RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 AATKQ6ZMQ8 1374 aa5.92□□□□□ -1.46
GAPVD1-206ENST00000394104 GCC2Q8IWJ2 1684 aa5.92□□□□□ -1.46
GAPVD1-206ENST00000394104 IGF2BP3O00425 579 aaKnown RBP eCLIP5.92□□□□□ -1.46
GAPVD1-206ENST00000394104 TNPO2O14787 897 aaKnown RBP5.92□□□□□ -1.46
GAPVD1-206ENST00000394104 ATMINO43313 823 aaPredicted RBP5.92□□□□□ -1.46
GAPVD1-206ENST00000394104 TDP2O95551 362 aa5.92□□□□□ -1.46
GAPVD1-206ENST00000394104 PSMA4P25789 261 aaKnown RBP5.92□□□□□ -1.46
GAPVD1-206ENST00000394104 RXRBP28702 533 aa5.92□□□□□ -1.46
GAPVD1-206ENST00000394104 GPC1P35052 558 aa5.92□□□□□ -1.46
GAPVD1-206ENST00000394104 MTF1Q14872 753 aa5.92□□□□□ -1.46
GAPVD1-206ENST00000394104 CNGA2Q16280 664 aa5.92□□□□□ -1.46
GAPVD1-206ENST00000394104 DGKKQ5KSL6 1271 aa5.92□□□□□ -1.46
GAPVD1-206ENST00000394104 SLC44A5Q8NCS7 719 aa5.92□□□□□ -1.46
GAPVD1-206ENST00000394104 CATSPERBQ9H7T0 1116 aa5.92□□□□□ -1.46
GAPVD1-206ENST00000394104 TRIM10Q9UDY6 481 aa5.92□□□□□ -1.46
GAPVD1-206ENST00000394104 N6AMT1Q9Y5N5 214 aa5.92□□□□□ -1.46
GAPVD1-206ENST00000394104 FAM47DPA6NHR8 397 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 POLBP06746 335 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 PDGFRAP16234 1089 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 ZNF23P17027 643 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 PSMD7P51665 324 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 RALGDSQ12967 914 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 TRPM8Q7Z2W7 1104 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 CCDC33Q8N5R6 958 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 TTLL6Q8N841 843 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 C9orf72Q96LT7 481 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 CNGB3Q9NQW8 809 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 FBXO40Q9UH90 709 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 SNX8Q9Y5X2 465 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 PFASO15067 1338 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 DNALI1O14645 258 aaPredicted RBP5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 TRIM24O15164 1050 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 NCF4Q15080 339 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 KYNUQ16719 465 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 ZSWIM7Q19AV6 140 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 CCDC144BQ3MJ40 725 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 DCAF6Q58WW2 860 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 KLHL17Q6TDP4 642 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 FRMD5Q7Z6J6 570 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 SPATA4Q8NEY3 305 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 KAT2BQ92831 832 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 SGF29Q96ES7 293 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 FAM20AQ96MK3 541 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 CCT8L2Q96SF2 557 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 OLFM1Q99784 485 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 BPIFA3Q9BQP9 254 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 REXO4Q9GZR2 422 aaKnown RBP5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 KCTD10Q9H3F6 313 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 SERHL2Q9H4I8 314 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 SCUBE2Q9NQ36 999 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 SERHLQ9NQF3 203 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 FAM153AQ9UHL3 310 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 CRLS1Q9UJA2 301 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 PADI4Q9UM07 663 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 KCNH4Q9UQ05 1017 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 FOXN1O15353 648 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 PEX1O43933 1283 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 SKAP2O75563 359 aaPredicted RBP5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 PDE5AO76074 875 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 RARBP10826 455 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 ATP6V1B2P21281 511 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 YWHAQP27348 245 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 OR1G1P47890 313 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 LAMB3Q13751 1172 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 TOB2Q14106 344 aaPredicted RBP5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 WDR72Q3MJ13 1102 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 C10orf120Q5SQS8 335 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 TMC5Q6UXY8 1006 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 LRRC8DQ7L1W4 858 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 ZNF438Q7Z4V0 828 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 FAM136AQ96C01 138 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 MASTLQ96GX5 879 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 SH2D3AQ9BRG2 576 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 COPS7BQ9H9Q2 264 aaPredicted RBP5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 CYP39A1Q9NYL5 469 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 ADAM30Q9UKF2 790 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 PPIEQ9UNP9 301 aaKnown RBP5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 HPGDP15428 266 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 CCND1P24385 295 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 SPRP35270 261 aaPredicted RBP5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 AP3M2P53677 418 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 VSNL1P62760 191 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 GSTA3Q16772 222 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 CLEC16AQ2KHT3 1053 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 RSBN1Q5VWQ0 802 aaPredicted RBP5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 TYW3Q6IPR3 259 aaKnown RBP5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 EPHX4Q8IUS5 362 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 TTC39CQ8N584 583 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 VPS37AQ8NEZ2 397 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 L3MBTL3Q96JM7 780 aaPredicted RBP5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 KIFC1Q9BW19 673 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 VTA1Q9NP79 307 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 AVENQ9NQS1 362 aaPredicted RBP5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 BSDC1Q9NW68 430 aaPredicted RBP5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.91□□□□□ -1.464e-14■■■□□ 16.5
GAPVD1-206ENST00000394104 TRMT6Q9UJA5 497 aaKnown RBP5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 CEP170Q5SW79 1584 aa5.91□□□□□ -1.46
GAPVD1-206ENST00000394104 ZNF682O95780 498 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms