□□□□□ -0.37
SIN3A-202ENST00000394947 HMGCS2P54868 508 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 CDH24Q86UP0 819 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 UTP15Q8TED0 518 aaKnown RBP12.74□□□□□ -0.37
SIN3A-202ENST00000394947 CINPQ9BW66 212 aaPredicted RBP12.74□□□□□ -0.37
SIN3A-202ENST00000394947 TTLL13PA6NNM8 815 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 TBX3O15119 743 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 CIAO1O76071 339 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 STAU1O95793 577 aaKnown RBP12.74□□□□□ -0.37
SIN3A-202ENST00000394947 TMEM132DQ14C87 1099 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 RCN1Q15293 331 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 ZC2HC1CQ53FD0 456 aaPredicted RBP12.74□□□□□ -0.37
SIN3A-202ENST00000394947 CLEC10AQ8IUN9 316 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 PHACTR4Q8IZ21 702 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 TTLL6Q8N841 843 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 RDM1Q8NG50 284 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 TRIM62Q9BVG3 475 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 FAM135BQ49AJ0 1406 aa12.74□□□□□ -0.37
SIN3A-202ENST00000394947 TK2O00142 265 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 TSPAN3O60637 253 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 CYP2B6P20813 491 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 SEC24CP53992 1094 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 C16orf72Q14CZ0 275 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 NEK10Q6ZWH5 1172 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 SPATA18Q8TC71 538 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 FAM167AQ96KS9 214 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 MANSC1Q9H8J5 431 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 COPS7BQ9H9Q2 264 aaPredicted RBP12.73□□□□□ -0.37
SIN3A-202ENST00000394947 PITPNM2Q9BZ72 1349 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 MEI4A8MW99 385 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 SNPHO15079 494 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 TNNI3P19429 210 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 CAMKK1Q8N5S9 505 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 ARHGEF26Q96DR7 871 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 BLOC1S6Q9UL45 172 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 CHKBQ9Y259 395 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 ZMYM3Q14202 1370 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 PDE5AO76074 875 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 P4HBP07237 508 aaKnown RBP12.73□□□□□ -0.37
SIN3A-202ENST00000394947 IFNAR1P17181 557 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms