RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 MGAT5BQ3V5L5 792 aa21.35■■□□□ 1.01
UPK3B-203ENST00000394849 SPATA1Q5VX52 437 aa21.35■■□□□ 1.01
UPK3B-203ENST00000394849 CC2D1AQ6P1N0 951 aaPredicted RBP21.35■■□□□ 1.01
UPK3B-203ENST00000394849 PKN3Q6P5Z2 889 aa21.35■■□□□ 1.01
UPK3B-203ENST00000394849 TTC9BQ8N6N2 239 aa21.35■■□□□ 1.01
UPK3B-203ENST00000394849 CCDC26Q8TAB7 109 aa21.35■■□□□ 1.01
UPK3B-203ENST00000394849 BICD1Q96G01 975 aa21.35■■□□□ 1.01
UPK3B-203ENST00000394849 RPF1Q9H9Y2 349 aaKnown RBP21.35■■□□□ 1.01
UPK3B-203ENST00000394849 IL21Q9HBE4 155 aa21.35■■□□□ 1.01
UPK3B-203ENST00000394849 SH2B1Q9NRF2 756 aaPredicted RBP21.35■■□□□ 1.01
UPK3B-203ENST00000394849 LARSQ9P2J5 1176 aaKnown RBP21.35■■□□□ 1.01
UPK3B-203ENST00000394849 EBF1Q9UH73 591 aa21.35■■□□□ 1.01
UPK3B-203ENST00000394849 ZNF638Q14966 1978 aaKnown RBP21.35■■□□□ 1.01
UPK3B-203ENST00000394849 DENND4CQ5VZ89 1909 aa21.35■■□□□ 1.01
UPK3B-203ENST00000394849 ATG2BQ96BY7 2078 aa21.35■■□□□ 1.01
UPK3B-203ENST00000394849 LACTBL1A8MY62 500 aa21.34■■□□□ 1.01
UPK3B-203ENST00000394849 SOAT2O75908 522 aa21.34■■□□□ 1.01
UPK3B-203ENST00000394849 HOXC13P31276 330 aa21.34■■□□□ 1.01
UPK3B-203ENST00000394849 NOVA1P51513 510 aaKnown RBP21.34■■□□□ 1.01
UPK3B-203ENST00000394849 CYP4F8P98187 520 aa21.34■■□□□ 1.01
UPK3B-203ENST00000394849 PDGFRLQ15198 375 aa21.34■■□□□ 1.01
UPK3B-203ENST00000394849 SLC39A12Q504Y0 691 aa21.34■■□□□ 1.01
UPK3B-203ENST00000394849 UNQ6494/PRO21346Q6UXR6 183 aa21.34■■□□□ 1.01
UPK3B-203ENST00000394849 SYT13Q7L8C5 426 aa21.34■■□□□ 1.01
UPK3B-203ENST00000394849 METTL23Q86XA0 190 aa21.34■■□□□ 1.01
UPK3B-203ENST00000394849 THEM5Q8N1Q8 247 aa21.34■■□□□ 1.01
UPK3B-203ENST00000394849 KDF1Q8NAX2 398 aaPredicted RBP21.34■■□□□ 1.01
UPK3B-203ENST00000394849 SPPL2BQ8TCT7 592 aa21.34■■□□□ 1.01
UPK3B-203ENST00000394849 ACDQ96AP0 544 aa21.34■■□□□ 1.01
UPK3B-203ENST00000394849 ZSCAN31Q96LW9 406 aaPredicted RBP21.34■■□□□ 1.01
UPK3B-203ENST00000394849 LPIN3Q9BQK8 851 aa21.34■■□□□ 1.01
UPK3B-203ENST00000394849 EDEM2Q9BV94 578 aa21.34■■□□□ 1.01
UPK3B-203ENST00000394849 ZCWPW1Q9H0M4 648 aa21.34■■□□□ 1.01
UPK3B-203ENST00000394849 DUSP15Q9H1R2 295 aaPredicted RBP21.34■■□□□ 1.01
UPK3B-203ENST00000394849 HPS4Q9NQG7 708 aa21.34■■□□□ 1.01
UPK3B-203ENST00000394849 ZZEF1O43149 2961 aa21.34■■□□□ 1.01
UPK3B-203ENST00000394849 OGTO15294 1046 aa21.33■■□□□ 1.01
UPK3B-203ENST00000394849 RNF40O75150 1001 aa21.33■■□□□ 1.01
UPK3B-203ENST00000394849 APBB3O95704 486 aa21.33■■□□□ 1.01
UPK3B-203ENST00000394849 CAVIN2O95810 425 aa21.33■■□□□ 1.01
UPK3B-203ENST00000394849 DTHD1Q6ZMT9 781 aa21.33■■□□□ 1.01
UPK3B-203ENST00000394849 BACH2Q9BYV9 841 aa21.33■■□□□ 1.01
UPK3B-203ENST00000394849 EBF3Q9H4W6 596 aa21.33■■□□□ 1.01
UPK3B-203ENST00000394849 TDP1Q9NUW8 608 aa21.33■■□□□ 1.01
UPK3B-203ENST00000394849 DERAQ9Y315 318 aa21.33■■□□□ 1.01
UPK3B-203ENST00000394849 BCLAF3A2AJT9 711 aaKnown RBP21.32■■□□□ 1
UPK3B-203ENST00000394849 ATF6P18850 670 aa21.32■■□□□ 1
UPK3B-203ENST00000394849 LIG4P49917 911 aa21.32■■□□□ 1
UPK3B-203ENST00000394849 HMGN5P82970 282 aaKnown RBP21.32■■□□□ 1
UPK3B-203ENST00000394849 CREB5Q02930 508 aa21.32■■□□□ 1
UPK3B-203ENST00000394849 ZNF268Q14587 947 aaPredicted RBP21.32■■□□□ 1
UPK3B-203ENST00000394849 ENOX2Q16206 610 aaKnown RBP21.32■■□□□ 1
UPK3B-203ENST00000394849 CCDC83Q8IWF9 413 aa21.32■■□□□ 1
UPK3B-203ENST00000394849 SYT2Q8N9I0 419 aaPredicted RBP21.32■■□□□ 1
UPK3B-203ENST00000394849 OR10T2Q8NGX3 314 aa21.32■■□□□ 1
UPK3B-203ENST00000394849 P2RY13Q9BPV8 354 aa21.32■■□□□ 1
UPK3B-203ENST00000394849 HAPLN2Q9GZV7 340 aa21.32■■□□□ 1
UPK3B-203ENST00000394849 SMOC1Q9H4F8 434 aa21.32■■□□□ 1
UPK3B-203ENST00000394849 PIRO00625 290 aa21.31■■□□□ 1
UPK3B-203ENST00000394849 HNRNPDLO14979 420 aaKnown RBP21.31■■□□□ 1
UPK3B-203ENST00000394849 EGFP01133 1207 aa21.31■■□□□ 1
UPK3B-203ENST00000394849 CEACAM1P13688 526 aa21.31■■□□□ 1
UPK3B-203ENST00000394849 CDC25AP30304 524 aa21.31■■□□□ 1
UPK3B-203ENST00000394849 ABCD1P33897 745 aa21.31■■□□□ 1
UPK3B-203ENST00000394849 TNFSF9P41273 254 aa21.31■■□□□ 1
UPK3B-203ENST00000394849 HYIQ5T013 277 aa21.31■■□□□ 1
UPK3B-203ENST00000394849 C9orf57Q5W0N0 161 aa21.31■■□□□ 1
UPK3B-203ENST00000394849 CPA6Q8N4T0 437 aa21.31■■□□□ 1
UPK3B-203ENST00000394849 MAB21L3Q8N8X9 362 aa21.31■■□□□ 1
UPK3B-203ENST00000394849 USP13Q92995 863 aaPredicted RBP21.31■■□□□ 1
UPK3B-203ENST00000394849 HHIPQ96QV1 700 aa21.31■■□□□ 1
UPK3B-203ENST00000394849 SMG9Q9H0W8 520 aaKnown RBP21.31■■□□□ 1
UPK3B-203ENST00000394849 ZMIZ1Q9ULJ6 1067 aa21.31■■□□□ 1
UPK3B-203ENST00000394849 TBX20Q9UMR3 447 aa21.31■■□□□ 1
UPK3B-203ENST00000394849 TSC2P49815 1807 aa21.3■■□□□ 1
UPK3B-203ENST00000394849 NUP205Q92621 2012 aa21.3■■□□□ 1
UPK3B-203ENST00000394849 C4orf47A7E2U8 309 aa21.3■■□□□ 1
UPK3B-203ENST00000394849 PIGRP01833 764 aa21.3■■□□□ 1
UPK3B-203ENST00000394849 HAPLN1P10915 354 aaPredicted RBP21.3■■□□□ 1
UPK3B-203ENST00000394849 CSRP1P21291 193 aaKnown RBP21.3■■□□□ 1
UPK3B-203ENST00000394849 U2AF2P26368 475 aaKnown RBP eCLIP21.3■■□□□ 1
UPK3B-203ENST00000394849 GALK1P51570 392 aa21.3■■□□□ 1
UPK3B-203ENST00000394849 NCKAP1LP55160 1127 aa21.3■■□□□ 1
UPK3B-203ENST00000394849 NLRP12P59046 1061 aa21.3■■□□□ 1
UPK3B-203ENST00000394849 RAD51AP2Q09MP3 1159 aa21.3■■□□□ 1
UPK3B-203ENST00000394849 KCNK18Q7Z418 384 aa21.3■■□□□ 1
UPK3B-203ENST00000394849 DCP1BQ8IZD4 617 aaKnown RBP21.3■■□□□ 1
UPK3B-203ENST00000394849 MRPS31Q92665 395 aaKnown RBP21.3■■□□□ 1
UPK3B-203ENST00000394849 CHFRQ96EP1 664 aa21.3■■□□□ 1
UPK3B-203ENST00000394849 MMTAG2Q9BU76 263 aaKnown RBP21.3■■□□□ 1
UPK3B-203ENST00000394849 ANK1P16157 1881 aa21.3■■□□□ 1
UPK3B-203ENST00000394849 ANO9A1A5B4 782 aa21.29■■□□□ 1
UPK3B-203ENST00000394849 OTOL1A6NHN0 477 aaPredicted RBP21.29■■□□□ 1
UPK3B-203ENST00000394849 PP2D1A8MPX8 630 aa21.29■■□□□ 1
UPK3B-203ENST00000394849 C1QTNF9BB2RNN3 333 aa21.29■■□□□ 1
UPK3B-203ENST00000394849 KHNYNO15037 678 aaKnown RBP21.29■■□□□ 1
UPK3B-203ENST00000394849 FAM189A1O60320 539 aa21.29■■□□□ 1
UPK3B-203ENST00000394849 F11P03951 625 aa21.29■■□□□ 1
UPK3B-203ENST00000394849 C1QTNF9P0C862 333 aa21.29■■□□□ 1
UPK3B-203ENST00000394849 GUCY2FP51841 1108 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms