RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 PHTF1Q9UMS5 762 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 UMODL1Q5DID0 1318 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 COQ9O75208 318 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 TJP3O95049 919 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 PSAPP07602 524 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 PIK3CAP42336 1068 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 OLFML2BQ68BL8 750 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 RNF43Q68DV7 783 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 TMEM270Q6UE05 265 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 TRIM50Q86XT4 487 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 KBTBD2Q8IY47 623 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 GPD1LQ8N335 351 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 KCTD17Q8N5Z5 321 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 SNRNP27Q8WVK2 155 aaKnown RBP10.5□□□□□ -0.73
PSEN1-204ENST00000394164 ABTB1Q969K4 478 aaPredicted RBP10.5□□□□□ -0.73
PSEN1-204ENST00000394164 ACSF2Q96CM8 615 aaPredicted RBP10.5□□□□□ -0.73
PSEN1-204ENST00000394164 IFT43Q96FT9 208 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 CYTH2Q99418 400 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 CHMP2BQ9UQN3 213 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.5□□□□□ -0.73
PSEN1-204ENST00000394164 MAPK13O15264 365 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 CSDE1O75534 798 aaKnown RBP10.5□□□□□ -0.73
PSEN1-204ENST00000394164 SRGAP2CP0DJJ0 459 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 MAPK4P31152 587 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 SFNP31947 248 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 RASSF2P50749 326 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 OVGP1Q12889 678 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 PARP6Q2NL67 630 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 TREML2Q5T2D2 321 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 LRRC74BQ6ZQY2 392 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 MTDHQ86UE4 582 aaKnown RBP10.5□□□□□ -0.73
PSEN1-204ENST00000394164 SHC3Q92529 594 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 DNAJC1Q96KC8 554 aaKnown RBP10.5□□□□□ -0.73
PSEN1-204ENST00000394164 ANKRD27Q96NW4 1050 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 MIPEPQ99797 713 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 DCLRE1BQ9H816 532 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 TMEM8AQ9HCN3 771 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 NPHS2Q9NP85 383 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 UBN1Q9NPG3 1134 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 C1orf112Q9NSG2 853 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 FBXO40Q9UH90 709 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 ASIC3Q9UHC3 531 aa10.5□□□□□ -0.73
PSEN1-204ENST00000394164 FAM187AA6NFU0 413 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 A6NJR5 290 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 THAP12O43422 761 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 PHF2O75151 1096 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 TBX10O75333 385 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 GJB1P08034 283 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 RARGP13631 454 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 RTP1P59025 263 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 CDR2Q01850 454 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 MAP3K10Q02779 954 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 CALCOCO2Q13137 446 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 EMC2Q15006 297 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 DBN1Q16643 649 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 ACSBG2Q5FVE4 666 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 C1QTNF12Q5T7M4 302 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 ACBD5Q5T8D3 534 aaPredicted RBP10.49□□□□□ -0.73
PSEN1-204ENST00000394164 CEP128Q6ZU80 1094 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 NIPA1Q7RTP0 329 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 TAB3Q8N5C8 712 aaPredicted RBP10.49□□□□□ -0.73
PSEN1-204ENST00000394164 TRAPPC9Q96Q05 1148 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 TUBGCP5Q96RT8 1024 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 HERPUD2Q9BSE4 406 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 HAPLN2Q9GZV7 340 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 ZWILCHQ9H900 591 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 ANKEF1Q9NU02 776 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 ZNF232Q9UNY5 417 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 CFAP69A5D8W1 941 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 PI4K2BG5E9Z4 385 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 ABLIM1O14639 778 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 HLA-DRAP01903 254 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 EDN1P05305 212 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 PGK2P07205 417 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 ANXA13P27216 316 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 DSG3P32926 999 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 CPA2P48052 419 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 STRN3Q13033 797 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 ALCAMQ13740 583 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 DHX34Q14147 1143 aaKnown RBP10.49□□□□□ -0.73
PSEN1-204ENST00000394164 LRRC36Q1X8D7 754 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 CFAP157Q5JU67 520 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 KAZNQ674X7 775 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 CYP4F22Q6NT55 531 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 SCARA5Q6ZMJ2 495 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 C4orf33Q8N1A6 199 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 LRRC71Q8N4P6 559 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 ENDOVQ8N8Q3 282 aaKnown RBP10.49□□□□□ -0.73
PSEN1-204ENST00000394164 OR5B17Q8NGF7 314 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 DEPTORQ8TB45 409 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 NMD3Q96D46 503 aaKnown RBP10.49□□□□□ -0.73
PSEN1-204ENST00000394164 C9orf72Q96LT7 481 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 MAGEB18Q96M61 343 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 IWS1Q96ST2 819 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 ALG13Q9NP73 1137 aaKnown RBP10.49□□□□□ -0.73
PSEN1-204ENST00000394164 DMAP1Q9NPF5 467 aaPredicted RBP10.49□□□□□ -0.73
PSEN1-204ENST00000394164 ZFP69BQ9UJL9 534 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 AGO2Q9UKV8 859 aaKnown RBP10.49□□□□□ -0.73
PSEN1-204ENST00000394164 PCDHB4Q9Y5E5 795 aa10.49□□□□□ -0.73
PSEN1-204ENST00000394164 NUMBLQ9Y6R0 609 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms