RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 SSTR3P32745 418 aaPredicted RBP25.85■■□□□ 1.73
LRFN4-202ENST00000393952 ALDH7A1P49419 539 aaKnown RBP25.85■■□□□ 1.73
LRFN4-202ENST00000393952 C9orf50Q5SZB4 431 aa25.85■■□□□ 1.73
LRFN4-202ENST00000393952 RASIP1Q5U651 963 aa25.85■■□□□ 1.73
LRFN4-202ENST00000393952 ZNF677Q86XU0 584 aa25.85■■□□□ 1.73
LRFN4-202ENST00000393952 C17orf53Q8N3J3 647 aaPredicted RBP25.85■■□□□ 1.73
LRFN4-202ENST00000393952 KIAA1524Q8TCG1 905 aa25.85■■□□□ 1.73
LRFN4-202ENST00000393952 HEXIM2Q96MH2 286 aaKnown RBP25.85■■□□□ 1.73
LRFN4-202ENST00000393952 PCDHB18PQ96TA0 734 aa25.85■■□□□ 1.73
LRFN4-202ENST00000393952 TRAPPC3O43617 180 aa25.84■■□□□ 1.73
LRFN4-202ENST00000393952 LCA5LO95447 670 aa25.84■■□□□ 1.73
LRFN4-202ENST00000393952 CFHP08603 1231 aa25.84■■□□□ 1.73
LRFN4-202ENST00000393952 TYMPP19971 482 aa25.84■■□□□ 1.73
LRFN4-202ENST00000393952 ZSCAN30Q86W11 494 aa25.84■■□□□ 1.73
LRFN4-202ENST00000393952 METTL23Q86XA0 190 aa25.84■■□□□ 1.73
LRFN4-202ENST00000393952 PHOSPHO2Q8TCD6 241 aa25.84■■□□□ 1.73
LRFN4-202ENST00000393952 LPIN3Q9BQK8 851 aa25.84■■□□□ 1.73
LRFN4-202ENST00000393952 GPR62Q9BZJ7 368 aa25.84■■□□□ 1.73
LRFN4-202ENST00000393952 DDX43Q9NXZ2 648 aaKnown RBP25.84■■□□□ 1.73
LRFN4-202ENST00000393952 DSEQ9UL01 958 aa25.84■■□□□ 1.73
LRFN4-202ENST00000393952 VWA8A3KMH1 1905 aa25.84■■□□□ 1.73
LRFN4-202ENST00000393952 ARHGEF37A1IGU5 675 aa25.83■■□□□ 1.73
LRFN4-202ENST00000393952 ACAT1P24752 427 aaKnown RBP25.83■■□□□ 1.73
LRFN4-202ENST00000393952 LHX1P48742 406 aa25.83■■□□□ 1.73
LRFN4-202ENST00000393952 FUT10Q6P4F1 479 aa25.83■■□□□ 1.73
LRFN4-202ENST00000393952 KCNT2Q6UVM3 1135 aa25.83■■□□□ 1.73
LRFN4-202ENST00000393952 ZNF558Q96NG5 402 aa25.83■■□□□ 1.73
LRFN4-202ENST00000393952 NENFQ9UMX5 172 aa25.83■■□□□ 1.73
LRFN4-202ENST00000393952 INSL6Q9Y581 213 aa25.83■■□□□ 1.73
LRFN4-202ENST00000393952 VDRP11473 427 aa25.82■■□□□ 1.72
LRFN4-202ENST00000393952 LAG3P18627 525 aa25.82■■□□□ 1.72
LRFN4-202ENST00000393952 TKTP29401 623 aaKnown RBP25.82■■□□□ 1.72
LRFN4-202ENST00000393952 SPA17Q15506 151 aa25.82■■□□□ 1.72
LRFN4-202ENST00000393952 C12orf29Q8N999 325 aa25.82■■□□□ 1.72
LRFN4-202ENST00000393952 COLGALT1Q8NBJ5 622 aa25.82■■□□□ 1.72
LRFN4-202ENST00000393952 SPATA18Q8TC71 538 aa25.82■■□□□ 1.72
LRFN4-202ENST00000393952 RTP3Q9BQQ7 232 aa25.82■■□□□ 1.72
LRFN4-202ENST00000393952 NAGPAQ9UK23 515 aa25.82■■□□□ 1.72
LRFN4-202ENST00000393952 PPP2R2CQ9Y2T4 447 aa25.82■■□□□ 1.72
LRFN4-202ENST00000393952 SF3B1O75533 1304 aaKnown RBP eCLIP25.82■■□□□ 1.721e-8■■■■■ 160.4
LRFN4-202ENST00000393952 FAM170AA1A519 330 aa25.82■■□□□ 1.72
LRFN4-202ENST00000393952 IPO7O95373 1038 aaKnown RBP25.82■■□□□ 1.72
LRFN4-202ENST00000393952 SGO2Q562F6 1265 aa25.82■■□□□ 1.72
LRFN4-202ENST00000393952 FAM171A1Q5VUB5 890 aa25.82■■□□□ 1.72
LRFN4-202ENST00000393952 OVOS1Q6IE37 1185 aa25.82■■□□□ 1.72
LRFN4-202ENST00000393952 CRYBG2Q8N1P7 616 aa25.82■■□□□ 1.72
LRFN4-202ENST00000393952 RAD9AQ99638 391 aa25.82■■□□□ 1.72
LRFN4-202ENST00000393952 PDCL3Q9H2J4 239 aa25.82■■□□□ 1.72
LRFN4-202ENST00000393952 KIAA1257Q9ULG3 409 aa25.82■■□□□ 1.72
LRFN4-202ENST00000393952 ATP2C2O75185 946 aa25.81■■□□□ 1.72
LRFN4-202ENST00000393952 CCDC175P0C221 793 aa25.81■■□□□ 1.72
LRFN4-202ENST00000393952 PSMC1P62191 440 aaKnown RBP25.81■■□□□ 1.72
LRFN4-202ENST00000393952 CCDC122Q5T0U0 273 aa25.81■■□□□ 1.72
LRFN4-202ENST00000393952 KIAA0319Q5VV43 1072 aa25.81■■□□□ 1.72
LRFN4-202ENST00000393952 ALKBH5Q6P6C2 394 aaKnown RBP25.81■■□□□ 1.72
LRFN4-202ENST00000393952 DNAAF5Q86Y56 855 aa25.81■■□□□ 1.72
LRFN4-202ENST00000393952 PASD1Q8IV76 773 aa25.81■■□□□ 1.72
LRFN4-202ENST00000393952 FIBCD1Q8N539 461 aa25.81■■□□□ 1.72
LRFN4-202ENST00000393952 IGSF21Q96ID5 467 aa25.81■■□□□ 1.72
LRFN4-202ENST00000393952 FAM49BQ9NUQ9 324 aa25.81■■□□□ 1.72
LRFN4-202ENST00000393952 TAS2R14Q9NYV8 317 aa25.81■■□□□ 1.72
LRFN4-202ENST00000393952 TMCO5BA8MYB1 307 aa25.8■■□□□ 1.72
LRFN4-202ENST00000393952 O00370 1275 aa25.8■■□□□ 1.72
LRFN4-202ENST00000393952 MED7O43513 233 aa25.8■■□□□ 1.72
LRFN4-202ENST00000393952 TLL1O43897 1013 aa25.8■■□□□ 1.72
LRFN4-202ENST00000393952 KRT83P78385 493 aa25.8■■□□□ 1.72
LRFN4-202ENST00000393952 SHHQ15465 462 aa25.8■■□□□ 1.72
LRFN4-202ENST00000393952 CCDC142Q17RM4 750 aa25.8■■□□□ 1.72
LRFN4-202ENST00000393952 SLC39A11Q8N1S5 342 aa25.8■■□□□ 1.72
LRFN4-202ENST00000393952 B3GALNT2Q8NCR0 500 aa25.8■■□□□ 1.72
LRFN4-202ENST00000393952 TNIP3Q96KP6 325 aa25.8■■□□□ 1.72
LRFN4-202ENST00000393952 SYT15Q9BQS2 421 aa25.8■■□□□ 1.72
LRFN4-202ENST00000393952 TRMT1Q9NXH9 659 aaKnown RBP25.8■■□□□ 1.72
LRFN4-202ENST00000393952 PCDHA13Q9Y5I0 950 aa25.8■■□□□ 1.72
LRFN4-202ENST00000393952 A0A0U1RQJ8 604 aa25.79■■□□□ 1.72
LRFN4-202ENST00000393952 USP27XA6NNY8 438 aa25.79■■□□□ 1.72
LRFN4-202ENST00000393952 SYN3O14994 580 aa25.79■■□□□ 1.72
LRFN4-202ENST00000393952 FGFR3P22607 806 aa25.79■■□□□ 1.72
LRFN4-202ENST00000393952 MAGEA1P43355 309 aa25.79■■□□□ 1.72
LRFN4-202ENST00000393952 YWHAHQ04917 246 aaPredicted RBP25.79■■□□□ 1.72
LRFN4-202ENST00000393952 ELAVL2Q12926 359 aaKnown RBP25.79■■□□□ 1.72
LRFN4-202ENST00000393952 CLEC16AQ2KHT3 1053 aa25.79■■□□□ 1.72
LRFN4-202ENST00000393952 CCAR2Q8N163 923 aaKnown RBP25.79■■□□□ 1.72
LRFN4-202ENST00000393952 SP7Q8TDD2 431 aaPredicted RBP25.79■■□□□ 1.72
LRFN4-202ENST00000393952 ATRIPQ8WXE1 791 aa25.79■■□□□ 1.72
LRFN4-202ENST00000393952 CYFIP2Q96F07 1278 aa25.79■■□□□ 1.72
LRFN4-202ENST00000393952 B3GALT6Q96L58 329 aa25.79■■□□□ 1.72
LRFN4-202ENST00000393952 RNPC3Q96LT9 517 aaKnown RBP25.79■■□□□ 1.72
LRFN4-202ENST00000393952 VN1R3Q9BXE9 311 aa25.79■■□□□ 1.72
LRFN4-202ENST00000393952 DNAI2Q9GZS0 605 aa25.79■■□□□ 1.72
LRFN4-202ENST00000393952 PCDHGC3Q9UN70 934 aa25.79■■□□□ 1.72
LRFN4-202ENST00000393952 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.79■■□□□ 1.72
LRFN4-202ENST00000393952 LCHNA4D1U4 455 aa25.78■■□□□ 1.72
LRFN4-202ENST00000393952 EFEMP2O95967 443 aa25.78■■□□□ 1.72
LRFN4-202ENST00000393952 PTPN1P18031 435 aaKnown RBP25.78■■□□□ 1.72
LRFN4-202ENST00000393952 PCSK1P29120 753 aa25.78■■□□□ 1.72
LRFN4-202ENST00000393952 CNGA2Q16280 664 aa25.78■■□□□ 1.72
LRFN4-202ENST00000393952 PPP1R26Q5T8A7 1209 aaPredicted RBP25.78■■□□□ 1.72
LRFN4-202ENST00000393952 DENND1BQ6P3S1 775 aa25.78■■□□□ 1.72
LRFN4-202ENST00000393952 TAS1R1Q7RTX1 841 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms